Malus sylvestris (European crab apple): 126584120
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Entry
126584120 CDS
T09027
Name
(RefSeq) nuclear-pore anchor-like isoform X1
KO
K09291
nucleoprotein TPR
Organism
msyl
Malus sylvestris (European crab apple)
Pathway
msyl03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
msyl00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
126584120
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
msyl03019
]
126584120
Messenger RNA biogenesis [BR:
msyl03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
126584120
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_MLP1_2
PUMA_CC
Motif
Other DBs
NCBI-GeneID:
126584120
NCBI-ProteinID:
XP_050104541
LinkDB
All DBs
Position
10:33566543..33582826
Genome browser
AA seq
2087 aa
AA seq
DB search
MPLFVSDEDFSRHGNDAVWVADKADAYIRDLQRELETVKAQNDAATITAEQTCSLLEQKY
LSISEEFSKLESQYAQLQSSLDSRLSEVAELQSQKHQLHLQSIGKDGEIERIKAEVSELH
KSKRQLIELVEQKDLEISEKNATIKSYIDRIVLTSDNAAQREARLSEAEAELARTKAACT
RLSQEKELIERHNVWLNDELTEKVDSLIRLRRTHADVEADLSSKLADVERQFNDCSSSLK
WNKQRVSELEAKLTSLQEELHSSKDAAAANEDRLTAELSTLNKLVELYKESSEEWSKKAG
ELEGVIKALETHLNQVKNDYKEKLERVESARNQFEKEAADLKAKLEKCEAEIEASRKSNE
LNLLPLSSFSTEAWMNSFESPDIIEADRVVVPKIPAGVSGTALAASLLRDGWSLAKMYAK
YQEAVDAFRHEQLGRKESEAVLQRVLFELEEKAEVILDERVEHERMVEAYSMINQKLQNS
ISEQAYLEKTIQDLKAEVRKHERDYTFARKEIADLQREVTILLKECRDIQLRGISSGHDS
HDYGTVAAIEMNTESDAERVITEHLLTFKDINGLVDQNMQLRSLVRNLSDRLENREMEFK
ENFEMEIKKHNDEAASRVAAVLQRAEEQGRMIESLHASVAMYKRLYEEEHKLYSSGPRIE
EAAPEERRSDVKLLLESSQEATRKAQDQAAERVKCLEEDLAKTRSEIISLRSERDKLALE
ANFSRERLESFMKEFEHQRNETNGVLARNIEFSQLIVDYQRKLRESSESVQTAEERTRKL
TMEVSVLKHEKEMLEHAEKRACDEVRCLTERVHRLQASLDTIQSAEEIREEARAAERRRQ
EEYTKQIEREWADVKKDLQEERNNARTLTLDREQSIQNAMRQVEEMGKELANALHAVASA
ETRAAVAEAKLTDLDRRSKSSDVKVVDVDGGSVSSSLTSDEALVALRAAKEEIEKLREEV
QANKDHMLQYKSIAQVNEDALRQMESAHENFKIEAEKLKKSLETELLSLRERVSELEHEC
SLKSQEVASAAAGKEEALSSTLSEIISLKEETSTKISQIVSLEIQISALKEDLEKEHQRW
RSAQANYERQVILQSETIQELTKTSQALATLQEEASELRKLADALKSENNELKSKWEFDK
GMLEESKNVAEKKYNEINEQNKILHSQLEALHIQMTERDRGSVGTSASTAPDTSGDAGLQ
NVISYLRRTKEIAETEISLLKQEKLRLQSQLESALKASETAKSSLHAERTNSRSLFTEEE
MKSLQLQVREINLLRESNIQLREENKHNFEECQKLREISQKANAETENLERLLQERQIEL
EACKKEIEMQKSEKEHSEQRVRELLERYRNIDVQDYERTKEDVRQLQKKLEEKDSQIVEV
KKLLSEKLETVSRLERDIANSRLELTEMEKRMSDALQVEASLKSDIEKQRKMTAQYKRRL
EMFSREKETLSKEKETLSKEKEELSKENQALSRQLEELKLAKRASGDTTGEQAIREEKDQ
KIQLLEKHLERQREELRKEKDENRMEKAMRKKMEKAVKDSYTNVDQDKTKFMNELEKHKQ
ALKQLSDELEKLKHAKDSLPEGTSIVQLLSGTILDGLAAAYSLAVENFEKTAHSVHNEFG
AHGVLANTPPVADTSLVATSGTAQAPTVVPSMSPAKGLVSKATEESAKRITLPKTNVETR
KPGRRLVRPRLIRPEEPQGDVEMSEMEGTRNGGKQAPSNEMEVQGNATLTQPLLRKRLAS
SSTSESREESNNQGEICPDVAAPVSKKSKGSDSPQGSEGQPSTISENLGSIPVKDEPLDV
AVDLPQGSNEEAAVDAEKEETETAGEKVEEPNERQFDGSSQVESQPEKDSDLVENVDGKD
MPSHDGAKDQVELEQQSSDFGGDREEGELVPDISELEGGGDTMASPEIGEVQPEPVTTPE
ASPARGDDYGVAAGSVVDISEVNYPEILNDDIDATEETADGSDKSIDGNDQTAMETDQAA
EATSVIVDTTSTGTTSEVSVSKQTSPSLAAEEVRQVSPVTNPSTTINITERAVANARRRQ
QARGLSTSPSPGRGGPAGRQGGRPGRAPPGRGRGRGRSRGSTSGDQG
NT seq
6264 nt
NT seq
+upstream
nt +downstream
nt
atgccgcttttcgtctccgacgaggacttctcccgccacggcaacgacgccgtttgggtg
gcggacaaggccgacgcctatattcgggacctgcagagggagctagagaccgtcaaggcc
cagaacgacgctgctaccatcacggccgagcagacctgctccctcctcgagcagaagtat
ctctccatctccgaagaattctccaagctcgagtctcaatacgcccagcttcagtcctcc
ctcgacagccgcctctctgaggtcgccgagctccagtcccagaagcaccagctccatctc
caatccattgggaaggatggggagatagagaggattaaggcggaggtgtcagaattgcac
aaatcgaagaggcagttgatagagttggtggagcagaaggacttggagattagtgaaaag
aatgccaccatcaagtcttatatcgacaggattgtattaacttctgacaatgccgctcaa
agggaggctcgtttgagcgaagccgaggcagaattagcacgcaccaaggctgcatgtact
cgtctatcacaggagaaagaacttattgaaaggcataatgtctggcttaatgacgagtta
acagagaaagttgacagtctcattcggcttcgtagaacgcatgctgatgttgaggcagat
ttgtcttctaaacttgcagatgttgagagacaattcaatgattgctctagctctttaaaa
tggaacaagcaaagagtgagcgaattagaagccaagctaacgtctttacaggaggagctg
cactcatctaaagatgctgctgcagccaatgaagatcgattaactgctgaactctcaaca
ttaaataagcttgttgaactatacaaagaaagttctgaggaatggtccaaaaaggcagga
gagcttgaaggtgtgatcaaggctttggagacacatttgaatcaagtgaaaaatgattac
aaggaaaaacttgaaagggtagagtctgcaagaaatcaatttgagaaggaagcagcagat
ctgaaagcgaaacttgaaaaatgtgaagcagaaatcgaagctagcaggaaatcaaatgag
cttaatcttcttccactcagtagttttagcacggaagcatggatgaattcatttgaatcc
cccgacattatagaggctgatcgagtagttgtcccaaagattcctgctggtgtttcagga
acagcattagcagcttcacttctgcgggatggctggagtcttgcaaaaatgtatgcgaag
taccaagaggctgttgatgcctttcgtcatgagcagttgggaaggaaggaatctgaggca
gtcttgcaacgggttctatttgaattggaggagaaagcggaagtcattttagatgaaaga
gttgaacatgagagaatggttgaggcatattctatgatcaaccagaaattgcagaactcg
atttctgaacaggcatacttggagaagaccatccaggacttaaaggctgaggtaaggaag
catgagcgtgactacacgtttgcacgaaaagagattgctgatctccagcgagaggtgaca
atccttctgaaggaatgccgtgatatacagcttcgtgggatatcatctggtcatgatagt
catgactatggtactgttgccgctattgagatgaacactgaatctgatgctgagagggtc
ataactgaacatcttttgaccttcaaggacataaatggactagttgatcagaatatgcag
ctcaggagccttgttcgcaatctttctgaccggcttgaaaatagggaaatggagttcaag
gagaattttgaaatggagataaagaaacacaatgatgaagctgcctctagagttgcggca
gtgttacaaagagctgaagagcaagggcgcatgattgaatcccttcacgcctctgttgca
atgtacaaaaggctatatgaagaggagcataaactttattcgtctggtcctcgtatagaa
gaggctgctccagaagaaaggagatctgacgtaaagcttctccttgagagttctcaggaa
gctacaagaaaggcccaagaccaggctgcagaacgagtgaaatgtctggaggaagatctg
gcaaagaccaggagcgagatcatatctttgcggtcagagcgtgacaagttggctttggaa
gcaaatttttctcgagagagacttgagagctttatgaaggaatttgagcatcagagaaat
gaaacaaatggtgttttagcaaggaacattgagttctctcagttgatagttgactaccaa
cgaaagctgcgtgaaagttctgaatctgttcaaactgctgaggagcgtactaggaagttg
actatggaggtgtctgttttgaagcatgaaaaggaaatgttggaacatgctgagaagcga
gcttgtgatgaagttcgttgtttgacggaaagggtccatagactgcaggctagcttggac
actattcagagtgccgaggaaattcgtgaggaggcaagagctgctgagaggagaagacaa
gaagagtatacgaaacaaatagagagggagtgggctgatgtcaagaaagatctacaagaa
gagcgaaacaatgcccgcactctcacacttgaccgtgagcagtccatacaaaacgccatg
agacaagttgaagaaatgggaaaagagttggctaatgctttgcatgctgttgcatctgct
gagactagagctgctgtagctgaggctaaactgaccgatctggacagaaggagtaaatcc
tcggatgtgaaggttgttgatgtcgatggtgggagtgtgtcttcctccttgacaagtgat
gaggctttggtggcattgcgtgctgcaaaggaagagattgaaaaattgagagaggaagtg
caagctaacaaggatcacatgctacagtataagagcatagctcaggtaaacgaagacgca
ttgagacagatggaatctgcccatgaaaacttcaagattgaggctgaaaaactgaagaaa
tcgcttgaaaccgaacttctttctctaagagagagagtatctgaacttgaacacgagtgt
agtttgaagtctcaagaagttgcttcagcagctgcagggaaggaagaagctctttcttcc
actctatcagaaattataagtctaaaggaagaaacctcaactaaaatttcccaaattgtg
tcactggagattcagatatctgctttgaaagaagacttggagaaagaacatcagcgatgg
cgttctgctcaggccaattatgaaagacaggttatcctccagtcggagacaatacaggag
ttgactaagacatcacaggctttggctacgctccaggaagaagcgtcagagttgcgtaaa
ttggctgatgcactcaaaagtgaaaataatgaactcaagtctaagtgggaatttgataag
ggaatgctagaagaatccaaaaatgttgccgagaagaagtacaatgaaatcaatgaacag
aacaaaatactgcacagtcaacttgaggctttgcacattcaaatgactgaaagagatcgt
ggttcagttggaacttctgcaagcactgctccagatacttctggtgatgctggtttacaa
aatgtgataagttatcttcgacggacaaaagaaattgcagagacagagatttccttattg
aaacaagaaaaacttcgattacagtcacaacttgagagtgccctcaaggcttcagaaaca
gccaagtcatcacttcatgctgagcgcacgaattcaagatcattgttcacggaggaggaa
atgaaatccttgcaactacaggttagagaaattaacttacttcgtgaaagcaatatccaa
ctcagagaagaaaacaagcacaattttgaggaatgccagaaattgcgtgaaatatcacaa
aaagctaatgctgagactgagaacctagagagattgctacaggagagacagattgagttg
gaagcctgtaagaaagaaattgaaatgcaaaagtcagagaaagaacactcagaacagagg
gttcgtgagctgcttgaaagatatagaaacattgatgttcaagattatgaacgcacaaag
gaggatgttcgtcagttgcagaaaaaattggaggagaaggattctcaaatagtagaagtc
aagaaacttctttcagaaaagttggagactgtatcacgtctggagcgagatattgctaac
tccagattggaactgactgagatggagaagagaatgagtgacgctttgcaagttgaggca
agtctaaaatcagatatcgagaagcaaaggaagatgactgctcagtataagaggaggctt
gaaatgttctcaagagaaaaagagaccctttcaaaagaaaaggagacactatcaaaggaa
aaggaagaactgagcaaggagaatcaagctctttctagacagctggaggaactcaaatta
gcgaaacgagcatcaggggatactaccggggagcaggcaattagggaagagaaagaccag
aaaattcagcttctggaaaagcatttggagaggcagagagaggagctgagaaaggagaag
gacgaaaatcgtatggagaaagcaatgcgcaagaagatggagaaggctgtaaaggattcc
tacactaatgttgaccaggacaagacgaagttcatgaatgaacttgagaagcataagcag
gctctgaagcagctttcagatgagcttgaaaagctaaaacatgcaaaagacagtctccct
gagggcacctcaattgttcaactgctatcgggaaccatactggatggtcttgctgctgcc
tacagcttagctgtcgaaaattttgaaaagacagcacattcagttcacaatgagtttgga
gctcacggtgttctggcaaacactcctccagttgcagatacttcattagtggctacctct
ggtactgctcaagcacccactgttgtgccttcaatgagtcctgcgaagggcttagtatcc
aaagcgactgaagaaagcgcaaagagaatcactttgcccaaaaccaatgtcgaaactcgc
aaaccaggaaggagattggttaggccccgtcttataagacctgaagaaccacaaggtgat
gtagagatgtcagagatggaagggacccgcaatgggggcaaacaagcgccatcaaatgaa
atggaagttcaaggcaatgctactttgacacaaccgctgcttcggaaacgtctggcttct
tcatctacttctgagtcccgtgaggaatcaaataatcaaggggaaatttgtcctgatgtg
gcagcacctgtgtcaaagaagtccaaaggttcagattctccacaggggagtgaagggcag
ccatctactatttcggagaatcttgggagtattccagtcaaagatgaacctttagacgtc
gctgttgatttgccgcaaggttcaaatgaggaagctgctgttgatgctgagaaagaagaa
actgagactgctggggagaaggttgaagagccaaatgaaagacagtttgatggttcgagt
caagttgaatcacaacctgagaaggatagtgatttagtggagaatgtggatggaaaagat
atgccatcacacgatggagccaaagatcaggttgagctggagcaacagtccagtgatttt
ggaggagaccgagaagagggagagctggtccctgatatttctgagcttgaaggtggtggt
gatacgatggccagtcctgaaataggggaagttcaacctgaacctgtaacaactcccgag
gcttccccagctaggggcgatgattatggtgttgctgctggttctgttgtggatatcagt
gaggttaattatccagagattcttaatgatgacattgatgcaactgaagaaaccgctgat
ggttccgataagtcaattgatggtaatgaccaaactgcgatggagactgatcaggctgcc
gaagctacctcagtaatcgtggataccacttcaacaggtaccacatcggaagttagcgtt
tcaaaacaaactagtcccagtcttgcggcagaagaggtgagacaggtgtctccagtgacg
aatccgtcaactaccataaatataacagaacgagccgtggcgaatgcacgtcgaagacaa
caggcaagagggctttcgacatcaccaagcccaggtcgtggtggaccagctggaagacaa
ggtgggagacctggacgtgcccctcctggacgcggacgcggacgtggacgatctcgtggg
tcaacatctggcgatcaagggtga
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integrated database retrieval system
