Microbulbifer spongiae: M8T91_00835
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Entry
M8T91_00835 CDS
T10475
Symbol
hfq
Name
(GenBank) RNA chaperone Hfq
KO
K03666
host factor-I protein
Organism
mspn Microbulbifer spongiae
Pathway
mspn02024
Quorum sensing
mspn03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mspn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
M8T91_00835 (hfq)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
M8T91_00835 (hfq)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mspn03019
]
M8T91_00835 (hfq)
03036 Chromosome and associated proteins [BR:
mspn03036
]
M8T91_00835 (hfq)
Messenger RNA biogenesis [BR:
mspn03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
M8T91_00835 (hfq)
Chromosome and associated proteins [BR:
mspn03036
]
Prokaryotic type
Nucleoid associated proteins
Other nucleoid associated proteins
M8T91_00835 (hfq)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hfq
LSM
Hfq_1
Motif
Other DBs
NCBI-ProteinID:
WKD50002
UniProt:
A0ABY9ECW8
LinkDB
All DBs
Position
189567..189851
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AA seq
94 aa
AA seq
DB search
MSKGHSLQDPYLNVLRKERIPVSIYLVNGIKLQGQIESFDQFVVLLKNTVSQMVYKHAIS
TVVPSRAVRVPLLNPAAQHGGEGNAESGERESFS
NT seq
285 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaaagggcatagcttacaagacccttacctcaacgtattacgcaaagagcgtatc
ccggtttctatctatttggtcaacggcatcaagctccaggggcaaattgaatctttcgat
cagttcgtggtgttactaaaaaataccgtcagccaaatggtgtacaagcatgcaatttcc
actgtggttccatctcgcgcggttcgcgtaccgctgctgaatccggcggctcaacatggc
ggtgaaggtaatgcagaaagcggtgagcgcgaatccttcagctga
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