KEGG   Malus sylvestris (European crab apple): 126625049
Entry
126625049         CDS       T09027                                 
Name
(RefSeq) splicing factor 3B subunit 6-like protein
  KO
K12833  pre-mRNA branch site protein p14
Organism
msyl  Malus sylvestris (European crab apple)
Pathway
msyl03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:msyl00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    126625049
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:msyl03041]
    126625049
Spliceosome [BR:msyl03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    126625049
 Complex B
    126625049
 Complex C
   U2 SnRNP specific factors
    126625049
SSDB
Motif
Pfam: RRM_1 RRM_5 RRM_10 RRM_7
Other DBs
NCBI-GeneID: 126625049
NCBI-ProteinID: XP_050150081
LinkDB
Position
6:complement(29098936..29100105)
AA seq 124 aa
MSNMNLIKVNTSLPPEVNHVLYVRNLPFNISSEEMYDIFGKYGTIPQIRIETNKDTRGTA
FVVYEDIYDAKTAVDHLSGFNFVNRYLIVLYYQQANMGKKSDMKKNEEEIARMQEKYGVS
TKDK
NT seq 375 nt   +upstreamnt  +downstreamnt
atgagtaacatgaatctcattaaagtcaacaccagcctccctccggaagtcaaccacgtg
ctctacgtccgcaacctccccttcaacatttcgagcgaggagatgtacgacatcttcggc
aagtacggcacaataccgcagattcgcatcgagacgaacaaggacaccagaggcaccgca
ttcgtcgtttacgaggacatctacgatgccaaaacggcggtggatcacctttccggcttc
aacttcgtgaaccggtacctcatcgtgctctactaccagcaggcgaatatgggcaagaag
tccgacatgaagaagaatgaggaagagatcgccaggatgcaggagaagtacggcgtctcc
accaaagataagtga

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