Malus sylvestris (European crab apple): 126626679
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Entry
126626679 CDS
T09027
Name
(RefSeq) uncharacterized protein LOC126626679
KO
K12869
crooked neck
Organism
msyl
Malus sylvestris (European crab apple)
Pathway
msyl03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
msyl00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
126626679
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
msyl03041
]
126626679
03036 Chromosome and associated proteins [BR:
msyl03036
]
126626679
Spliceosome [BR:
msyl03041
]
Complex B
Other components
Prp19-related factors
126626679
Complex C
126626679
Chromosome and associated proteins [BR:
msyl03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Other centrosome duplication proteins
126626679
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HAT_PRP39_C
HAT_Syf1_CNRKL1_N
HAT_PRP39_N
HAT_Syf1_CNRKL1_C
TPR_14
HAT
Suf
TPR_19
TPR_16
TPR_2
TPR_CcmH_CycH
HAT_Syf1_M
TPR_8
TPR_17
Mad3_BUB1_I
RAB3GAP2_C
ARM_TT21
NblA
U3_assoc_6
Motif
Other DBs
NCBI-GeneID:
126626679
NCBI-ProteinID:
XP_050152008
LinkDB
All DBs
Position
6:22969508..22973961
Genome browser
AA seq
705 aa
AA seq
DB search
MGSYKDADPSLGFLTRKDTEVKLPRPTRVKNKTPAPVQITAEQILREARERQEAEIRPPK
QKITDPTELADYRLRKRKEFEDLIRRVRWNVSVWIKYAQWEESQKDFKRARSVWERALEV
DYRNHTLWLKYAEVEMKNKFINHARNVWDRAVTLLPRVDQLWYKYIHMEEIIGNVAGARQ
IYERWMNWMPDQQGWLSFIKFELRYNEVERARAIFERFVQCHPKVGAWIRFAKFEMKNGE
VARARNVYERAVEILADDEEAEQLFVAFAEFEERCKETDRARCIYKFALDHIPKGRADDL
YKKFVGFEKQYGDRQGIEDAIVGKRRFQYEDEVRKNPRNYDAWFDYIRLEESAGNKDRIR
EVYERAIANVPPAPEKRYWQRYIYLWINYALYEELDAEDMERTRDVYRECLNLIPHQKFS
FAKIWLLAAQFEIRQLNLKGARQILGNAIGKAPKDKIFKKYIEIELNLGNMDRCRKLYEK
YLEWSPENCYAWTKYAELEQSLCETERTRSLFELAIAQPSLDMPELLWKAYIDFEISEGE
FERTRELYERLLDRTKHLKVWISYAKFEASAMVQDVVDSDMSEDQAPDYLLEQKKQCLLR
ARRVFEKAVNYFRTSAPELKEERGMLLEEWLNMEASFGDLGDVSLVQSKLPKKLKKRRPI
MTEDGPAGYEEYIDYMFPEEAQTTNLKILEAAYKWKRQKVSSDED
NT seq
2118 nt
NT seq
+upstream
nt +downstream
nt
atgggctcctacaaggacgcagacccttccctagggttcctaacccgaaaggacactgag
gtcaaactcccacgacccactagggttaagaacaaaaccccagcccccgtccaaatcact
gcagagcaaattcttcgggaggcacgtgagcgtcaggaggctgaaattcgacctcccaaa
cagaagataactgatcccactgagcttgctgattaccgtctccgtaagcgcaaagaattc
gaggacctaatccggcgtgtgaggtggaatgtcagtgtctggatcaagtatgcacagtgg
gaggagtcccagaaggacttcaagcgtgctcgctcggtttgggagcgtgcccttgaggtt
gattatcgaaaccacaccctgtggctcaagtatgcggaggtggagatgaagaacaagttc
attaaccatgcgagaaatgtgtgggaccgtgctgttacgctcttacccagagttgaccag
ctctggtacaagtacattcacatggaagagattatagggaatgtggctggtgctcgacag
atatatgagaggtggatgaattggatgccggaccagcaaggctggctctcctttatcaag
tttgagcttcgctataatgaagtggagcgtgctagagcgatttttgagcggttcgtacaa
tgtcatccaaaagttggtgcttggattcggtttgccaagtttgagatgaagaatggtgag
gtcgcgagggcaagaaatgtatatgagagagcagtggagattctagccgatgatgaggag
gctgagcagttatttgtggctttcgctgaattcgaagagcggtgcaaagaaactgatcga
gcaaggtgtatttataagtttgcacttgatcatatacccaaaggaagggccgatgactta
tataagaagtttgtgggtttcgagaagcagtatggagataggcaagggattgaagatgca
attgtgggaaagaggaggttccagtatgaagatgaggttaggaagaaccctcgtaattat
gatgcatggtttgattatataaggctagaagagagtgcagggaataaggatagaattaga
gaagtttacgagcgagcaattgctaatgttcctccggctccggagaagcgatattggcaa
cgatacatttatttatggattaactatgcactctacgaggagcttgatgctgaagacatg
gaacgtactcgagatgtgtacagggagtgccttaatctgattcctcaccagaagttttcg
tttgcaaaaatatggcttctcgctgcccagtttgagatacggcagctgaatctcaagggt
gcacgacagatccttggcaatgcaataggaaaggcacccaaagataagatatttaagaag
tatattgagattgagctgaaccttgggaatatggatagatgtcggaagttgtacgaaaag
tatctggagtggtccccagaaaattgttatgcgtggaccaagtatgcagagttagagcaa
tctttatgcgagacagaacgaaccaggtcgctttttgaacttgccattgcccagccatca
cttgacatgcctgagttgttgtggaaggcatacattgactttgaaatatcggaaggtgaa
tttgagagaactagagaactttacgagagactcctagaccggacaaaacacctcaaggtg
tggatcagttatgcgaaatttgaggcatctgctatggtgcaagatgttgtggattcagat
atgtccgaagatcaagccccggattatctccttgaacaaaagaaacaatgtcttctgcgt
gctcgaagggtttttgagaaagctgttaactattttagaacttcggcacccgagttgaag
gaagaaagaggtatgttgctggaagaatggttgaatatggaggctagctttggagacttg
ggtgatgttagcttagtccaatctaagcttccaaagaaactgaagaagaggaggccaata
atgactgaagacggccctgctgggtatgaggagtacattgattacatgttcccagaggaa
gctcagacgacaaatctcaagatattggaagcggcctacaagtggaaaaggcaaaaggtg
tcttccgatgaggactag
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