Metallosphaera tengchongensis: GWK48_05535
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Entry
GWK48_05535 CDS
T06642
Name
(GenBank) RNA-binding protein
KO
K03679
exosome complex component RRP4
Organism
mten
Metallosphaera tengchongensis
Pathway
mten03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mten00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
GWK48_05535
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mten03019
]
GWK48_05535
Messenger RNA biogenesis [BR:
mten03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
GWK48_05535
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
GWK48_05535
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Ortholog
Paralog
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GFIT
Motif
Pfam:
KH_6
RRP4_S1
KH_1
RRP40_S1
S1
Motif
Other DBs
NCBI-ProteinID:
QKQ99907
UniProt:
A0A6N0NX17
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All DBs
Position
1018295..1019026
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AA seq
243 aa
AA seq
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MSGNTKIYLQDKTVVVPGDLIAEGSFQIPWSPYIIKQDNKYYASVIGILDVKDSFFEVIP
LEGSYYYPRIGDTVIALVEDIELYGWRTDIKAPYSAYLPASSLLGRPANVGEDLRRYIDI
GDYVIAKVDSFDRTSDPQISVKGKGLGRVTSGTVVDILPVKVPRVIGKGKSMLETLTTET
GCDVLVGQNGRVWANCPSKEKEEVLLIAIRTIEKESHTKGLTDRIKKLIKESLGDKSVTS
SEA
NT seq
732 nt
NT seq
+upstream
nt +downstream
nt
atgtcgggaaacaccaagatatatcttcaggataagacagtagtagttccaggagatcta
atagcagagggatctttccagattccttggtctccttacattataaaacaagataacaaa
tattatgcatctgtaatagggatcttagacgttaaggattcgttctttgaagtaatacct
ctagaaggttcatactactatccacggataggagacacggtaattgccttagttgaggat
atagagttatatggatggcgaactgacatcaaggcaccgtattcagcttatcttccagcg
tcgtctctcctgggaagaccagcaaacgtcggagaggatttaagaagatatattgatata
ggcgactacgtgatagccaaggtagacagttttgataggacgtctgatccgcagatatct
gttaagggaaagggactaggtagagttacctcaggaacagtagtggatatactacctgta
aaggttccaagggtaattgggaagggtaaaagtatgctggagacgctaacaactgagacc
ggctgtgatgttttggttggacaaaatggaagggtttgggctaactgtccttcaaaggag
aaggaggaggtacttcttatagccattaggacgatagaaaaagagtcccatactaaagga
ctaactgatagaattaaaaaactgataaaagaatcattaggtgataagagtgttacaagt
tcagaagcctaa
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