KEGG   Neomoorella thermoacetica DSM 521: MOTHE_c10770
Entry
MOTHE_c10770      CDS       T06431                                 
Symbol
hfq
Name
(GenBank) RNA-binding protein Hfq
  KO
K03666  host factor-I protein
Organism
mtho  Neomoorella thermoacetica DSM 521
Pathway
mtho02024  Quorum sensing
mtho03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:mtho00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    MOTHE_c10770 (hfq)
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    MOTHE_c10770 (hfq)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:mtho03019]
    MOTHE_c10770 (hfq)
   03036 Chromosome and associated proteins [BR:mtho03036]
    MOTHE_c10770 (hfq)
Messenger RNA biogenesis [BR:mtho03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Chaperones
     MOTHE_c10770 (hfq)
Chromosome and associated proteins [BR:mtho03036]
 Prokaryotic type
  Nucleoid associated proteins
   Other nucleoid associated proteins
    MOTHE_c10770 (hfq)
SSDB
Motif
Pfam: Hfq Hfq_1 LSM
Other DBs
NCBI-ProteinID: AKX93879
UniProt: A0A1D7XA38
LinkDB
Position
1039949..1040203
AA seq 84 aa
MNKTQGNLQDLFLNVLRRDNTPVTIYLVNGFQLKGVVRGFDNFTVVLDADGKQQMIYKHA
ISTIMPFRPVNLMAESRAQAEAKQ
NT seq 255 nt   +upstreamnt  +downstreamnt
atgaataaaacccaaggaaacctgcaggatttgtttttaaacgtcttgcgtagggacaat
acccccgtaaccatttacctggtcaatggctttcagttaaaaggtgtggtacggggcttc
gacaattttaccgtcgtcctggacgccgacggcaaacagcagatgatttacaaacatgcc
atatcaaccatcatgccctttcggccggtcaacctcatggctgaaagccgggcccaggcc
gaggccaagcagtaa

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