Methanobacterium subterraneum: BK009_05920
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Entry
BK009_05920 CDS
T05275
Name
(GenBank) DNA-directed RNA polymerase
KO
K03049
DNA-directed RNA polymerase subunit E' [EC:
2.7.7.6
]
Organism
msub
Methanobacterium subterraneum
Pathway
msub03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
msub00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
BK009_05920
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
msub03021
]
BK009_05920
Enzymes [BR:
msub01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
BK009_05920
Transcription machinery [BR:
msub03021
]
Prokaryotic type
Archaeal type
RNA polymerase
Core subunits
BK009_05920
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SHS2_Rpb7-N
S1
RNA_pol_Rbc25
Motif
Other DBs
NCBI-ProteinID:
AUB60260
UniProt:
A0A2H4VCS0
LinkDB
All DBs
Position
1246811..1247389
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AA seq
192 aa
AA seq
DB search
MYLISKIEDTVRIPPHRFEEPLNDVAIEIINEGYVGKIDKKMGLMVTVKDIEEIGVGKVI
MGDGAAYHEVVFTALFFKPELHEIVEGEVIEVTEFGAFIRIGPMDGLVHVSQVTDDYINY
DGKRGALIGKESKKTLEEGNKVRARIVALSLKGKSSKETKIGLTMRQPNLGRVEWIEAEK
KKRTKKGKKEKK
NT seq
579 nt
NT seq
+upstream
nt +downstream
nt
ttgtatttaatatccaaaatagaggacacagtgagaatcccaccccaccgctttgaagaa
cccctgaacgacgtggccattgaaattataaacgaaggttacgtgggcaaaatcgacaag
aaaatgggattaatggtcactgttaaagatatagaagaaattggtgtgggtaaagtcata
atgggtgacggagccgcctatcatgaagtggtattcactgcactgttcttcaaacccgag
ctacatgaaatcgtggaaggggaagttatcgaagtaaccgaattcggtgctttcatacgc
atagggcccatggatgggctggtgcacgtatcccaggtcaccgacgattacatcaactac
gatgggaagagaggtgccttaatcggtaaagaatccaagaaaaccctggaagaaggtaac
aaggtgcgtgcccgaatcgtggccctcagcctaaaaggtaaatcttccaaggaaaccaaa
atcggcctcaccatgagacaacccaacctgggacgggtggaatggatcgaagcagaaaag
aagaaaagaacaaagaaaggcaagaaggagaagaaataa
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