Malus sylvestris (European crab apple): 126596067
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Entry
126596067 CDS
T09027
Name
(RefSeq) protein transport protein SEC23-like isoform X1
KO
K14006
protein transport protein SEC23
Organism
msyl
Malus sylvestris (European crab apple)
Pathway
msyl04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
msyl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
126596067
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
msyl04131
]
126596067
Membrane trafficking [BR:
msyl04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
126596067
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Sec23_trunk
Sec23_helical
Sec23_BS
zf-Sec23_Sec24
Gelsolin
Tox-MPTase4
Motif
Other DBs
NCBI-GeneID:
126596067
NCBI-ProteinID:
XP_050118489
LinkDB
All DBs
Position
13:38334900..38342332
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AA seq
779 aa
AA seq
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MSEMANTDPEGIDGVRMSWNVWPRTKVEASKCVIPLAACISPIRSHPDIPTLPYAPLRCK
TCSAVLNPFARVDFTAKIWICPFCYQRNHFPPHYAAISETNLPGELYPQYTTLQYALPTD
SAAPQSLPSPVFVFVLDTCMIEEEMEYVKSALKRAIGLLPDNALVGFVSYGTQVQVHELG
FSDLSKVYVFRGSKEISKEQVLEQLGLSVLGRRPGPIGGGGYQPKGVQMGIPNAGVTRFL
LPASDCEYTLNTLLDELQTDQWPVPQGSRASRCTGVALSVAAGLLGACLPGTGAHIVALV
GGPCTEGPGAIVSKDLSDPVRSHKDLDKDAAPYFKKAIKFYENLAKQLVSQGHVLDLFAS
ALDQVGVAEMKVAIERTGGLVVLAESFGHSVFKDSFKHVFEEGEQSLGLCFNGTLEINCS
KDIKIQGVIGPCTSLEKKGPAVADTAIGEGNTTAWKMCGLDRSTCLTVFFDLSSSDQSNT
PGTVNPQLYLQFLTSFFLNCSFQNPEGQMMLRVTTITRRWIDSSVSPEELVQGFDQETAA
VVMARKTSLKMESEESFDATRWLDRGLIRLCSKFGDYRKDDPSSFTLNPCFSLFPQFMFN
LRRSQFVQVFNNSPDETAYFRMLLNRENISNAAVMIQPSLISYSFNSLPQPALLDVASIA
ADRILLLDSYFSIVIFHGMTIAQWRNMGYQNQPEHQAFAQLLQAPHDDTQLIVRDRFPVP
RLVVCDQHGSQARFLLAKLNPSATYNNAHEMAAGSDVIFTDDVSLQVFFEHLQRLAVQS
NT seq
2340 nt
NT seq
+upstream
nt +downstream
nt
atgtcggagatggcgaacacagacccggaagggatcgacggagttcggatgagctggaac
gtctggccacgcaccaaggtggaggccagcaagtgcgtgatcccactggccgcctgcatc
tccccgatccggtcccaccccgacatccccacgctcccctacgcgccgctccgctgcaag
acctgctctgccgtgctgaacccctttgcgcgcgtcgacttcaccgccaagatctggatc
tgccccttctgctaccagcgcaatcacttcccgcctcactacgccgcgatctctgagacc
aatctccctggtgagctctaccctcagtacaccaccctccaatacgctctgccgactgat
tccgccgcccctcaatctctgccgtccccggtttttgtcttcgtgctcgacacgtgtatg
atcgaggaggagatggaatatgtcaaatcggcgctcaaaagggcaattgggttgctgccc
gataatgcgcttgttgggttcgtttcgtatggaacccaagttcaggtccatgaattgggg
ttctctgatttgtcgaaagtgtatgtctttcggggtagtaaggagatttcaaaggaacaa
gttttggagcaattgggtctcagcgttcttggtcggagacctggtccaattggtggcgga
gggtaccagccgaagggggtgcaaatgggaattcccaatgctggtgtaacccgctttttg
ttgcctgcttcggattgcgaatacacactgaacacgctgttggatgaattgcaaacggac
cagtggcctgtgccacaaggaagtcgtgcttccaggtgcacaggagtggcgttgagtgtt
gctgcagggttacttggagcttgtctacctggaactggggctcacattgtagctttggtt
ggcggtccatgcactgaggggcctggcgcgattgtatcgaaagatttgtcagacccagta
cgttcccataaagatctagataaggatgcggcaccgtactttaagaaagcaatcaagttt
tatgaaaatcttgcaaaacagctggttagccaaggccatgtcttagacctgtttgcatct
gcactcgatcaggttggggttgcagaaatgaaagttgcaattgaaagaactggtgggctt
gttgttctagcagaaagttttggtcattctgtattcaaagactctttcaagcatgttttt
gaagaaggggaacaatcgcttggcctatgtttcaatggtacacttgagatcaactgttcg
aaggacataaaaattcagggggtcattggaccctgcacttctttggagaagaaaggacct
gctgttgctgatactgctataggggagggaaatacaacagcttggaaaatgtgtggcctt
gacaggagtacttgcttgacagttttctttgatctctcgtctagtgatcagtcaaataca
ccaggaactgtaaatccacaattgtatctgcagtttcttacaagtttctttcttaattgc
agctttcaaaaccctgaaggtcaaatgatgcttcgagtaacaacaatcactagacgatgg
atagatagttccgttagcccagaggaattggttcaaggatttgaccaagagactgctgct
gtagtgatggcaagaaaaacttccttgaaaatggagtcagaggaatcttttgatgctaca
cgatggttggatcgaggacttattcgcctctgttcgaaatttggtgactatcgaaaagat
gatccatcatcctttactttaaatccctgtttctcattattccctcaatttatgtttaac
ctccgacgctcacaatttgtgcaggttttcaacaacagcccagatgaaactgcatatttt
cgcatgttgttaaatcgggaaaatatcagcaatgctgctgtcatgatacaaccatcatta
atatcatattcatttaattcgctgcctcagccagcattgttggatgtggcatccattgca
gctgaccgtattctcttgttggattcatattttagtatagtcattttccatggaatgaca
atagcacagtggcgtaacatgggataccagaatcagccagaacaccaggcatttgcacaa
ctactgcaagctcctcatgatgatacacaattgattgttcgggaccgtttccctgtccct
agattggtggtgtgcgatcagcatggttcccaggcaagattcttgttagcaaagttaaac
ccatcagcaacatacaacaatgcccatgaaatggccgccggttcagatgtaatcttcacg
gacgatgtgagccttcaagttttctttgagcatcttcagaggctggctgtacaatcctga
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