KEGG   Malus sylvestris (European crab apple): 126629991
Entry
126629991         CDS       T09027                                 
Name
(RefSeq) splicing factor SF3a60 homolog
  KO
K12827  splicing factor 3A subunit 3
Organism
msyl  Malus sylvestris (European crab apple)
Pathway
msyl03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:msyl00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    126629991
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:msyl03041]
    126629991
Spliceosome [BR:msyl03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    126629991
 Complex B
    126629991
 Complex C
   U2 SnRNP specific factors
    126629991
SSDB
Motif
Pfam: SF3a60_Prp9_C SDE2_2C SF3A3 SF3a60_bindingd MacP_activator Desulfoferrod_N
Other DBs
NCBI-GeneID: 126629991
NCBI-ProteinID: XP_050156122
LinkDB
Position
7:complement(34141651..34146637)
AA seq 509 aa
MSSTLLEQTRAAHEEVERLERLIVKDFMNEPPSSKDRLYQGHRVRQMIDTITSTTEKLIE
IYEDKDNARKDEIAALGGQTATGTNVFSAFYDRLKEIREYHRKHPVARVVDANEEEEALL
KEEPQIEFSGEEAFGRYLDLHELYNQYINSKFGEPIEYSAYLDAFSQPQKIPHKLKSSRQ
YKEYMENLLAYLIYFFQRTEPLQDLDRIFLKVETEFEEQWADGKVKGWENEKQENGHVQD
QLTMIDLDYYSTVEELMEVGPEKLKEALASLGLKTGGTVQQRAERLFLTKDTPLEKLDKK
HFAKGSRGAEQNGAAAAPQQVDNLKEIALLEAKTKKLCDLLTEAIERTKDNIMKKQALTY
EEIEAEREEEETQADTESDDDEQQIYNPLKLPMGWDGKPIPYWLYKLHGLGQEFKCEICG
NYSYWGRRAFERHFKEWRHQHGMRCLGIPNTKNFNEITSIEEAKELWKRIQARQGVNKWR
PDLEEEYEDREGNIYNKKTYTDLQRQGLI
NT seq 1530 nt   +upstreamnt  +downstreamnt
atgtcgtcaacgctactggagcagacacgtgccgctcacgaggaggtggagcggctggag
cggctgatagtgaaggacttcatgaacgagccgccgtccagcaaggaccgcttgtaccag
ggccaccgcgtccgccaaatgatcgacaccatcacctccaccaccgaaaaactgattgag
atctatgaagataaagataatgcgaggaaggacgagattgcggccctcggaggccagact
gccactggcaccaacgttttcagcgcattttatgatcgattgaaagagattcgtgagtat
caccgaaagcacccagttgctcgtgttgttgatgctaatgaggaagaagaagcactgcta
aaggaggaacctcaaatcgagttcagtggagaggaagcttttggaagataccttgacttg
catgaactatacaaccagtatattaattccaaatttggagaacctattgagtactctgct
taccttgatgctttttcacaaccacaaaagattccacacaagctgaagtcgtcaaggcag
tacaaggaatatatggaaaatctacttgcatacctgatatattttttccagaggacagag
cccttgcaagatcttgacagaatatttttgaaggttgaaaccgaatttgaagagcaatgg
gcagatggcaaggtaaaaggatgggaaaatgagaagcaagaaaatgggcatgttcaagat
caacttactatgattgatcttgattattatagcacggtggaagaactgatggaagtgggc
cctgaaaagctaaaggaggcactagcttcattaggactgaagacgggtggtactgttcag
cagcgtgcagagaggcttttccttacaaaggacacacctctggagaagttggacaagaaa
cattttgccaaaggttcgcgtggtgcagaacagaatggggctgctgcagctccacaacaa
gttgacaatttaaaagaaattgctttattggaggccaaaacgaaaaaattatgcgactta
ctgactgaggctattgaaagaacaaaagacaacatcatgaagaaacaggctttgacatat
gaagaaattgaagcagaacgtgaagaggaagagacacaggccgatactgaaagtgatgat
gatgaacagcagatttacaatccactgaaattgccaatgggttgggatgggaagcccatt
ccctactggctgtataagcttcatggtcttggtcaggaattcaagtgcgagatatgcggg
aattacagttactgggggcgtagagcttttgagagacattttaaggaatggcgccatcag
cacggtatgcgttgcctaggtataccaaacacgaagaacttcaacgagatcacatcaata
gaggaagctaaagaactgtggaagaggatacaagcacggcaaggtgtaaacaaatggcgt
ccggatcttgaagaagagtatgaagacagagaaggtaacatatacaataagaagacatat
actgatctgcagcgacaggggctgatttaa

DBGET integrated database retrieval system