Malus sylvestris (European crab apple): 126629134
Help
Entry
126629134 CDS
T09027
Name
(RefSeq) probable pectate lyase 12 isoform X1
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
msyl
Malus sylvestris (European crab apple)
Pathway
msyl00040
Pentose and glucuronate interconversions
msyl01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
msyl00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
126629134
Enzymes [BR:
msyl01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
126629134
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
126629134
NCBI-ProteinID:
XP_050155005
LinkDB
All DBs
Position
7:24082752..24088160
Genome browser
AA seq
500 aa
AA seq
DB search
MLLPTTCILLICFSLSLLSKASSSSLNLTLPHQHPDPDAVVYEVQRRVNASVSRRQMLSI
DVKDQSKCLSGNPIDDCWRCEDWSNNRQRLADCGIGFGMDALGGKGGLIYIVTDSSDSNP
ANPTPGTLRHAVIQTEPLWIIFSADMTIKLKYELIVNSFKTIDGRGVNVHVTGGGCITLQ
YVSNIIIHNIHVHHCKPAGNTNIASSPTHVGWRGKSDGDGISLFGARKIWIDHCSLSFCA
DGLIDAIMGSTGITISNNYFAHHDEVMLLGHDDKYLPDSGMQVTIAFNHFGVALVQRMPR
CRRGYIHVVNNDFTRWEMYAIGGSGNPTINSQGNRYTAPQDQNAKEVTKRVDTNEGDWSD
WNWRTEGDIMVNGAFFVPSGAGMSTQYAKASSIEPKSVALIERITANAGVFGDPRESSRV
TSPDDGTITDGGSTTSGSGGSNGKGNDDDYFGMIFGNGAGPSSSSSSNTIFLSLLIIFIL
YVTTNHGGALLSLPLLLTLL
NT seq
1503 nt
NT seq
+upstream
nt +downstream
nt
atgcttcttcctaccacctgcattctcttaatttgtttctctctatcccttctctctaaa
gcttcttcttcctccttgaacctcaccctccctcaccagcacccagaccctgatgctgtt
gtttatgaagttcaaaggagagtcaatgcgtctgtttccaggcgccaaatgctgtccatt
gatgtcaaggaccaaagcaagtgcctcagcggtaacccaatcgacgactgctggcgctgc
gaggactggagcaacaaccgccaaaggctcgccgattgcggcattgggttcggcatggac
gccttggggggcaaagggggcctgatctacatagtcaccgactcctccgattccaacccg
gcgaacccaactccgggcacgctccgccacgccgtcatccaaaccgagcccctctggatc
atcttctccgccgacatgaccatcaagctcaaatacgagctcattgtcaacagcttcaag
accatcgacggccgcggcgtcaacgtccacgtcaccggcggtggatgcataaccctccag
tacgtctccaacatcatcatccacaacatccacgtgcaccactgcaagcccgccggcaac
accaacatcgcctccagccccacccacgttggctggcgcggcaaatcggacggcgacggc
atctccctcttcggcgctcgcaaaatctggatcgaccactgctccctctcgttctgcgcc
gacggactgatcgacgccatcatggggtccaccggaatcacgatttccaacaactacttc
gcccaccacgacgaggtgatgctattgggccacgacgacaagtacctgccggacagcggg
atgcaggtgacgattgcgtttaaccacttcggtgtggcgctggtgcagcgtatgccgcgg
tgcagacgcgggtacatccacgtggtgaacaacgacttcacgcggtgggagatgtatgct
atcggcggtagcggtaaccccaccatcaacagccaggggaaccgctacactgctcctcag
gaccagaacgccaaggaggtgacaaagcgcgtggacacgaacgagggggactggtctgac
tggaattggaggacggagggggacataatggtaaacggcgcgtttttcgtgccgtccggc
gcgggaatgagcactcagtacgccaaggcctcaagcatcgagcccaagtccgttgctctc
atcgaacgaatcacagccaacgccggtgttttcggtgatccaagggagagcagtcgcgta
acaagccccgatgatgggaccatcaccgacggcggcagcaccaccagtggcagtggagga
tcgaacggcaagggcaatgacgatgactatttcggaatgatatttgggaacggtgctgga
ccaagctcttcatcatcttcaaacacaatattcttgtctctcttaattatttttattttg
tacgttaccaccaatcatggtggcgctctattatcactacccttattattaacattatta
taa
DBGET
integrated database retrieval system
