KEGG   Mycobacterium tuberculosis Beijing/NITR203: J112_15120
Entry
J112_15120        CDS       T02616                                 
Name
(GenBank) CRISPR-associated protein cas10/csm1, subtype III-a/mtube
  KO
K07016  CRISPR-associated protein Csm1
Organism
mtj  Mycobacterium tuberculosis Beijing/NITR203
Brite
KEGG Orthology (KO) [BR:mtj00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:mtj02048]
    J112_15120
Prokaryotic defense system [BR:mtj02048]
 CRISPR-Cas system
  Type III CRISPR-Cas system
   Type III signiture cas proteins
    J112_15120
SSDB
Motif
Pfam: Csm1_B Cmr2_hel_dom2 HD mCpol DUF2616 Vps39_1 RecR_ZnF
Other DBs
NCBI-ProteinID: AGJ68925
LinkDB
Position
complement(3129033..3131462)
AA seq 809 aa
MNPQLIEAIIGCLLHDIGKPVQRAALGYPGRHSAIGRAFMKKVWLRDSRNPSQFTDEVDE
ADIGVSDRRILDAISYHHSSALRTAAENGRLAADAPAYIAYNIAAGTDRRKADSDDGHGA
STWDPDTPLYSMFNRFGSGTANLAFAPEMLDDRKPINIPSPRRIEFDKDRYAAIVNKLKA
ILVDLERSDTYLASLLNVLEATLSFVPSSTDASEVVDVSLFDHLKLTGALGACIWHYLQA
TGQSDFKSALFDKQDTFYNEKAFLLTTFDVSGIQDFIYTIHSSGAAKMLRARSFYLEMLT
EHLIDELLARVGLSRANLNYSGGGHAYLLLPNTESARKSVEQFEREANDWLLENFATRLF
IATGSVPLAANDLMRRPNESASQASNRALRYSGLYRELSEQLSAKKLARYSADQLRELNS
RDHDGQKGDRECSVCHTVNRTVSADDEPKCSLCQALTAASSQIQSESRRFLLISDGATKG
LPLPFGATLTFCSRADADKALQQPQTRRRYAKNKFFAGECLGTGLWVGDYVAQMEFGDYV
KRASGIARLGVLRLDVDNLGQAFTHGFMEQGNGKFNTISRTAAFSRMLSLFFRQHINYVL
ARPKLRPITGDDPARPREATIIYSGGDDVFVVGAWDDVIEFGIELRERFHEFTQGKLTVS
AGIGMFPDKYPISVMAREVGDLEDAAKSLPGKNGVALFDREFTFGWDELLSKVIEEKYRH
IADYFSGNEERGMAFIYKLLELLAERDDRITKARWVYFLTRMRNPTGDTAPFQQFANRLH
QWFQDPTDAKQLKTALHLYIYRTRKEESE
NT seq 2430 nt   +upstreamnt  +downstreamnt
atgaacccgcaactcatcgaggccataatcggctgcctcttgcacgacattggcaaaccg
gtccagcgcgcggcgctcggctacccgggcaggcacagtgcgattggccgcgcttttatg
aagaaggtgtggttgcgcgacagccgcaatccgtcgcagttcaccgacgaggtggatgag
gctgacattggggtctccgaccgccgcattctcgacgcgatcagctatcaccacagttct
gcgctgcgtacggcggccgagaatggccgccttgccgccgatgcgccggcctacatcgcc
tacaatatcgcggccggaaccgaccgccgcaaggccgactccgacgacggccatggtgcg
agcacttgggatccggacacgcccctgtattcgatgttcaaccgattcggctccggcaca
gcgaatctggcatttgccccggagatgctcgacgaccgcaagccgatcaatataccgtcg
ccacgccggatcgaattcgacaaggaccgctacgccgccatcgtcaacaaacttaaagcc
attctggtcgacctcgaacgttccgacacctacctcgccagcctcctcaacgtcctcgag
gcgacgctgtcgttcgtgccgtcctcgaccgacgcgtccgaggtcgtcgacgtctcactc
ttcgaccacctgaagctgacgggtgcgctcggcgcctgcatctggcactacctacaagcc
accggacaaagcgacttcaagtcagcgctgttcgacaagcaggacaccttctacaacgaa
aaagccttcctgctcacaactttcgacgtctcaggcatccaggacttcatctacacgatc
cattcctcgggtgccgcgaagatgctgcgtgcccgcagcttctacctggagatgctgacc
gagcatctcatcgacgagctacttgcgcgggtgggtctcagccgcgcgaatctcaactac
tccggcggcgggcacgcgtacctgctgctgcccaacacggagtccgcgcggaaatccgtc
gaacagttcgagcgtgaggccaacgactggctgctggaaaacttcgcaacccggctcttc
atcgccacgggcagcgtaccgcttgccgcgaacgacctgatgcgtcggccgaacgagagt
gcgagccaggcaagtaaccgcgccctccgctacagcgggctctaccgtgagttgagcgag
caactttccgcgaagaagctcgcccgatacagcgctgaccaactgcgggaactcaactcg
cgcgatcacgacggtcagaaaggtgaccgggaatgcagcgtgtgccacacggtcaaccgc
acggtcagcgccgacgacgagccaaagtgcagcctgtgccaagcgctgaccgctgcgtct
tcgcagattcaatccgagtctcgccgcttcctactcatctctgacggcgccaccaaaggt
ctgcccctgccgttcggcgccacactcacgttctgtagccgagccgacgccgataaggca
ctccagcaaccccaaacccgaaggcggtacgcgaagaacaagttcttcgccggcgagtgt
ttgggcaccgggctctgggtgggcgactacgtcgcacagatggagttcggtgactacgtg
aagcgtgcgagcggaatcgcgcgcctcggggttctgcgccttgacgtcgataacctgggc
caggcattcacgcacggcttcatggagcaaggcaacggcaagttcaacacgattagccgc
acggccgcgttctcccggatgctgtcgttgttcttccggcagcacatcaactacgtgttg
gcacgcccgaaactgcgcccgatcaccggcgatgacccggcgcggccccgcgaggccacg
atcatctactccggtggcgatgacgtcttcgtcgtgggcgcgtgggacgacgtcatcgag
ttcgggatcgagcttcgggagcggttccacgaattcacccagggcaaactcaccgtgtcg
gctggcatcggcatgttccccgacaagtaccccatctccgtgatggcccgcgaagtcgga
gatctcgaagacgcggcgaagtcgctgcccggcaagaacggggttgcactcttcgatcgc
gagttcaccttcggctgggatgagctgctcagcaaggtgatcgaggagaagtaccggcac
atcgccgactatttcagtggcaacgaagaacgcggcatggccttcatctacaagctgctc
gaactactcgccgaacgcgacgatcgaatcacaaaggccagatgggtgtacttcctcacg
cgcatgcgtaaccccaccggtgacacagcgccttttcagcagtttgctaaccggctacac
caatggttccaagatccgacagacgccaagcaactcaagaccgcgctgcacctctacatc
tatcgcactcgcaaggaggagtccgaatga

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