Mixta theicola: C7M52_02157
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Entry
C7M52_02157 CDS
T06402
Symbol
alkA
Name
(GenBank) putative bifunctional transcriptional activator/DNA repair enzyme AlkA
KO
K13529
AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
mthi
Mixta theicola
Pathway
mthi03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
mthi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
C7M52_02157 (alkA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mthi03000
]
C7M52_02157 (alkA)
03400 DNA repair and recombination proteins [BR:
mthi03400
]
C7M52_02157 (alkA)
Enzymes [BR:
mthi01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
C7M52_02157 (alkA)
Transcription factors [BR:
mthi03000
]
Prokaryotic type
Helix-turn-helix
AraC family
C7M52_02157 (alkA)
DNA repair and recombination proteins [BR:
mthi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
C7M52_02157 (alkA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AlkA_N
Ada_Zn_binding
HTH_18
HhH-GPD
HTH_AraC
RecR_HhH
Motif
Other DBs
NCBI-ProteinID:
QHM76194
LinkDB
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Position
2411671..2413128
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AA seq
485 aa
AA seq
DB search
MINGDIAWQALTSRDARFDGVFFVGVTSTGIYCRPVCPVRAPRRENCRFFTSAEAAEKAA
FRPCLRCRPELAPGNAPVDSAHRITDLLLRRIDEGQLDATDSLEEVAAWFHLSLRQLRRI
VQQELGVSPLELKQTRRLLLAKQLLTETRLPVTEVAFASGFSSLRRFNDLFSQRYRMPPS
RLRKLASGETAADLSGSSTLLLNYRPPYDWQAMLDFLRLRALKNVESVDEEGYMRTVQLG
RYRGWIRVTHAADKPALQVEFSHTLNGALPALLRRLRNLFDLDAHPQCIDDRLREDPLLM
ESIKRNPGLRVPGAFDGFEMTVRAVLGQQITVKAATTLGGRFASAFGEKAETPFAELTRL
APQPSRVASATVDEIASLGIVSARARSILALAAACNEGELQLEASANPEEMMQRLRQLPG
IGEWTASYIAMRALRWPDAFPAGDIAIRNNLGGISARQAEARSAQWRPWRSYAVMHIWKN
LNMKK
NT seq
1458 nt
NT seq
+upstream
nt +downstream
nt
atgattaacggcgatatcgcctggcaggcgttaacttcaagggatgcgcgttttgacggc
gtatttttcgtcggcgtaacctcaaccggcatttactgtcgcccggtctgtccggtcagg
gcgccacgccgcgaaaactgccgttttttcaccagcgcggaagcggcggaaaaagccgct
tttcgcccctgcctgcgctgccgcccggagctggcccccggcaacgcgccggtggacagc
gcgcaccgcattactgatttgctgctgcgacgcatcgatgagggccagcttgacgccacc
gacagcctggaagaggtagccgcctggtttcacctcagcctgcgtcagctaagacgcatc
gtgcagcaggagctgggcgtatcgccgctggagctgaaacagacgcgacgtctgctgctg
gctaaacagctacttaccgaaacgcgcctgccggtcactgaagttgccttcgccagcggc
ttcagcagcctgcgacgcttcaacgatctttttagccagcgctaccggatgccgcccagc
cgcctgcgcaagctggcaagcggcgaaaccgctgccgatctcagcggttcgtccacgctg
ctgctcaactaccgtcccccctatgactggcaggcgatgcttgatttcctgcgcctgcgc
gcgctgaaaaatgtggaatcggttgatgaggagggctatatgcgcaccgtgcagctgggg
cgctaccgcggctggattcgcgttacccacgccgcagacaaaccggcgctgcaggtggaa
ttttcccacacgcttaacggcgccctgcccgcactgctgcgccgcttgcgcaacctgttc
gatctggatgcgcatccccaatgtattgacgatcgtctgcgtgaggatccgttactgatg
gagagcatcaagcgtaaccctggcctgcgcgtgcccggcgcctttgatggttttgagatg
acggtgcgcgcggtgctcggccagcagatcaccgtcaaagcggcgacgacgctgggcgga
cgctttgccagcgcctttggcgagaaggcggaaacgccctttgccgaactgacccgtctg
gctcctcagccgtcacgcgtagccagcgcgacggttgacgagatcgccagcctggggatt
gtgagcgcccgcgctcgctctattctggcgctggccgccgcctgcaacgagggcgagcta
cagctggaggccagcgccaatcctgaagagatgatgcagcgcctgcgtcagctgccaggc
attggtgaatggaccgcctcttatatcgccatgcgcgcgctgcgctggccggatgccttt
cccgccggggatatcgcgatcaggaataatctgggcggcatcagcgccaggcaggcggaa
gcgcgctctgcgcagtggcgtccctggcgcagctatgcggtgatgcatatctggaaaaat
ttaaatatgaagaaatag
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