KEGG   Malassezia sympodialis: MSY001_2450
Entry
MSY001_2450       CDS       T06541                                 
Name
(RefSeq) uncharacterized protein
  KO
K12828  splicing factor 3B subunit 1
Organism
msym  Malassezia sympodialis
Pathway
msym03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:msym00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    MSY001_2450
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:msym03041]
    MSY001_2450
   03036 Chromosome and associated proteins [BR:msym03036]
    MSY001_2450
Spliceosome [BR:msym03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    MSY001_2450
 Complex B
    MSY001_2450
 Complex C
   U2 SnRNP specific factors
    MSY001_2450
Chromosome and associated proteins [BR:msym03036]
 Eukaryotic type
  Chromatin remodeling factors
   B-WICH complex
    MSY001_2450
SSDB
Motif
Pfam: PPP2R1A-like_HEAT TOR1L1_N SF3b1 HEAT_EZ HEAT_2 TPR_DNAAF5 HEAT_GCN1 HEAT_EF3_N HEAT_MROH2B_C XMAP215_CLASP_TOG TPR_IPO5 TPR_IMB1 Adaptin_N HEAT_Maestro Cnd1 Htt_N-HEAT_1 RRP12_HEAT Dopey_N IFRD DUF3730
Other DBs
NCBI-GeneID: 30057335
NCBI-ProteinID: XP_018740977
LinkDB
Position
Unknown
AA seq 1163 aa
MSNQELDDVQRLQATRQANKGDIGFGSTKGDEETYGARTSRSSYVDSLPTDRSYGDAGDD
DDDIGAAHRRANPLDAFSAPQHLLNEFADDSFDPLADRVAQRQIAARQSDYHNRRFQRDL
GPDRRDPFSADGAQEDEGYGEAMRRANLEREEQRVRRIIEDKEREAEQGGKDDADAKERD
VTPPATPRVERKRRWDVAPDDAPPAEETKKRSRWDEAPADEATKKRSRWDEVPAAEGSAP
RNPRVRFMSDAELDALLPSEGYIIVEPPPDYAPIRTGAHKLAEAPEGNEGFTMHESSTLG
SMADDIVADLPTDVPGVGQLAFMKPEDQKYFGKVLQEDDEEERLSRAEAKEREIMRLLLK
IKNGTPQLRKQALRQIADGARDFGPGPLFDKILPLLMERTLEDHERHLLVKVIDRVLYKL
DDLVRPYVHRILVVIEPLLIDEDYYVRIEGREIISNLAKAAGLAHMISTMRPDIDHADEY
VRNTTARALAVVASALGIPAILPFLRAVCRSKKSWQARHTAIRVVQQMAIMMGCAVLPHL
KGLIDCIGQGLEDEQQKVKTMTALALSALAEASAPYGIESFENVLKPLWVGIRHHRGKGL
AAFLKAIGFIIPLMDSDSTLYFVKEVTPTLIREFQSADDDMRRIVLRVVRQAAATDGVTG
TFLRSELVPDFFKHFWVRRMALDRRNFKEVVESTRALAEKVGVGEVVGRLVHFLKDDSEP
FRRMAMDTIQHVVGTLGTADVDERLEVQLVDGMMYAFQEQSVEDSVMLDGTGTIANALGM
RIKPYLMQIVSTILWRLNNKNASTRQQAADLTTKLAVVIKQCGEDSLLSNLGVVLFEQLG
EEFPEALASIIAAEGAIANVVGMTQMNPPVKDLLPRMTPILRNRHERVQEASINLIGRIA
DRGAEFVSAREWMRICFELLDLLKAHKKAVRRAAINSFGYIAKAIGPQDVLQVLLTNLRV
QERQSRVCSTVAIAIVAETCGPFTCLPAILNEYRTPELNVKHGCLKALSWVFEYIGEMSK
DYVYSVVTLLDDAFTDRDVVHRQTAASIVRHLALGTAGLGKEDAMQHLLNLVWPNIFETS
PHVINAVMDAVEALRVSLGPGVILYHTLQGLFHPARKVREAYVRTYNTNYVGAQDALVAY
YPSLVDHDDERNDYARHDLGMFV
NT seq 3492 nt   +upstreamnt  +downstreamnt
atgtcgaaccaggagctggacgacgtccagcgcctgcaggctacacgacaggccaacaag
ggcgacattggtttcgggagtacgaaaggcgacgaggagacctatggcgcgcgcacatcg
cgttcgtcgtacgtcgactcgctgccgaccgatcgcagctacggcgacgctggcgacgat
gacgacgacattggcgccgcgcaccgacgtgcaaaccctctggacgcgttttctgcaccc
cagcatctacttaatgaattcgctgacgactcgtttgatccactcgcggaccgcgtggcg
cagcgccagattgccgcgcggcagtcggactaccataaccggcgcttccagcgggatctg
ggcccagaccgacgcgatccattctcggcggatggtgcacaggaagatgaagggtacgga
gaagccatgcgccgcgccaatctagagcgtgaggagcagcgtgtgcgccgcattattgag
gacaaggagcgcgaggctgagcagggtggcaaagacgatgcagacgcgaaggagcgagac
gtgaccccgccagccacaccgcgcgtggagcgcaagcgccgctgggatgtggcaccggac
gatgcgccccctgctgaggaaacgaagaagcgttcgcgctgggacgaggcgccggcggac
gaggcgacgaagaagcgctcgcggtgggacgaggtacctgccgctgaggggagtgcgccg
cgcaatcctcgcgtgcgatttatgtcagatgcagagcttgatgcgcttcttccgagcgag
ggctatatcattgtcgagccgccgcctgactatgcgcccatccgcaccggcgcgcacaag
ttggccgaggcgcccgagggcaacgagggcttcaccatgcacgagtcgtcgacgctcggc
tcgatggccgacgatattgtggcggatctgcctaccgatgtgccgggcgttgggcagctt
gcatttatgaaacccgaggaccaaaagtactttggcaaggtgctccaagaagacgacgaa
gaggagcgcctatctcgtgctgaagccaaggagcgcgagatcatgcgcctgctgctcaag
atcaagaacggtacgccgcagctgcggaagcaggcgctgcggcagattgccgatggcgca
cgggactttgggcctgggccgctgtttgacaagatcttgccgctgcttatggagcgtacg
ctggaggaccatgagcggcacctactggtcaaggtcattgaccgggtcctgtacaagctg
gacgacctcgtgcggccgtacgtccaccgcatcttagtggtgattgagccactgctcatt
gacgaggactactatgtgcgtatcgagggccgcgagattatcagcaacctggccaaggca
gccggactcgcccatatgatcagcacgatgcgcccagacattgaccatgcggacgagtac
gtgcggaacacgacggcgcgtgccttggctgtggtggcatccgcgctgggtattcctgcg
attctgccgttcctccgcgcggtatgccgctcgaagaagagctggcaggcgcggcatacg
gcgattcgtgtggtacagcaaatggcgatcatgatgggctgcgctgtgctaccgcatctc
aaaggcttgattgactgcatcggtcagggtcttgaggatgagcagcagaaagtcaagacg
atgacagcgctggccctgtcggcgctggccgaggcctccgcgccgtacggtattgaaagc
tttgagaatgtgctcaagccgctgtgggtcggtattcggcatcaccggggcaaaggtctc
gctgcattcttgaaggcgatcggctttatcatccctctcatggactcggacagcacgctg
tactttgtcaaggaagtgacgccgacgctcatccgcgagtttcagagcgccgacgacgat
atgcggcgcattgtgctgcgcgtcgtgcgtcaggcggcggcgaccgacggtgtcacaggc
acgttcttgcgctcggagctggtgcccgactttttcaagcacttttgggtgcgtcgcatg
gcgctggaccgccgcaactttaaggaggtcgtggaatcgacgcgtgcactggccgagaaa
gtgggcgtcggcgaggttgtgggacgcctcgtgcactttttgaaggacgacagcgagccg
ttccgccgcatggccatggacacgatccagcacgtggttggcacgctgggcaccgcggac
gtggatgagcggctggaggtgcagctcgtggacggcatgatgtatgcattccaggagcag
tcggtggaggactcggtgatgctggacggcacaggcacgattgcgaatgcgctgggtatg
cggatcaagccgtacctgatgcagattgtatcgacgatcctctggcggttgaacaacaag
aatgcgagcacgcggcagcaagctgcggatctcacaaccaagctcgcggtcgtgatcaag
cagtgtggcgaggactcactgctgtcgaacctgggcgtggtgctctttgagcagctgggc
gaagagttccctgaggcgctcgcgtcgattattgctgcggagggcgcgattgccaacgtg
gtgggcatgacgcaaatgaacccgccggtgaaggatttgctgccgcgcatgacgccgatc
ctgcgcaaccgccacgagcgtgtccaagaagcgagcatcaacctaatcgggcgtatcgcg
gatcgcggcgccgagtttgtgagtgcgcgcgagtggatgcgtatctgtttcgagctgctg
gacctgctcaaggcgcacaagaaggcggtgcggcgcgcggcaatcaacagctttgggtac
attgccaaggcgattgggccacaggatgtgctgcaagttctgttgacgaacctgcgtgtg
caggagcgccagagccgagtgtgctctacggtcgcgatcgcgatcgtggccgagacgtgt
gggccgttcacctgcctgcctgcgattttgaatgagtatcgcacgcccgagctgaacgtg
aagcacgggtgcctcaaggcgctcagctgggtttttgaatacattggcgagatgagcaag
gactatgtgtacagtgtggtcacactgctcgacgatgcattcacggaccgcgacgttgtg
catcgccagaccgccgcgagcatcgtcaggcacctcgcactgggcacggccggcctcggc
aaggaggacgcgatgcagcacctgctgaacctcgtgtggcccaacatcttcgagacgtcg
ccgcacgtgatcaatgctgtgatggacgccgtggaagcgctgcgcgtgtcgctcgggccc
ggcgtgattctgtaccatacactgcagggcctcttccaccctgcccgcaaggtgcgcgag
gcgtacgtgcgcacgtacaacaccaactatgtgggtgcgcaagacgctctcgtcgcttac
tacccgtcgctcgtggaccacgacgacgagcgcaacgactatgcgcggcacgatctaggc
atgtttgtgtag

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