Mesoplasma syrphidae: CXP39_02715
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Entry
CXP39_02715 CDS
T05255
Name
(GenBank) excinuclease ABC subunit C
KO
K03703
excinuclease ABC subunit C
Organism
msyr
Mesoplasma syrphidae
Pathway
msyr03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
msyr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
CXP39_02715
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
msyr03400
]
CXP39_02715
DNA repair and recombination proteins [BR:
msyr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CXP39_02715
BRITE hierarchy
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Ortholog
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GFIT
Motif
Pfam:
UvrC_RNaseH_dom
GIY-YIG
UVR
HHH_5
HHH_2
DUF1451
Motif
Other DBs
NCBI-ProteinID:
AUF83697
UniProt:
A0A2K9C5X9
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Position
complement(628347..630113)
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AA seq
588 aa
AA seq
DB search
MNLEAKIKNLPDKPGCYIYYNKENQVIYVGKAKRLKRRVASYFNRAHNIKTTRLVREITN
LDYFVVNNEKEALVLEENLIKKYRPRFNVLLNDDKSYPYIIITNESDPQYKYIRKYDKKA
LRSYGPLPQGSNAREILITLKRLFPLRRCKGNLNKPCLYYHINQCSGACFKVVDYSYYQH
QIRKVDKFFKGDVKEVENSLKQKMQAAADNLQFEEAQRIKEQLNSLNFITTKQTVELRDD
KNRDVITYLIDDDKIVFVTLFYRLGKLLFKDEHIQDYYEQDTSELLSNYINQIYDRNMLP
NQIIIPQEMDFENLRENIKSISTHPLANIEKTLLELAENNAKETMIKTKLNSQSFANNEV
LLLEELQSILGLEKYPYHIEMFDISNIGNEFVTGSCVVYKDGKPSRNDFRKYNIEIEQPS
DYERLKNMIYRRYQKALVEKRDFPDLIIMDGGIIQVHAAKEQIELLNLKIPVIGLVKDNY
HKTEYLLDTDENKIVIKSNVKLYNFLASIQLRVDEYAKSGFRKKQNTSFLRSEFESIPGM
GKKRLQELFKGFNTISDMKAATSEELNKVLKNKKLTSQLMDYLQNREL
NT seq
1767 nt
NT seq
+upstream
nt +downstream
nt
atgaatttagaagcaaaaattaaaaatctccctgacaaaccaggctgctatatatactac
aacaaggaaaatcaagttatttatgttggtaaagcaaagcgattaaaacgcagagttgct
tcatattttaatcgagcacataatataaaaacgactcgactagttcgagaaattactaac
cttgattactttgtagttaataatgaaaaagaggctttggttttagaagaaaatttaatt
aaaaaatatcgaccacgatttaatgttttattaaacgatgataaaagttatccatatatt
attattactaatgaatctgatccacaatataagtatattcgtaagtatgataaaaaagca
ttgcgaagctacggaccattacctcaaggttcaaacgctcgagaaattttgattacacta
aaacgcttgtttccattacgtcgctgtaaaggaaacctaaataaaccgtgtttatattat
catataaatcagtgttcaggagcttgtttcaaagttgttgattatagttattatcagcac
caaattagaaaagtagataaattttttaaaggtgatgtgaaagaagttgaaaatagtcta
aagcaaaagatgcaagctgctgctgacaatttgcaatttgaagaagctcaaagaattaaa
gaacaacttaatagtttgaattttattacaactaaacaaactgttgaactaagagatgat
aaaaatcgtgatgtgattacttacttaattgatgatgataaaattgtttttgttacatta
ttctatcgtcttggaaaactactgtttaaagatgaacacattcaagactattatgaacaa
gatacaagtgaattattatcaaactatattaatcaaatttatgatcgaaatatgctgcct
aaccaaattatcattccacaggaaatggattttgaaaatctaagagaaaatattaaaagc
attagtactcatcctttagcaaatattgaaaagacattattggaattggctgaaaataat
gctaaagagacaatgattaaaacaaaacttaattcgcaatcatttgcaaataatgaagtg
ctgcttcttgaagaacttcaaagtattttaggacttgaaaaatatccttatcatattgaa
atgtttgacatatcaaacattggaaatgaatttgtaactggaagttgtgttgtttacaaa
gatggcaagccttcacgcaatgattttagaaagtataatattgaaatcgaacaaccttca
gactatgagcgtttaaaaaatatgatttaccgtcgttatcaaaaagcactagttgaaaaa
cgagattttcctgacttaattattatggatggtggaataattcaagttcatgccgccaaa
gaacagatagaactactaaacttgaaaattccagtaattggcttagttaaagataactat
cataaaactgaatatttgcttgatactgatgaaaataaaatagttattaaatcaaatgta
aagttatataattttttggcatcaattcaacttcgagttgatgaatatgccaaatcagga
tttagaaaaaaacaaaatacatcttttttaagaagtgagtttgaatctattccaggaatg
ggtaaaaaacgccttcaggagctattcaaaggctttaacacgatttcagatatgaaagct
gcaacatctgaagaattgaataaagttctcaaaaataaaaagctaactagccagcttatg
gattatctacaaaatagggaattatag
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