Malus sylvestris (European crab apple): 126600804
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Entry
126600804 CDS
T09027
Name
(RefSeq) pachytene checkpoint protein 2 homolog
KO
K22399
pachytene checkpoint protein 2
Organism
msyl
Malus sylvestris (European crab apple)
Brite
KEGG Orthology (KO) [BR:
msyl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
msyl03036
]
126600804
Chromosome and associated proteins [BR:
msyl03036
]
Eukaryotic type
Centromeric chromatin formation proteins
SAC (spindle assembly checkpoint) factors
Others
126600804
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_lid_TRIP13_C
TRIP13_N
AAA
AAA_16
AAA_22
nSTAND3
AAA_18
AAA_14
NACHT
AAA_28
NPHP3_N
AAA_7
AAA_5
Viral_helicase1
DUF815
AAA_30
RNA_helicase
TIP49
Cytidylate_kin
TsaE
RuvB_N
AAA_24
AAA_11
ABC_tran
ATPase_2
AAA_33
AAA_2
AAA_17
IstB_IS21
Rad17
bpMoxR
KAP_NTPase
nSTAND1
AAA_19
PduV-EutP
AAA_3
NB-ARC
SLFN-g3_helicase
Mg_chelatase
AAA_13
Cytidylate_kin2
ResIII
nSTAND6
Sigma54_activat
NTPase_1
Motif
Other DBs
NCBI-GeneID:
126600804
NCBI-ProteinID:
XP_050123417
LinkDB
All DBs
Position
14:complement(24476796..24480326)
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AA seq
457 aa
AA seq
DB search
MSAPSPMDVSMQNPQDVDVPDQNGAVAIDSAPSPILPQDKVLVSVEVSLKPSSTARADDV
RSAVERMLEKRSLSYTDGPVPVPLDDQFLTENVQRICICDTDEWVQNHDILLFWQVKPVV
HVFQLSEEGACEDVSGDGQPSTFNEWILPANEFDGLWESLIYESGLKQRLLRYAASALLF
TEKGVNPFLVSWNRIVLLHGPPGTGKTSLCKALAQKLSIRFNSRYPQCQLIEVNAHSLFS
KWFSESGKLVANLFSKIQEMVEEESNLVFVLIDEVESLAAARKAALSGSEPSDSIRVVNA
LLTQLDKLKSAPNVIILTTSNITAAIDIAFVDRADIKAYVGPPTLQARYEILRSCLHELI
RTGILSHLEDCDSMLPNFASLREKLNMPEVQDAQTPLHLCKQLFETAEACEGLSGRSLRK
LPFLAHAALANPYCCDPSKFLSTMTDTARRERSELPD
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
atgagcgctcccagtcccatggacgtctctatgcaaaacccccaagacgtcgatgtccca
gaccaaaacggcgccgtcgcaatagactcagctccttctcccattcttccccaagacaaa
gtcctcgtttcagtggaagtcagcctcaagccctccagcacagctcgggctgatgatgtg
cggtctgctgtagagagaatgcttgaaaagaggagtctgagctacactgacggacctgtg
ccggtgccgcttgatgatcagtttctgacagaaaatgtgcaaagaatctgtatttgtgac
acggatgagtgggtgcaaaaccatgacatccttttgttctggcaagtgaagcctgttgtg
catgtttttcagcttagcgaagagggagcatgtgaggatgtaagtggggatggacaacct
tccaccttcaacgaatggattcttcctgcaaatgaattcgatggcttgtgggaaagttta
atttatgaatcaggtctcaagcaaaggttgctgcggtatgcggctagtgcattgcttttc
actgagaagggcgtcaatcctttccttgtgtcatggaatcgcattgttcttttacatgga
cctccagggactggaaaaacttctctatgtaaagcgctggctcaaaaactatccattcgg
tttaactccagatacccacaatgccagttgattgaagttaatgcacattctttgttcagt
aaatggttctctgagagtggcaagttggttgcaaatcttttctcaaaaattcaggagatg
gtagaggaggaaagcaatctggtatttgttttgattgatgaagttgaaagccttgctgct
gctagaaaagctgctttatctggctccgaaccttcagattctattcgggtagtgaatgcg
ctactaactcagctggataaattgaaatcagcaccaaatgttataattctgacaacatcc
aacataactgctgctattgatattgcgtttgttgatcgagctgatatcaaagcatatgtt
ggtcccccaactttgcaagcgcgttatgaaatcctaagatcctgcttgcatgagcttata
cgaacaggaattttatcacatctagaggattgtgatagcatgcttcctaactttgctagc
ttgagagagaaattgaatatgcctgaggtacaagatgcccagacaccactacacctgtgt
aaacaattgttcgaaactgcagaagcatgcgagggattgagtgggcgatctttaagaaag
cttccgttcctagcacatgcggctcttgcaaatccttactgttgcgaccctagcaagttc
ttgagtacaatgacagatacggctaggagggagcgttctgagctacctgactga
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