Malus sylvestris (European crab apple): 126607019
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Entry
126607019 CDS
T09027
Name
(RefSeq) adagio protein 3
KO
K12116
flavin-binding kelch repeat F-box protein 1
Organism
msyl
Malus sylvestris (European crab apple)
Pathway
msyl04712
Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:
msyl00001
]
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
126607019
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
msyl04121
]
126607019
Ubiquitin system [BR:
msyl04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
126607019
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Gene cluster
GFIT
Motif
Pfam:
Kelch_KLHDC2_KLHL20_DRC7
Kelch_4
Kelch_3
Beta-prop_ATRN-LZTR1
Kelch_2
Kelch_5
Kelch_1
Kelch_6
PAS_9
PAS_3
NANM
F-box-like
PAS
F-box
PAS_4
PAS_8
Motif
Other DBs
NCBI-GeneID:
126607019
NCBI-ProteinID:
XP_050130390
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Position
16:1259339..1262230
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AA seq
633 aa
AA seq
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MAMANKYEEEEEEEVQSFGKRLKWSRYEEPLEGEEEEEEEEEEDESQLALKPWTTAFPMR
PASFVVSDALEPDSPIIYVNKVFETFTGYCAHEVLGRNCRFLQYRDPHAQRRHPLVDPVV
VSEIRRCLEEGVEFHGELLNFSKDGTPLVNRLRLKPIHDDNGTVTHIIGIQVFSEAKIDL
NSVSYPVYKQTCNQQSDQSGKYPLISGQTPFTQYHDICGILQLSDEVLAHNILSRLTPRD
VASIGSVCRRIRQLTKNEHVRKMVCQNAWGREVTGTLELMTNKLGWGRLARELTTLEAVS
WRKFTVGGAVEPSRCNFGACAVGNRLVLFGGEGVDMQPMNDTFVLNLDAANPEWCRVSVK
SSPPGRWGHTLSWLNGSWLVVFGGCGREGLLNDVFVLDLDAKQPTWKEVFGGTPPPPRSW
HSSCTLEGSKLVVSGGCTDAGVLLSDTYLLDLATDNPRWREIPTSWAPPSRLGHSLSVYG
RSKILMFGGLANSGHLRLRSGETYTIDLEDENPQWRQLECNAFTSMGSQSAVVPPPRLDH
VAVSMPCGRIIIFGGSIAGLHSPSQLFLLDPSEEKPSWRILNVPGQPPKFAWGHSTCVVG
GTRVLVLGGHTGEEWILNDLYELRLASKQDSDH
NT seq
1902 nt
NT seq
+upstream
nt +downstream
nt
atggctatggcgaacaaatacgaagaagaggaggaggaggaggtgcagagctttggaaag
cggctgaaatggagcagatacgaggagcctctggagggggaggaggaagaagaggaggag
gaggaggaggatgagagccagctcgctctgaagccgtggacgacggcgttcccaatgagg
ccggcgtcgtttgtggtgtcggatgctctggagcccgacagtcctatcatttacgtcaac
aaagtctttgagaccttcaccggctattgtgcccacgaggtcctcggccgaaactgtcga
ttcctgcaatatagggaccctcatgctcaaaggcggcatcctcttgtagatccagttgtg
gtttcggagattcgaaggtgtctcgaggaaggagttgagtttcacggagagcttcttaat
ttcagtaaggatggaactcccttggtgaatagactaagactgaaacctatacacgatgat
aacggaaccgtcactcacatcataggcattcaagtattttctgaagcaaaaatagatctc
aacagtgtatcatatccagtttacaaacagacatgcaatcaacagtctgatcaatctggt
aaatatcctctcatcagtggacaaacacctttcacccagtatcacgatatatgcgggatt
cttcagctctctgatgaagttttggctcacaacattttgtcacgcttgactccgagggat
gtggcatccattgggtctgtgtgcagaagaatccgccaactgacaaaaaatgagcatgtg
aggaagatggtatgccaaaatgcatggggaagagaagtcaccggtacattggaactcatg
actaataagttagggtgggggcgtctggctagggaactgacaacccttgaggccgtttct
tggaggaaatttacggttggaggtgccgtggagccttcaagatgcaattttggtgcttgt
gctgtaggaaaccgacttgtgctatttggaggtgaaggagttgatatgcagccaatgaac
gacacatttgttctcaatcttgatgctgccaatcctgagtggtgtcgagtaagtgtgaaa
tcgtcgccaccagggcgttggggccacaccctttcatggttgaatggttcttggttggtt
gtatttggaggctgtgggcgggaaggattgctcaatgatgtgttcgttcttgacttggat
gccaagcagccaacgtggaaagaagtttttggtggaactccccctcctcctagatcctgg
cacagctcttgcacattagaaggatcgaaattggttgtgtcgggtggatgcacggatgct
ggggtccttcttagtgacacgtacttactggatctggcaacagacaacccaagatggaga
gagattccaacttcatgggctcctccttctaggttggggcattccctctctgtttatggt
cggtcaaagattctcatgtttggtggactggccaacagtgggcacttgcggttacgatca
ggggagacttacaccatcgatttggaagatgaaaacccccagtggaggcaactggagtgt
aatgcgttcaccagcatgggcagccagagtgcagtggttccccctcccagacttgaccat
gttgcagtcagcatgccttgcggaaggattataatatttggtggttcaatcgcggggctg
cattctccttctcagcttttcctcttggatccttcggaagagaaaccatcatggaggatt
ctcaacgttccggggcaaccacctaaatttgcttggggccatagcacttgcgtggtcgga
ggaacgagggtcctggtattgggtgggcacacaggtgaagagtggatacttaatgacttg
tatgagttgcgcttagcaagcaagcaggattcagaccactga
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