Magnolia sinica: 131226251
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Entry
131226251 CDS
T09699
Name
(RefSeq) protein transport protein SEC24 C-like isoform X1
KO
K14007
protein transport protein SEC24
Organism
msin
Magnolia sinica
Pathway
msin04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
msin00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
131226251
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
msin04131
]
131226251
Membrane trafficking [BR:
msin04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
131226251
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec23_trunk
Sec23_BS
Sec23_helical
zf-Sec23_Sec24
Gelsolin
Transposase_1
Motif
Other DBs
NCBI-GeneID:
131226251
NCBI-ProteinID:
XP_058078016
LinkDB
All DBs
Position
14:75996074..76070488
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AA seq
1060 aa
AA seq
DB search
MASPVPPRVPRPGYSPPNFNPNYQNTPNSIAENMQNLQINRPPGPPRMMPSTSVPRPPPF
VTSPFQSSAPSAPPPASFPGAAPVSRSGPPPAGIPRVGPPASGPQQVSNLASGRPSGSPF
SQHPPFGLRPPPPGAYPSAPMATGPIAPPPNVQGPTSNGPPVFAQGTLLGGPRFSSIGSI
QQPAVGPLPVGSSPMDSQPPSMRPFLGSSTSGTPLGPPPQPPLPFSAASQGMPPTSAPLY
GSQPWQMQPRQGGPLAPGTMQPPRMFGMPPGLPNQTMPPLPPGIGHPSSEAPVAGPSKID
PNQIPRPIPSSSVILFETRQYNQVNSPPPATSDYIVKDTGNCSPRYMRCTINQIPCSGDL
LATSGMPLALMVQPLAVPHPSEEPIQVVDFGESGPVRCSRCKAYINPFMKFIDQGKRFIC
NLCGFTDETPRDYYCNTAPDGRRRDADERPELCRGTVEFVATKEYMVRDPMPAVFFFLID
VSMNAIQTGATAAACSAISQAISDLPEGPRTLVGIATFDSAIHFYNLKRALQQPLMFIVP
DVQDVYTPLQTDVIVQLAECRQHLGQLLENIPTMFQNNRVAESAFGAAIKAGYLAMKSTG
GKLLVFQSVLPSVGVGSLSAREVEGRTNVTAGEKETHKLLQPADKTLKTMAIEFAESQVC
VDIFVTTQSYIDIASISVVSRTTGGQVYYYHPFSALCDSAKIYNDLKWNIARPQGLEAVM
RVRCSQGLQVQEYSGNFCKRIPTDVDLPGIDSDKTIMVTFKHDDKFQEGSECSFQCALLY
TTVYGQRRIRVQTLSLPCTTVLSNLFRTADLDTQFAGFLKQAANEIPITPLIQVREQIMN
LCINILCAYRKFCATVSSSGQLILPEALKLLPLYTLALAKSTGLRSDGRIDDRSYWVSHV
ASLSTALAIPLVYPRMMAIHNLASKEADPSLLPPTIPLSSEHVTDDGIFLLENGEDCLIY
VGNTVNPDILRQLFGVSSVEEIPMQFLLQQYDNELSKKVNDAVNEIRRQRSSYLRLRLCR
KGDSSGPLFFSYLVEDKTATGLSYVEFLVHVHRQIQTKMA
NT seq
3183 nt
NT seq
+upstream
nt +downstream
nt
atggcatctcctgtacccccgcgggtaccaagacctggctattctccccctaatttcaac
cctaattaccaaaacaccccaaattctatagcagaaaacatgcaaaatctacaaatcaat
cgcccaccaggtccaccacgaatgatgcccagtacatctgttccccgacctccccctttt
gtgacctcacccttccagtcgtctgccccttcagccccccctccagcctcctttcctggt
gcagcaccagtttcccggtctgggccaccaccagctggcatcccacgagttggtcctcct
gcatctggtcctcagcaagtatcaaatttggcatctggaaggccatcagggtcaccgttt
tctcagcacccaccttttggtttgagacccccacctcctggggcatacccttctgcccca
atggcaactggtcccattgcccccccaccaaatgtgcagggtccgacaagtaatggacca
cctgtgtttgcacaagggactttgctgggtggtccccgtttctcttccattggcagcatc
cagcaaccggcggttggacctctgccagtgggttcatcacccatggactctcagcctcca
agtatgcgcccttttctcgggagctcaacttctggtactccattgggtccgcccccacaa
ccaccccttccattttcagctgcaagtcaaggcatgcccccaacttcagctcctctatat
gggtcgcaaccgtggcagatgcaaccccggcaggggggtccactggcaccaggtaccatg
caaccgcctagaatgtttggaatgccaccgggtctaccaaatcagaccatgcctccttta
ccacctggtataggtcatccatcatctgaagctccggtagcagggccatccaaaattgat
cccaaccaaatcccacgccccattccaagttcctcggtgatattatttgagactcgtcag
tacaatcaagttaatagtcccccgcctgccacaagtgattacatcgtcaaggacactggg
aactgcagtccacgttacatgaggtgcactattaatcagattccatgctcgggtgacctt
ttggcaacttctggcatgccgttggctttgatggtgcaacctttggctgtccctcatcca
tctgaagagcctatccaagttgtggattttggagaaagcgggcctgttcgatgctctcga
tgcaaagcgtacataaatccttttatgaaatttattgatcaaggaaagcgtttcatttgt
aatttatgtggattcaccgatgagactcctcgtgactactactgcaatacagcaccagat
ggaaggcgtagagatgctgatgaaaggcctgagctttgcaggggaacagttgaatttgtt
gctacaaaggaatacatggtgcgtgatccaatgcctgctgtgttcttcttcctcattgac
gtgtcaatgaatgctatacagacaggtgcaactgcagcagcatgtagtgcaatcagccaa
gctattagtgatcttcctgaaggtcctcggacactggtgggcatcgcaacatttgactca
gctatccatttttacaacctaaaacgggcactacagcagcctttgatgtttattgttcct
gatgtacaagatgtttacacgccacttcaaactgatgtcattgttcaacttgctgagtgc
cgtcaacatttggggcaattgctggagaacattccaaccatgtttcagaataacagagtt
gctgaatctgcctttggtgcagctatcaaggctggttatttggcaatgaagtccactgga
ggaaaacttcttgtatttcaatcagttttgccatcagttggtgttggaagcctttctgct
agagaagttgaaggaagaacgaatgtgactgctggagagaaggaaacccataaattgctt
cagccagcagacaagactctgaaaacaatggcaatagaatttgcagagtctcaggtttgc
gtggacatttttgttactacccagtcatatatagacattgcttctatctctgtggtttca
aggactactgggggacaggtatattattaccaccctttttcagctctatgtgattctgcc
aaaatttacaatgatcttaaatggaacattgcaaggccacagggtcttgaggcagtaatg
cgtgtaagatgcagccagggtcttcaagttcaagagtactctggaaacttttgcaaacgc
atacccacagatgttgatcttcctgggattgacagtgacaagaccataatggtcaccttc
aaacatgatgataaatttcaggagggctccgaatgttcttttcagtgtgcccttctttac
acaacagtttatgggcaaagaagaattcgagttcagactttatcgcttccttgcacaacc
gtgctcagcaatctatttcgtacagctgatctggatactcagttcgcaggtttcttaaag
caagctgcgaatgaaattcccatcactcctctcattcaagtacgggagcaaataatgaac
ctttgcatcaacatactttgcgcctatcgtaaattttgtgcaacagtatcatcatccgga
cagctaattcttcccgaggctcttaagcttttgcctctttatacgctagcattggcaaaa
agtacagggttgcgatctgatggacggatagatgatcggtcttactgggtcagtcacgtg
gcatccctctctactgcattggctattcctttggtgtatcctaggatgatggctatccat
aatcttgcttcaaaggaagctgatccatctcttcttccaccaacaattccactttccagt
gagcatgtgactgatgatggaatctttctccttgaaaatggagaggattgtttgatttat
gttgggaacacggtgaatccagatattttaaggcaattatttggagtttcctcagttgaa
gaaattcctatgcagtttctgctgcagcaatacgacaatgagttgtcaaagaaagtaaat
gatgcggtgaatgagatacggcgccaaagatcttcctatctccgtttacggttgtgcaga
aaaggagattcatcagggcctttgttcttttcgtatttggttgaagacaagactgcgaca
ggcctctcttatgttgagttccttgtacatgtccaccggcaaatccaaactaaaatggca
tga
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