Malus sylvestris (European crab apple): 126627807
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Entry
126627807 CDS
T09027
Name
(RefSeq) transcription factor SPEECHLESS-like
KO
K20558
transcription factor SPEECHLESS
Organism
msyl
Malus sylvestris (European crab apple)
Pathway
msyl04016
MAPK signaling pathway - plant
Brite
KEGG Orthology (KO) [BR:
msyl00001
]
09130 Environmental Information Processing
09132 Signal transduction
04016 MAPK signaling pathway - plant
126627807
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
msyl03000
]
126627807
Transcription factors [BR:
msyl03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
HLH domain only
126627807
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Motif
Pfam:
HLH
bHLH-TF_ACT-like_plant
Motif
Other DBs
NCBI-GeneID:
126627807
NCBI-ProteinID:
XP_050153315
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Position
7:33865790..33868822
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AA seq
398 aa
AA seq
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MAMEDHDRSSDFLEEHEQYCYSDTNCNLGTPGDDLFSILQSLDDHGFGGGGGGVVDFPSP
LASAPFDDDQLLAVFSSSPKDLSSSADKTEFDETNSPPKTKRLKLSSAATPTATATTTTT
NSSDQDGGRMSHITVERNRRKQMNDHLTVLRSLMPCFYVKRGDQASIIGGVVDYINELQQ
VLQSLEAKKQRKAYSCEVLSSPRLQQVSSPRPPGPSPPVLSPRKPPLSPRLGGSSLPPIS
PRTPQPTSPYKSTAARTILQQPQILPAAANIISNYLISNPTMAASSSLEPSPTSSSATSS
INNSVDNLNELFANSKSAIADVEVKFSGPNVLLKTVSPPIPGQALKIISALEDLSLEILH
VSVTTVDETMLNSFTIKIGIECQLSAEELAHQIQQTFC
NT seq
1197 nt
NT seq
+upstream
nt +downstream
nt
atggccatggaagatcacgaccgttcatctgattttctcgaagaacatgagcagtactgc
tacagcgataccaattgtaacttgggaactccgggggatgatctttttagcatattacag
agcttagatgatcatgggtttggaggaggaggcggcggagtcgtagactttccttccccg
ttagcttcagcaccattcgatgatgaccaactacttgctgtttttagctcatcaccaaaa
gacctctcctcctcagctgataaaaccgagtttgatgaaactaactctccacccaaaacc
aagagactcaagctctcatcagctgccacccccaccgccactgccaccacaacaaccaca
aattcttcagatcaggatggagggcggatgtctcatataacggtggagcgcaaccgcaga
aagcaaatgaacgaccacttgactgtcttgcgctctcttatgccttgtttctatgttaaa
cgaggagatcaagcatcaatcattggaggggtggttgattacatcaatgagctgcagcaa
gttcttcaatcacttgaagccaaaaagcaacgaaaagcatacagctgtgaagtgttaagc
agccctaggttgcagcaggtttcaagtccaaggccacctggtccctcaccaccagttctc
agccctagaaagccacctctcagccctaggctcggcggcagcagcttaccacccatcagc
ccaagaactccacaacccaccagcccttataagtccacggcagccaggacaatattgcaa
caaccacaaatattacctgcagctgctaatattattagtaattatctgatttctaatcca
acaatggctgctagctcatcacttgagccatcccctacttcttcaagtgctacttcctct
attaataatagtgtcgacaatctgaacgagctttttgccaactccaagtccgccattgcg
gacgtggaggtgaaattttccggtccaaatgttcttttgaaaacagtgtctcctccgata
cccggacaggctctcaaaatcatttccgctcttgaagacctttcgcttgaaattctccat
gtcagtgtcaccaccgttgacgaaaccatgcttaattccttcaccatcaagattggaatt
gaatgccaacttagtgccgaggaactcgctcaccaaatccagcaaacattctgctaa
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