Macaca thibetana thibetana (Pere David's macaque): 126939642
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Entry
126939642 CDS
T08579
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB1 isoform X1
KO
K03006
DNA-directed RNA polymerase II subunit RPB1 [EC:
2.7.7.6
]
Organism
mthb
Macaca thibetana thibetana (Pere David's macaque)
Pathway
mthb03020
RNA polymerase
mthb03420
Nucleotide excision repair
mthb05016
Huntington disease
Brite
KEGG Orthology (KO) [BR:
mthb00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
126939642
09124 Replication and repair
03420 Nucleotide excision repair
126939642
09160 Human Diseases
09164 Neurodegenerative disease
05016 Huntington disease
126939642
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mthb03021
]
126939642
03400 DNA repair and recombination proteins [BR:
mthb03400
]
126939642
Enzymes [BR:
mthb01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
126939642
Transcription machinery [BR:
mthb03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
126939642
DNA repair and recombination proteins [BR:
mthb03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
126939642
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_6
RNA_pol_Rpb1_7
RNA_pol_Rpb1_3
RNA_pol_Rpb1_R
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-GeneID:
126939642
NCBI-ProteinID:
XP_050621131
LinkDB
All DBs
Position
16:complement(13858138..13891946)
Genome browser
AA seq
1970 aa
AA seq
DB search
MHGGGPPSGDSACPLRTIKRVQFGVLSPDELKRMSVTEGGIKYPETTEGGRPKLGGLMDP
RQGVIERTGRCQTCAGNMTECPGHFGHIELAKPVFHVGFLVKTMKVLRCVCFFCSKLLVD
SNNPKIKDILSKSKGQPKKRLTHVYDLCKGKNICEGGEEMDNKFGVEQPEGDEDLTKEKG
HGGCGRYQPRIRRSGLELYAEWKHVNEDSQEKKILLSPERVHEIFKRISDEECFVLGMEP
RYARPEWMIVTVLPVPPLSVRPAVVMQGSARNQDDLTHKLADIVKINNQLRRNEQNGAAA
HVIAEDVKLLQFHVATMVDNELPGLPRAMQKSGRPLKSLKQRLKGKEGRVRGNLMGKRVD
FSARTVITPDPNLSIDQVGVPRSIAANMTFAEIVTPFNIDRLQELVRRGNSQYPGAKYII
RDNGDRIDLRFHPKPSDLHLQTGYKVERHMCDGDIVIFNRQPTLHKMSMMGHRVRILPWS
TFRLNLSVTTPYNADFDGDEMNLHLPQSLETRAEIQELAMVPRMIVTPQSNRPVMGIVQD
TLTAVRKFTKRDVFLERGEVMNLLMFLSTWDGKVPQPAILKPRPLWTGKQIFSLIIPGHI
NCIRTHSTHPDDEDSGPYKHISPGDTKVVVENGELIMGILCKKSLGTSAGSLVHISYLEM
GHDITRLFYSNIQTVINNWLLIEGHTIGIGDSIADSKTYQDIQNTIKKAKQDVIEVIEKA
HNNELEPTPGNTLRQTFENQVNRILNDARDKTGSSAQKSLSEYNNFKSMVVSGAKGSKIN
ISQVIAVVGQQNVEGKRIPFGFKHRTLPHFIKDDYGPESRGFVENSYLAGLTPTEFFFHA
MGGREGLIDTAVKTAETGYIQRRLIKSMESVMVKYDATVRNSINQVVQLRYGEDGLAGES
VEFQNLATLKPSNKAFEKKFRFDYTNERALRRTLQEDLVKDVLSNAHIQNELEREFERMR
EDREVLRVIFPTGDSKVVLPCNLLRMIWNAQKIFHINPRLPSDLHPIKVVEGVKELSKKL
VIVNGDDPLSRQAQENATLLFNIHLRSTLCSRRMAEEFRLSGEAFDWLLGEIESKFNQAI
AHPGEMVGALAAQSLGEPATQMTLNTFHYAGVSAKNVTLGVPRLKELINISKKPKTPSLT
VFLLGQSARDAERAKDILCRLEHTTLRKVTANTAIYYDPNPQSTVVAEDQEWVNVYYEMP
DFDVARISPWLLRVELDRKHMTDRKLTMEQIAEKINAGFGDDLNCIFNDDNAEKLVLRIR
IMNSDENKMQEEEEVVDKMDDDVFLRCIESNMLTDMTLQGIEQISKVYMHLPQTDNKKKI
IITEDGEFKALQEWILETDGVSLMRVLSEKDVDPVRTTSNDIVEIFTVLGIEAVRKALER
ELYHVISFDGSYVNYRHLALLCDTMTCRGHLMAITRHGVNRQDTGPLMKCSFEETVDVLM
EAAAHGESDPMKGVSENIMLGQLAPAGTGCFDLLLDAEKCKYGMEIPTNIPGLGAAGPTG
MFFGSAPSPMGGISPAMTPWNQGATPAYGAWSPSVGSGMTPGAAGFSPSAASDASGFSPG
YSPAWSPTPGSPGSPGPSSPYIPSPGGAMSPSYSPTSPAYEPRSPGGYTPQSPSYSPTSP
SYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP
TSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS
YSPTSPNYSPTSPNYTPTSPSYSPTSPSYSPTSPNYTPTSPNYSPTSPSYSPTSPSYSPT
SPSYSPSSPRYTPQSPTYTPSSPSYSPSSPSYSPTSPKYTPTSPSYSPSSPEYTPTSPKY
SPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTS
PKYSPTSPTYSPTSPKGSTYSPTSPGYSPTSPTYSLTSPAISPDDSDEEN
NT seq
5913 nt
NT seq
+upstream
nt +downstream
nt
atgcacgggggtggccccccttcgggggacagcgcatgcccgctgcgcaccatcaagaga
gtccagttcggagtcttgagtccggatgaactgaagcgaatgtctgtgacggagggtggc
atcaaatacccagagacgactgagggaggccgccccaagcttggggggctgatggacccg
aggcagggggtgattgagcggactggccgctgccagacatgcgcaggaaacatgacagag
tgtcctggccactttggccacattgaactggccaagcctgtgtttcacgtgggcttcctg
gtgaagacaatgaaggttttgcgctgtgtctgcttcttctgctccaaactgcttgtggac
tctaacaacccaaagatcaaggacatcctgtctaagtccaagggacagcccaagaagcgg
ctcacacatgtctacgacctttgcaagggcaaaaacatctgcgagggtggggaggagatg
gataacaagtttggtgtggaacaacctgagggtgacgaggatctgaccaaagaaaagggc
catggtggctgtgggcggtaccagcccaggatccggcgttccggcctagagctgtatgcg
gaatggaagcatgttaatgaggactctcaggagaagaagatcctgctgagtccagagcga
gtgcatgagatcttcaaacgcatctcagatgaggagtgttttgtgctgggcatggagccc
cgctatgcacgaccagagtggatgattgtcacagtgctgcctgtgcccccactttccgtg
cggcctgctgttgtgatgcagggctctgctcgtaaccaggatgacctgactcacaaactg
gctgacattgtgaagatcaacaatcagctgcggcgcaatgagcagaacggcgcagcggcc
catgtcatcgcagaggatgtgaagctcctccagttccatgtggccaccatggtggacaat
gagctgcctggcttgccccgtgccatgcagaagtctgggcgtcccctcaagtccttgaaa
cagcggttgaagggcaaggaaggccgggtgcgagggaacctgatgggcaaacgagtggac
ttctcggcccgcactgtcatcactcccgaccccaacctctccattgaccaggtcggcgtg
ccccgctccattgccgccaatatgacctttgcggagattgtcacccctttcaacattgac
agacttcaagaactagtgcgcagggggaacagccagtacccgggggccaagtacatcatc
cgagacaatggcgatcgcattgacttgcgtttccaccccaagcccagtgaccttcacctg
cagaccggctataaggtggaacggcacatgtgtgatggggacattgttatcttcaaccgg
cagccaactctgcacaaaatgtccatgatggggcatcgggtccgcatcctcccctggtct
acctttcgcttgaatctgagtgtgacaactccatacaatgcagactttgatggggatgag
atgaacttgcacctgccgcagtctctggagacgcgggcagagatccaggagctggccatg
gttcctcgcatgattgtcaccccccagagcaaccggcctgtcatgggtatcgtgcaggac
acactcacagcagtgcgcaaattcaccaagagagacgtcttcctggagcggggtgaagtg
atgaacctcctgatgttcctgtcaacgtgggacgggaaggtgccacagccggccatcctg
aagccccggcccctgtggacaggcaagcagatcttctccctcatcatacctggtcacatc
aattgtatccgtacccacagcacccaccccgatgatgaagacagcggcccttacaagcac
atctctcctggggacactaaggtggtggtggagaacggggagctgatcatgggcatcctg
tgtaagaagtctctgggcacgtcagctggttccctggtccacatatcctacctagagatg
ggccatgacatcactcgcctcttctactccaacattcagaccgtcattaacaactggctc
ctcatcgagggtcataccattggcattggggactctattgctgattctaagacttaccag
gacattcagaacactattaagaaggccaagcaggatgtaatagaggtcatcgagaaggca
cacaacaacgagctggagcccaccccagggaacactctgcggcagacctttgagaatcag
gtgaaccgcattcttaatgatgcccgagacaagactggctcctctgctcagaaatccctg
tctgaatacaacaacttcaagtctatggtcgtgtctggagctaaaggttccaagattaac
atctcccaggtcattgctgtcgtcgggcagcagaacgtggagggcaaacggattccattt
ggcttcaagcaccggactctgcctcacttcatcaaggatgactacgggcccgagagccgt
ggctttgtggagaactcctacctagccggcctcacccccaccgagttctttttccacgcc
atggggggtcgtgaggggctcattgacacggctgtcaagactgctgagactggatacatc
cagcggcgactgatcaagtccatggagtcagtgatggtgaagtacgacgcgactgtgagg
aactccatcaaccaggtggtgcagctgcgctacggtgaagacggcctggcaggcgagagc
gttgagttccagaacctggctacgctgaaaccttccaacaaggcttttgagaagaagttc
cgctttgattataccaatgagagggccctgcggcgcactctgcaggaggacctggtgaag
gacgtgctgagcaacgcacacatacagaacgagttggagcgggaatttgagcggatgcgg
gaggatcgggaggtgctcagggtcatcttcccaactggagacagcaaggttgtcctcccc
tgtaacctgctgcggatgatctggaacgctcagaaaatcttccacatcaacccacgcctt
ccctccgacctgcaccccatcaaagtggtggagggagtcaaggaattgagcaagaagctg
gtgattgtgaatggggatgacccactaagtcggcaggcccaggaaaatgccacgctgctc
ttcaacatccacctgcggtccacgttgtgttcccgccgcatggcggaggagtttcggctc
agtggggaggccttcgactggctgcttggggagattgagtccaagttcaaccaagctatt
gcccatcctggggaaatggtgggagctctggctgcacagtcccttggagaacctgccacc
cagatgaccttgaataccttccactatgctggtgtgtctgccaagaatgtgacactgggt
gtgccccgacttaaggagctcatcaacatttccaagaagccaaagaccccttcacttacc
gtcttcttgttgggccagtctgctcgagatgctgagagagccaaggatattctatgccgc
ctggagcatacaacgttgaggaaggtgactgccaacacagccatctactatgaccccaac
ccccagagcacggtggtggcagaggaccaagagtgggtgaatgtctactatgaaatgcct
gactttgatgtggcccgaatctccccctggctgttgcgggtggagctggatcggaagcac
atgactgatcggaagctgaccatggagcagattgctgaaaagatcaatgctggttttggt
gatgacttgaactgcatctttaacgatgacaacgcagagaagctggtgctccgtattcgc
atcatgaacagcgatgagaacaagatgcaggaggaggaagaggtggtggataagatggat
gatgatgtcttcctgcgctgcattgagtccaacatgctgacagatatgaccctgcagggc
atcgagcagatcagcaaggtgtacatgcacttgccacagacagacaacaagaagaaaatc
atcatcacagaggacggggaattcaaggccctgcaggagtggatcctggagacggacggc
gtgagcttgatgcgggtgctgagtgagaaggatgtggaccccgtgcgcaccacgtccaat
gacatcgtggagatcttcacggtgctgggcattgaagctgtgcggaaggccctggagcgg
gagctgtaccatgtcatctcgtttgatggctcctatgtcaattaccgacacttggctctc
ttgtgtgataccatgacctgtcgtggccatttgatggccatcacccgacacggagtcaac
cgccaggacacaggaccactcatgaagtgttcctttgaggaaacggtggatgtgcttatg
gaagcagccgcacacggcgagagcgaccccatgaagggggtctctgagaatatcatgctg
ggccagctggctccagccggcactggctgctttgacctactgcttgatgcagagaagtgc
aagtatggcatggagatccccaccaatatccccggcctgggggctgctggacccaccggc
atgttctttggctcagcacccagtcccatgggtggaatctctcctgccatgacgccttgg
aaccagggtgcaacccctgcctacggcgcctggtcccccagtgttgggagtggaatgacc
ccaggggcagctggcttctctcccagtgctgcatcagatgccagtggcttcagcccaggt
tactcccctgcctggtctcccacacccggctccccggggtccccgggtccctcaagccct
tacatcccttcaccaggtggtgccatgtctcccagctactcgccaacatcacctgcctat
gagccccgctctcctgggggctacacaccccagagtccctcttattcccccacttcaccc
tcctactcccctacctctccatcatattctccaaccagtcccaactatagtcccacatca
cccagctactcaccgacctctcccagctactcgcccacctctcccagctactcacccacc
tctcccagctactcacccacctctcccagctactcacccacctctcccagctactcgccc
acttcccctagctactcgcccacctctcccagctactcgccgacatctcccagctactcg
ccgacatctcccagctactcaccaacttcacccagctattctcccacttcccccagctac
tcaccaacctctccaagctattcacccacctcccccagctactcacccacttccccaagt
tactcacccaccagcccgaactattctccaaccagtcccaattataccccaacgtcaccc
agctacagcccaacatcacccagctattcacctactagtcccaactacacgcctaccagc
cctaactacagcccaacctctccaagctactctccaacatcacccagttattccccgacc
tcaccaagttactccccttccagcccacgatacacaccacagtctccaacctatacccca
agctcacccagctacagccccagctcgcccagctacagcccaacctcacccaagtacacc
ccaaccagtccttcctacagtcccagctccccagagtataccccaacctcccccaagtac
tcacctaccagtcccaaatattcacccacctctcccaagtactctcctaccagtcccacc
tattcacccaccaccccaaaatactccccaacatcccctacttattccccaacctctcca
gtctacaccccaacctctcccaagtactcacctactagtcccacttactcgcccacttct
cccaagtactcacccaccagccccacctactcgcccacctctcccaaaggctcgacttac
tctcccacttcccctggttactcgcccaccagccccacctacagcctcaccagcccggcc
atcagcccggatgacagcgatgaggagaactga
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integrated database retrieval system
