KEGG   Malus sylvestris (European crab apple): 126624332
Entry
126624332         CDS       T09027                                 
Name
(RefSeq) splicing factor SF3a60 homolog
  KO
K12827  splicing factor 3A subunit 3
Organism
msyl  Malus sylvestris (European crab apple)
Pathway
msyl03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:msyl00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    126624332
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:msyl03041]
    126624332
Spliceosome [BR:msyl03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    126624332
 Complex B
    126624332
 Complex C
   U2 SnRNP specific factors
    126624332
SSDB
Motif
Pfam: SF3a60_Prp9_C SDE2_2C SF3A3 SF3a60_bindingd MacP_activator Desulfoferrod_N
Other DBs
NCBI-GeneID: 126624332
NCBI-ProteinID: XP_050149360
LinkDB
Position
1:28754928..28759490
AA seq 509 aa
MSSTLLEQTRAAHEEVERLERLIVKDFMNEPPSSKDRLYQGHRVRQLIDTITSTTEKLIE
IYEDKDNARKDEIAALGGQTATGTNVFSAFYDRLKEIREYHRKHPVARVVDANEEEEALL
KEEPQIEFSGEEAFGRYLDLHELYNQYINSKFGEPIEYSAYLDTISQPQKIPRKLKSSRQ
YREYMENLLAYLIYFFQRTEPLQDLDRIFLKVETEFEEQWADGKVKGWENEKQENGHVQD
QLTMIDLDYYSTVEELMEVGPEKLKEALASLGLKTGGTVQQRAERLFLTKDTPLEKLDKK
HFAKGSRGAEQNGAAAAPQQVDNLKEIALLEAKTKKLCDLLSEAIERTRDNIMKKQALTY
EEIEAEREEEETQADTESDDDEQQIYNPLKLPMGWDGKPIPYWLYKLHGLGQEFKCEICG
NYSYWGRRAFERHFKEWRHQHGMRCLGIPNTKNFNEITSIEEAKELWKRIQARQGVNKWR
PDLEEEYEDREGNIYNKKTYTDLQRQGLI
NT seq 1530 nt   +upstreamnt  +downstreamnt
atgtcgtcgacgctgctggagcagacgcgtgcagctcacgaggaggtggagcggctggag
cggctgatagtgaaggacttcatgaacgagccgccgtccagcaaggaccgcttgtaccag
ggccaccgcgtccgccagctgatcgacaccatcacctccaccaccgaaaaacttattgag
atctatgaagataaagataatgcgaggaaggacgagattgcggctctcggaggccagact
gccactggcaccaacgttttcagcgcattttatgatagattgaaggagattcgtgagtat
caccgaaagcatccagttgctcgtgttgttgatgctaatgaggaagaagaagcactgctt
aaggaggagcctcaaatcgagttcagtggagaggaagcttttggacgataccttgacttg
catgaactatacaaccagtatattaattccaaatttggagaacctattgagtactctgct
taccttgatactatttcacaaccacaaaagattcctcgcaagctgaagtcgtcaaggcag
tacagggaatatatggaaaatctactcgcatatctgatatattttttccagaggacagag
cctttgcaagatcttgacaggatatttttgaaggttgaaactgaatttgaagagcaatgg
gcagatggtaaggtaaaaggatgggaaaatgagaagcaagaaaatgggcatgttcaagat
cagcttactatgattgatcttgattattatagcacggtggaagaacttatggaagtgggt
ccggaaaagctaaaggaggcactagcatcattaggactgaagacgggtggtactgttcag
cagcgtgcagagaggcttttccttacaaaggacacacctctggagaagttggacaagaaa
cattttgccaaaggttcgcgtggtgctgaacaaaatggggctgctgcagctccacaacaa
gttgacaatttaaaagaaattgctttattggaggctaaaacgaaaaaattatgcgactta
ctgagtgaggctattgaaagaacaagagacaacatcatgaagaaacaggctttgacatat
gaagaaattgaagcagaacgtgaagaggaagagacgcaggccgatactgaaagtgatgat
gatgaacaacagatttacaatccactgaaattgccaatgggttgggatgggaagcccatt
ccgtactggctgtataagcttcatggtcttggtcaggaattcaagtgtgagatttgcggg
aattacagttactggggacgtagagctttcgagagacattttaaggaatggcgccatcag
catggtatgcgttgccttggcataccgaacaccaagaacttcaatgagatcacatcaatt
gaggaagctaaagaactctggaagaggatacaagcacgacaaggcgtgaacaagtggcgc
ccggatcttgaagaagagtacgaagacagagagggtaacatatacaataagaagacatac
accgatctgcagcgacagggactgatttaa

DBGET integrated database retrieval system