Methanosarcina thermophila CHTI-55: MSTHC_2305
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Entry
MSTHC_2305 CDS
T03891
Name
(GenBank) DNA-directed RNA polymerase subunit A'
KO
K03041
DNA-directed RNA polymerase subunit A' [EC:
2.7.7.6
]
Organism
mthe
Methanosarcina thermophila CHTI-55
Pathway
mthe03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
mthe00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
MSTHC_2305
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mthe03021
]
MSTHC_2305
Enzymes [BR:
mthe01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
MSTHC_2305
Transcription machinery [BR:
mthe03021
]
Prokaryotic type
Archaeal type
RNA polymerase
Core subunits
MSTHC_2305
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
RNA_pol_Rpb1_5
Motif
Other DBs
NCBI-ProteinID:
AKB16623
UniProt:
A0A0E3KS77
LinkDB
All DBs
Position
complement(2820825..2823389)
Genome browser
AA seq
854 aa
AA seq
DB search
MSATPIITADTYDDDGFPIDMGLMDTRLGVIDPGLRCKTCSGRAGECPGHFGHIELVAPV
VHVGFNKVIRKLLRATCRKCSRLLLEPAQKQYFLEHLSGIEEIGHMPDDLINEAYKEASK
VKVCPYCNEEQLEIKFEKPTEYLENGEKLTPTEIRDRFENIPDEDIQVIGMDPKNARPEW
MILTVLPVPPVTVRPSITLESGQRSEDDLTHKLVDIIRINQRFQENREAGAPQLIIEDLW
ELLQYHVTTFFDNSVSGIPPARHRSGRPLKTLSQRLKGKEGRFRGSLSGKRVNFSARTVI
SPGPNLSINEVGVPLPIARTLTLPVMVTPRNIEQLKIYVRNGEDIHPGANYVLRPDGRRI
KVTNMNKEDLAEKLEFGWIVERQLKDGDTVLFNRQPSLHKMSIMAHSVKVLPDKTFRLNP
AVCPPYNADFDGDEMNLHALQTEESRAEAKILMQVQENILSPRFGGPIIGGIHDHISGLF
LLTRFENHISKHDAYDLLRKSSVRTLPEPAGYDPDGEPYWTGKQIFSQILPESLNLKFTA
QVCSHCDTCKKEECPNDAYVVIRNGKLITGTIDEAAIGAFKGKIQDRIVKEIGPEAGARF
VDDMTRLAIRALMRTGLSFGIADEDIPREAKIQINEVLEKAEETVQNLIKSYQNKELEPL
PGRTLDETIEMSIMQKLGKARDDTGNIADSHMGLENPAVIMARSGARGSILNLTQMAACV
GQQAVRGERIRRGYTGRTLPHFEKGDLGSEAHGFVKSSYKSGLNPTEYFFHAIGGREGLV
DTAVRTSQSGYLQRRLVNALQDLEVQYDLTVRDTRGVLVQFKFGEDGINPTKSDFSKPET
VHRIVNSVVNKEVA
NT seq
2565 nt
NT seq
+upstream
nt +downstream
nt
atgagcgcaacgccaattatcacagctgacacgtatgacgatgacggattcccaattgac
atggggcttatggacacgagactcggggttattgaccccgggcttcgctgcaaaacttgc
tcagggagagcaggcgaatgtccaggacacttcggacatattgaacttgttgctccagta
gtccatgtaggtttcaacaaagtaatccgaaaactcctcagggcaacctgcaggaaatgc
agcaggcttctccttgagcctgcacagaaacagtactttctggagcacctttcaggtatt
gaggaaatcgggcatatgcctgatgacctgatcaatgaggcatacaaggaagccagcaaa
gtaaaggtctgtccttactgcaatgaggaacagctcgaaattaaattcgaaaaacccact
gaataccttgagaatggggagaagctgacacctactgaaataagggaccgcttcgagaac
attcctgacgaggatattcaggttatcggaatggatccgaagaatgcaagacctgaatgg
atgattcttacagttctgcctgtacctcctgttacggttcgtccttcaattacccttgaa
tccgggcagcgcagtgaagacgacctgacacacaagctggtagacattatcaggataaac
cagcgcttccaggaaaacagggaagcaggcgcccctcagctcattattgaggatctctgg
gaactccttcagtatcacgttacaaccttctttgacaattccgtttcaggaatacctccg
gcaaggcacaggtcaggcagacctttaaaaaccctttcccaacgtttgaagggtaaggaa
ggacgtttcagaggaagtctatcaggtaaacgtgttaacttctccgcccgtaccgtaatc
tctccaggtcccaaccttagcattaatgaggtaggggttcctctgcccattgcgcgtacc
ctgacactgcccgttatggtaacaccaaggaacatagagcagctcaagatttacgtgcgc
aatggtgaggatatacaccccggagcaaattatgtactgcgtcctgacggcaggcgtata
aaagtcaccaatatgaataaagaagaccttgccgaaaaactggagttcggatggatagtt
gaacgacagttgaaggatggggatactgttctctttaacaggcagccctctctgcacaag
atgagcattatggctcattctgtaaaggtgcttccggataaaacattcaggctgaaccct
gcagtatgccctccgtataacgctgactttgatggggatgagatgaacctgcatgcctta
cagactgaagagtccagagctgaggcaaagattctcatgcaggttcaggaaaatattctt
tccccacgtttcggaggtcccattataggcgggattcacgaccatatttcagggcttttc
ctgctgacacgctttgaaaaccacatctccaagcatgacgcttacgatcttcttcggaag
agcagtgtccgaactctgccagagcctgcagggtatgatcctgatggagaaccctactgg
acaggaaagcagatcttcagccagatcctgcccgaaagcctgaatttgaagtttacagct
caggtctgctcacactgtgacacctgtaaaaaggaagaatgtccgaacgatgcctatgtg
gtaatccggaacgggaagctcatcactggcacaatagatgaggcagctataggagcattt
aaaggaaagatccaggatcgcattgtcaaggagataggccctgaggccggagcccgcttt
gtggatgatatgacaagacttgcaattcgagctctcatgcggacaggcctgagtttcgga
atagctgatgaagacattccgagagaagcgaagatccagatcaatgaagttctcgaaaaa
gctgaggagactgtgcagaatctcattaaatcttaccagaacaaggaacttgaacccctt
ccaggaagaacccttgatgaaacgattgaaatgagcattatgcagaagctcgggaaagcc
agggacgataccggtaacatagcagacagtcacatgggacttgaaaaccctgctgttatt
atggcacgttcaggagccagaggttccatcctgaaccttacccagatggcagcctgtgtt
ggacagcaagccgtgcgtggtgaacgtatccgcagaggatatacaggcaggacattgccc
catttcgaaaagggagaccttggttcagaagctcatgggttcgtaaagtcaagctacaag
agcgggcttaaccctactgaatacttcttccacgcaattggtggtagggaagggcttgta
gacactgcggtcagaacatcacagtcagggtacctgcagagaaggcttgtcaacgctctt
caggacctggaagttcagtatgaccttacagtaagggatacaagaggcgtgctcgtacag
ttcaagtttggagaagacgggattaaccccacgaaaagcgattttagcaaacccgagacg
gtccacaggattgtcaactcggtagtaaacaaggaggtggcctga
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