Malus sylvestris (European crab apple): 126600211
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Entry
126600211 CDS
T09027
Name
(RefSeq) uncharacterized protein LOC126600211
KO
K12869
crooked neck
Organism
msyl
Malus sylvestris (European crab apple)
Pathway
msyl03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
msyl00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
126600211
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
msyl03041
]
126600211
03036 Chromosome and associated proteins [BR:
msyl03036
]
126600211
Spliceosome [BR:
msyl03041
]
Complex B
Other components
Prp19-related factors
126600211
Complex C
126600211
Chromosome and associated proteins [BR:
msyl03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Other centrosome duplication proteins
126600211
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HAT_PRP39_C
HAT_PRP39_N
HAT_Syf1_CNRKL1_N
HAT_Syf1_CNRKL1_C
HAT
TPR_14
Suf
TPR_19
TPR_16
TPR_2
TPR_CcmH_CycH
TPR_8
HAT_Syf1_M
TPR_17
Mad3_BUB1_I
RAB3GAP2_C
ARM_TT21
NblA
U3_assoc_6
Motif
Other DBs
NCBI-GeneID:
126600211
NCBI-ProteinID:
XP_050122732
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All DBs
Position
14:18148260..18157694
Genome browser
AA seq
705 aa
AA seq
DB search
MGSYKDADPSLGFLTRKDTEVKLPRPTRVKNKTPAPVQITAEQILREARERQEAEIRPPK
QKITDPTELADYRLRKRKEFEDLIRRVRWNVSVWIKYAQWEESQKDFKRARSVWERALEV
DYRNHTLWLKYAEVEMKNKFINHARNVWDRAVTLLPRVDQLWYKYIHMEEIIGNVAGARQ
IYERWMNWMPDQQGWLSFIKFELRYNEVERARAIFERFVQCHPKVGAWIRFAKFEMKNGE
VARARNVYERAVEILADDEEAEQLFVAFAEFEERCKETDRARCIYKFALDHIPKGRADDL
YKKFVGFEKQYGDRQGIEDAIVGKRRFQYEDEVRKNPLNYDAWFDYIRLEESAGNKDRIR
EVYERAIANVPPAPEKRYWQRYIYLWINYALYEELDASDTERTRDVYKEFLNLIPHQKFS
FAKIWLLAAQFEIRQLNLKGARMILGNAIGKAPKDKIFKKYIEIELNLGNMDRCRKLYEK
YLEWSPENCYAWTKYAELEQSLCETERTRSLFELAIAQPSLDMPELLWKAYIDFEISEGE
FERTRELYERLLDRTKHLKVWISYAKFEASAIVEDGVDSDMAKDQAQDYLLEQKKQCLLR
ARSVFEKAVNYFRTSAPELKEERGMLLEEWLNMEASFGDLGDVSLVQSKLPKKLKKRRPI
MTEDGPAGYEEYIDYMFPEEAQTTNLKILEAAYKWKRQKVSSDED
NT seq
2118 nt
NT seq
+upstream
nt +downstream
nt
atgggctcctacaaggacgcagacccatccctagggttcctaacccgaaaggacaccgag
gtcaagctcccacgacccactagggttaagaacaaaaccccagcccctgtccagatcact
gcagagcaaattcttcgggaggcacgtgagcgtcaggaggctgaaatccgacctcccaaa
cagaagatcactgatcccactgagcttgctgattaccgcctccgtaagcgcaaggaattc
gaggacctaatccggcgtgtgaggtggaatgtcagtgtatggatcaagtatgcgcaatgg
gaggagtcccagaaggacttcaagcgtgctcgctctgtttgggagcgtgctcttgaggtc
gattatcggaaccacaccctgtggcttaagtatgctgaggtggagatgaagaacaagttc
attaaccatgcaagaaacgtgtgggaccgtgctgtcacactcttgcccagagttgaccag
ctctggtacaagtacattcacatggaagagattatagggaatgtggccggtgctcgacag
atatacgagaggtggatgaattggatgccggaccagcaaggttggctctccttcatcaag
tttgagcttcgctataatgaagtggagcgtgctagagcaatttttgagcggtttgtgcaa
tgtcatccaaaagttggtgcttggattcggtttgccaaatttgagatgaagaatggtgag
gttgcgagggcaagaaatgtgtatgagagagcggtggagatcctagccgatgacgaggag
gctgagcagttatttgtggctttcgctgaattcgaagagcggtgcaaagaaactgatcga
gcaaggtgtatttataagtttgcacttgatcatatacccaagggaagggccgatgacttg
tataagaagtttgtgggtttcgagaagcagtatggagatagacaaggcattgaggatgca
attgtgggaaagaggaggtttcagtatgaggatgaggttaggaagaaccctcttaattat
gatgcgtggtttgattatataaggctagaagagagtgcagggaataaggatagaattaga
gaagtttatgagcgagcaattgctaatgttcctccggctccggagaagcgatattggcaa
cgatacatttatttatggattaactatgcactctacgaggagcttgatgcttcagacacg
gaacgtacacgagatgtgtataaggagttccttaatctgattcctcaccagaagttttcg
tttgcaaaaatatggctccttgctgcccagtttgaaatacggcagctgaatctcaagggt
gcacgaatgatccttggcaatgcaataggcaaggcacctaaagataagatatttaagaag
tatattgagatcgagctgaaccttgggaatatggatcgatgtcggaagttgtacgaaaag
tatctggagtggtccccagaaaattgttatgcatggacgaagtatgcagagttagagcaa
tctttatgcgagacagaacgaaccaggtcgctttttgaacttgcaattgcccaaccatca
cttgacatgcctgagttgttgtggaaggcatacattgactttgaaatatcagagggtgaa
tttgagagaactagagaactttacgagagactcctagaccgaacaaaacacctaaaggtg
tggatcagttatgcgaaatttgaggcgtctgctatagtggaagatggtgtggattcagat
atggccaaagaccaagcccaggattatcttcttgaacagaagaaacaatgtcttctccgt
gctcgaagtgtttttgagaaagctgttaactactttagaacttcagcacctgagttgaag
gaagaaagaggtatgttgctcgaagagtggttgaacatggaggcgagctttggagatttg
ggtgatgttagcttagtccaatctaagcttccaaagaaactgaagaagaggaggccaata
atgaccgaagacggccctgctgggtacgaggaatatattgattacatgttcccggaggaa
gctcagacgacaaatctcaagatattggaagctgcctacaagtggaagaggcaaaaggtg
tcttctgatgaggactag
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