Thermothelomyces thermophilus: MYCTH_2139555
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Entry
MYCTH_2139555 CDS
T02231
Name
(RefSeq) hypothetical protein
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
mtm
Thermothelomyces thermophilus
Pathway
mtm03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
mtm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
MYCTH_2139555
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mtm03400
]
MYCTH_2139555
Enzymes [BR:
mtm01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
MYCTH_2139555
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
MYCTH_2139555
DNA repair and recombination proteins [BR:
mtm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
MYCTH_2139555
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
Fpg-like_C
NFACT_N
Ribosomal_S13
Motif
Other DBs
NCBI-GeneID:
11513623
NCBI-ProteinID:
XP_003664070
JGI:
2139555
UniProt:
G2QHG5
LinkDB
All DBs
Position
4:complement(join(1969072..1970003,1970065..1970114,1970162..1970336,1970389..1970407))
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AA seq
391 aa
AA seq
DB search
MPEIAEIARVVHYLRLHLVGKKIKTATAVEDNNVFGKVGTTGAEVSRALTGKKVLSAGTQ
GKYFWLVLDQPPHPVMHFGMTGWIHIKGDRTAYTNYYKKMKPEEMDLWPPKYWKFHLITE
NPAVEVAFTDPRRFGRVRLVDCPGESIRKFSPLVENGTDPVVDTDVFTEDYLREKMRSRH
VPIKALILDQTIISGIGNWVGDEVLYQAKLHPEQYCDDFSDEQITRLYKSIRHVCQFAVD
KLGDSDQFPEDWLFHYRWEKGQKGGVGHLPSGEKLAFLTVGGRTSCYVPEIQKKSGRIVP
GVKEEPIESDLEKEKPKKVVRAKDAIAEDAMPKSKKRKAEKDEIPAKRSRATPKKSATSE
SQATKGEVAERIGSNVEHGRRRSSRLQRKTA
NT seq
1176 nt
NT seq
+upstream
nt +downstream
nt
atgcctgagattgcggagatcgctcgagtggtgcactacctgcggttgcacttggttggg
aagaaaatcaagaccgccactgcggtagaggataacaatgtttttggcaaagtcggaacg
acgggagcggaggtctccagggcactcaccggaaagaaagttctatcagcggggacacaa
ggcaaatacttctggcttgttctcgatcagccgcctcatcctgtgatgcattttggaatg
acaggctggatccacatcaaaggggatcgaaccgcatataccaactattacaagaagatg
aagccggaagaaatggatctctggcccccgaaatactggaagttccacctgataaccgag
aacccggcagttgaggttgccttcacagatccccgccgctttggccgtgtgcgcctcgtg
gattgcccgggcgagagcatcaggaagttctccccgctcgtagaaaacggcactgacccg
gtcgttgacaccgacgttttcactgaggactacctccgagaaaagatgcgctcgcgccat
gttccaatcaaggcgctcattcttgaccagaccatcatcagcgggatcggcaactgggta
ggcgacgaggtcctctaccaggcgaagctgcatccagaacaatactgcgatgactttagc
gatgagcagataacaaggctctacaaatccattcgtcatgtctgtcaatttgccgtcgac
aagctcggggattctgaccaatttcccgaggactggctgttccactaccgatgggaaaaa
ggtcagaaggggggagtgggccatttgcccagcggcgagaagctggcctttctcacagta
ggggggaggacaagctgctatgtgccggagatacaaaagaagagtggtcgcattgttccc
ggcgtcaaggaggaacccatcgagtctgacctggagaaggaaaaacccaagaaagttgtt
agggcaaaggacgcaattgcagaggacgctatgccgaaaagcaaaaagaggaaggcagaa
aaggacgagataccagcaaaaaggagcagagctacccccaagaagtctgcgacgagcgaa
tcgcaggccactaagggggaagttgcggaaaggataggcagcaatgtcgagcacggcagg
cggcggtcaagcaggctgcaaaggaaaaccgcgtga
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