Malassezia sympodialis: MSY001_3309
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Entry
MSY001_3309 CDS
T06541
Name
(RefSeq) uncharacterized protein
KO
K12623
U6 snRNA-associated Sm-like protein LSm4
Organism
msym
Malassezia sympodialis
Pathway
msym03018
RNA degradation
msym03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
msym00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
MSY001_3309
09123 Folding, sorting and degradation
03018 RNA degradation
MSY001_3309
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
msym03019
]
MSY001_3309
03041 Spliceosome [BR:
msym03041
]
MSY001_3309
Messenger RNA biogenesis [BR:
msym03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
MSY001_3309
mRNA degradation factors
5'-3' decay
Lsm complex
MSY001_3309
Spliceosome [BR:
msym03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
MSY001_3309
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
Ntox34
Motif
Other DBs
NCBI-GeneID:
30058194
NCBI-ProteinID:
XP_018741789
LinkDB
All DBs
Position
Unknown
AA seq
119 aa
AA seq
DB search
MVRCGRVLTECLVPDSQLVELKNSETFNGHLVACDNYMNITLRDVYQTSASGEQFWKMPE
VYIKGSTIKYCRVVDTLIDTVREAEEQARKQRQQAASHGHRGRHDGHRGRGHRGPRTRT
NT seq
360 nt
NT seq
+upstream
nt +downstream
nt
atggtgcgttgcgggcgagtgctgaccgagtgtctcgtgcctgacagtcagctcgtggag
ctgaaaaacagcgaaacgttcaacgggcatctggttgcctgcgacaactacatgaacatc
acgctgcgcgacgtataccagacgagtgcgagtggcgagcagttttggaagatgccggag
gtgtacatcaagggcagcacgatcaagtactgccgcgtggtcgatacgctgatcgacacg
gtgcgcgaggccgaggagcaggcgcgcaagcagcggcagcaggccgccagccacggccac
cgcgggcgccacgacggccaccgcggccgcggccaccgcggtccccgcacgcggacctag
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