Methanosarcina siciliae C2J: MSSAC_3461
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Entry
MSSAC_3461 CDS
T03863
Name
(GenBank) Eukaryotic peptide chain release factor subunit 1
KO
K03265
peptide chain release factor subunit 1
Organism
msj
Methanosarcina siciliae C2J
Pathway
msj03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
msj00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
MSSAC_3461
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
msj03019
]
MSSAC_3461
03012 Translation factors [BR:
msj03012
]
MSSAC_3461
Messenger RNA biogenesis [BR:
msj03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
MSSAC_3461
Translation factors [BR:
msj03012
]
Eukaryotic type
Release factors
MSSAC_3461
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
eRF1_2
eRF1_3
eRF1_1
baeRF_family10
acVLRF1
PWP3A-B_C
Zn_ribbon_LysW
HEAT_DAAF5
DNA_ligase_ZBD
HypA
PLU-1
SLX1_C
DNA_topoisoIV
Motif
Other DBs
NCBI-ProteinID:
AKB38051
UniProt:
A0A0E3LDX9
LinkDB
All DBs
Position
complement(4249107..4250354)
Genome browser
AA seq
415 aa
AA seq
DB search
MAEYCTYEKYVLKKKLETLKNKSVKSAELISLYVPSDKQISDVIKHLKEEHEQASNIISK
LASNNVREALDSLLAKLRSLNKIPENGIVYFAGVVDTGANRTGMVNEVLIPPEPVVHYIY
HCDSVFYLEPLEEMLRECGTYGLILLDLREASVGMLVGKQIEAIKHLHSTVPGKQRKGGQ
SAHRFEQLRRIAIHDFYKRIGDAASEAFLELEPSDLKGILIGGHSPTKEEFYEGEFLHYE
LQKKVLGLFDTGYTDESGFSELINEAEDTLQGIDLIKQKKDMDIFFKEIATESGKVSYGE
DNVRANLEIKAVDVLLLSEELRAERVSLMCRVCGYENRRTRIWKTGEAVPAIGNCPECGS
ALEVTDLIDIVGEFSELADKGNARIAFISTDFDEGSQFMIAFGGIAAILRYSTGM
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atggctgagtactgtacatatgaaaaatatgtattaaaaaagaagcttgaaactctaaag
aataaaagtgtgaagagcgcggaattgatttccctttatgttccttctgataaacagatt
tcagatgttataaagcatttgaaagaagaacatgagcaggcttcgaacataatatccaaa
cttgccagcaataatgtacgggaagcccttgattctttgctggcaaagttaagatctctt
aacaaaattccggaaaacggaatcgtttattttgcaggagttgtcgataccggagctaac
aggacaggcatggtaaatgaagttcttattcctccggaacctgttgtacattatatatat
cactgtgattctgttttttatcttgagcctcttgaggaaatgctcagggagtgcggtact
tatgggctcatacttcttgatttaagagaagctagtgtcggaatgcttgtaggtaagcaa
attgaagctattaagcatcttcattctacggttcctggcaaacaaagaaaaggagggcag
agtgcacatcgctttgaacagctcagacgcattgctattcatgatttctacaagagaata
ggggatgctgcaagtgaggcattccttgaattagagccttctgaccttaaaggcattctt
ataggagggcattccccgactaaagaagaattttatgaaggcgaatttctacattatgag
cttcagaaaaaggttcttggcctgtttgatacagggtatacggatgaatcaggtttttct
gagttaataaatgaagcagaggatactctccagggtattgacttaattaagcaaaagaaa
gatatggacatattttttaaagaaatcgctaccgaatccggtaaagtatcttatggggag
gacaatgtaagggcaaatcttgagataaaggcggttgatgtgcttttactttctgaagag
ttgcgggctgaaagagtatctctcatgtgcagggtttgcggatatgagaatagacggaca
agaatatggaaaacaggtgaagctgttcctgcgattggaaattgtcctgaatgcggttct
gcacttgaagttacggatcttattgatatcgtgggggaattttcagaactcgcagataaa
ggcaatgcaaggattgcttttatatcaacagatttcgacgaagggtctcaatttatgata
gcttttggcggaattgctgcaatccttagatatagtacagggatgtag
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