Magnolia sinica: 131246186
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Entry
131246186 CDS
T09699
Name
(RefSeq) probable pectate lyase 5
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
msin
Magnolia sinica
Pathway
msin00040
Pentose and glucuronate interconversions
msin01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
msin00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
131246186
Enzymes [BR:
msin01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
131246186
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Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
131246186
NCBI-ProteinID:
XP_058102077
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Position
5:complement(80123884..80126290)
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AA seq
411 aa
AA seq
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MASPSLSLLLFFLFSLLSPNLIFSSPSSSSPSVQDPHLVAQDVERSINASRRQLGYLSCG
TGNPIDDCWRCDPNWEKNRQRLADCGIGFGKNAIGGKNGRIYVVTDSGDDDPVNPKPGTI
RHAVIQSEPLWIIFARDMVIQLKEELIMNSYKTLDGRGASVHIANGPCITIQYVTNIIIH
GLHVHDCKQGGNAYVRDSPDHYGWRTVSDGDGISIFGGSHVWVDHCSLSNCNDGLIDAIH
GSTAITLSNNFMTHHDKVMLLGHSDSYTQDKNMQVTIAFNHFGEGLVQRMPRCRHGYFHV
VNNDYTHWEMYAIGGSAAPTINSQGNRFLAPNQRFNKEVTKREEASESEWKNWNWRSEGD
LLLNGAFFTPSGAGASSSYARASSLGARPSSLVGTITVSSGALACRKGSRC
NT seq
1236 nt
NT seq
+upstream
nt +downstream
nt
atggccagtccttccctatctctccttctcttcttcctcttctctcttctctctccaaac
ctaatcttctcttctccttcttcatcttctccatctgtccaagacccacatctcgtagca
caagatgttgaaaggagcatcaatgcatcccggaggcaattgggctacctctcatgtgga
actggcaaccccatcgacgactgctggcggtgcgaccccaactgggagaagaaccgccag
cggcttgccgactgcgggattggttttggaaagaatgcgattggtggaaagaacggcagg
atctatgtggtcacagattctggagatgatgatccagtgaatcccaagcccgggacgatc
cgccacgccgtcatccagagcgagccattgtggatcattttcgcccgtgatatggtcatc
caactcaaggaagagctgatcatgaactcatacaagacgctcgacggtcgcggagcaagt
gtccacattgccaatgggccatgcatcaccattcaatacgtgaccaacatcatcatacat
gggctccacgttcatgattgtaaacaaggtgggaatgcctatgttagggactcacctgac
cattatgggtggaggaccgtatcagatggagatgggatttccatctttggtggtagccat
gtatgggtggaccattgttcactctccaattgtaatgatggattaatagacgccatccat
ggatcaactgccatcaccttatccaacaatttcatgacccaccatgataaagtcatgctc
ctgggccatagtgattcctacacacaagacaagaacatgcaagtcacaatagcctttaat
cactttggtgaagggctcgtacaaaggatgccaagatgtagacatggatacttccatgtg
gtgaacaatgactacacccactgggagatgtatgccattggtggaagtgctgcacccact
atcaacagtcaagggaatagatttcttgcacccaatcaaagattcaacaaagaggtgact
aaacgtgaagaggcatcagagagtgagtggaagaactggaattggaggtctgaaggggat
ttactgttgaatggggccttcttcacaccatcaggcgctggagcatcatcaagctatgca
agagcttcgagcttaggagcaaggccttcttctctggtggggacgattacagtgtcgtca
ggcgcacttgcttgcaggaaaggatcacgatgctag
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