Magnolia sinica: 131247174
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Entry
131247174 CDS
T09699
Name
(RefSeq) transcription factor SPEECHLESS-like
KO
K20558
transcription factor SPEECHLESS
Organism
msin
Magnolia sinica
Pathway
msin04016
MAPK signaling pathway - plant
Brite
KEGG Orthology (KO) [BR:
msin00001
]
09130 Environmental Information Processing
09132 Signal transduction
04016 MAPK signaling pathway - plant
131247174
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
msin03000
]
131247174
Transcription factors [BR:
msin03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
HLH domain only
131247174
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
HLH
bHLH-TF_ACT-like_plant
Motif
Other DBs
NCBI-GeneID:
131247174
NCBI-ProteinID:
XP_058103586
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Position
5:complement(1161911..1165509)
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AA seq
312 aa
AA seq
DB search
MADSLSELFDHPEFCTINLAAAHSPENFFAIISTVENALFNDTVDATGLVPQISIPSSTQ
HEFEIDVQNPTSCKRRKLCVATSSEVAALDGPQRMSHITVERNRRKQMNQNLSVLRSLMP
CFYVKRGDQASTIEGVVNFIKELQHVLQFLEAKKRKKTYNEVLSPRSIPLSPRPPQLSSR
ASLPISPRTPQPTRNYDPRMHQPSLSPTMVTSHEPFFFENAVGLSANSKSLVANVEVKFS
AGSNVLLKTMSHRIPGQVLKIITALEGLSLEILHASIRTVDDTMLNSFTIKIGIECELSA
EDLAQEIQRTFC
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
atggcagacagcttatcggaactgttcgaccacccagagttctgtaccatcaacttggct
gctgcccattcccctgaaaacttctttgccatcatcagcactgtcgaaaatgctctgttc
aatgatacagttgatgcaacaggattggttccacagatatcgattccatcgagcacccaa
catgagtttgagatcgacgtccaaaacccaacttcttgcaagaggcggaagctgtgtgtt
gcgacttcttcagaagtagcagccctggacggaccgcaacggatgtcgcacattacagtg
gagaggaaccgaaggaagcaaatgaaccagaatctgtcggtcttgcgctctctgatgcct
tgtttttatgtaaagagaggagatcaagcatcaacgatcgaaggagttgtgaatttcatc
aaagagttacaacacgttctacaattcctcgaagcaaagaaacgaaagaaaacatacaat
gaagttcttagcccaagatccataccattaagcccaaggcccccacaactgagctctaga
gcaagcttacccataagtccaaggaccccacaaccaactagaaattatgaccctaggatg
catcaaccttctctctcccccaccatggttacttcacatgaacctttcttctttgaaaat
gctgtaggactcagtgcaaactcgaaatcgctggttgccaatgtggaagtgaagttttct
gcaggttcgaatgtccttctaaagaccatgtcgcataggattcctggccaggtcctgaag
ataatcaccgcccttgaaggcttgtccctcgagatactccatgcaagcatcagaacggtt
gatgataccatgctcaattcattcaccatcaagattggtattgaatgtgaactaagtgcg
gaggacctggcccaagaaattcaacgaacgttctgctaa
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