Thermothelomyces thermophilus: MYCTH_2301666
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Entry
MYCTH_2301666 CDS
T02231
Name
(RefSeq) hypothetical protein
KO
K15322
tRNA-splicing endonuclease subunit Sen2 [EC:
4.6.1.16
]
Organism
mtm
Thermothelomyces thermophilus
Brite
KEGG Orthology (KO) [BR:
mtm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mtm03016
]
MYCTH_2301666
Enzymes [BR:
mtm01000
]
4. Lyases
4.6 Phosphorus-oxygen lyases
4.6.1 Phosphorus-oxygen lyases (only sub-subclass identified to date)
4.6.1.16 tRNA-intron lyase
MYCTH_2301666
Transfer RNA biogenesis [BR:
mtm03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing endonuclease complex
MYCTH_2301666
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_int_endo
tRNA_int_endo_N
DUF1771
Motif
Other DBs
NCBI-GeneID:
11510621
NCBI-ProteinID:
XP_003661816
JGI:
2301666
UniProt:
G2Q9W2
LinkDB
All DBs
Position
2:3242864..3244933
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AA seq
689 aa
AA seq
DB search
MAAANGTVAAKISEGAPTARNQSSGVATGERASPTRPALHQIYALPAPIRTFPLPTFYPS
NPISLLYLVYTWLSHVLRPPPREPSVIHTGVWDAETRSVHVRDDSSIRALWEQGFYGKGS
LSRSEPNWLKRELARRGSPEGKTVSEARTEMRREERRLAKWERAKAELEAIERQRLAEAA
SQASDSGSSKLAGGLSKPAEVADTSANPAHSTIVEPAGTVEGTSAEAAPAEAARPPHAGA
QPASHARNWDFKPPVGPAELLALPNSLAKPKCPEDGSISDRLRKHPLDGKPPVGPAELVM
LPNSNAELMGPVSRRIGGLAVSESETSAPDQRVLQTALDPNGDAKAFDSQPSTNGMVDGV
VPKASASVASQDVDEMFINGAAENESVEERSSPPSTLSDGPTSDSSAPGLEGDVSQPQER
RKSVRFSPTVESAAFLRSDPPSPGRSADLSSKSVSSSALPNGGVATLEPEVPSPIPPAAA
PGTSSTADVSRDTSTSVVNREHFQLAPEEAFFLAFSLGALKVVDPVTGSPISTEHLLQLF
RAHSYFPPRLASSDLRPDDPFLVNYAVYHHFRSLGWVPRHGIKFGVDWILYQRGPVFDHS
EFGVMVMPAYSDPAWEGYGHEEPKRSWSWLMGVNRVLSHVLKSLVLVYVDLPSPAVFEKE
MQRGGIAAALKKYTIREVMVRRFSINRNR
NT seq
2070 nt
NT seq
+upstream
nt +downstream
nt
atggctgccgccaatggcaccgtcgccgccaagatcagcgaaggggccccgacggccagg
aaccaaagttctggcgtagccactggggagcgtgcgtcacccaccagaccggcactacac
cagatctatgctctccctgctccaattcggacctttcccctccccacattttacccgagt
aatccgatctcgctgctgtatttggtctatacctggctgagccatgtcttgcgacctcct
ccacgcgagccgtcggttatacacactggcgtgtgggacgcggaaacgcgctcggtgcat
gtcagagacgattcgtcgatacgcgcgctctgggagcaaggcttctacggaaaggggagc
ctcagtcgaagtgagccaaactggctcaagcgagagctggcccgacggggctcgccggaa
ggcaagaccgtcagcgaggcacgcacggagatgcggcgagaggagcgccgtctggccaag
tgggagagagcgaaagccgaattggaagccattgagaggcagaggttggcagaggccgcc
tctcaggcctctgatagcggatcgagcaagttggccggagggcttagcaagcccgccgag
gtagcagatacatctgccaatcctgcccactctactattgtagaaccggcaggcactgtg
gaaggaacctcggcagaggccgcgcccgctgaagctgctcggcctccacatgcgggtgcc
cagcccgccagtcatgcccgcaattgggacttcaagccgcctgttggcccggcagaactg
ctcgcccttcctaactctcttgcaaaaccaaagtgcccagaagacggatcaatatctgat
cgacttcgcaagcacccgcttgacggaaagccgccagttggcccggctgaacttgttatg
cttcctaattctaacgcggagctgatgggaccggtgtcacggcgcattggagggcttgcc
gtctctgagtcggaaaccagtgctccagaccaacgcgtgttgcagacagctctagacccg
aatggcgatgcaaaggcttttgatagccagccttctaccaacgggatggttgacggggtt
gtacctaaggcgagtgcctcggttgccagtcaagacgtggacgagatgttcatcaatggc
gccgccgaaaatgagtctgtcgaagaacggagctcgcctccttcgacgctttcagatggg
cccacctcggattcatcagctccaggcttggaaggcgatgtctcacagccccaggagcgc
cgcaagagtgttcgcttctcgcctacggttgagtctgctgcgttcctgcgctctgacccg
ccaagtccgggtcgctcggctgatctttcgtcgaaaagcgtttcttcgtcggcactacct
aacggtggagtggcgactcttgagccggaggtaccctctcctattcctcctgctgccgcg
cctggcacgagtagcaccgccgacgtgtcccgggatacctctaccagtgttgtcaacaga
gaacactttcagctcgcacccgaggaagccttcttcttggccttttccctcggcgccctc
aaagtggtggaccctgtgacaggctctccgatttccaccgagcaccttttacaactcttc
cgggcacactcttacttcccccctcgactggctagttccgacctcagacctgacgacccg
ttcctggtgaactacgccgtgtaccaccacttccgctctctgggttgggttccccgccac
ggcatcaagtttggcgtcgactggatcctctatcagcgcgggcctgtcttcgaccatagc
gagtttggcgtcatggtcatgcctgcgtattcggatccggcttgggagggatatggccac
gaggagccgaagcggtcctggtcgtggttgatgggtgtcaaccgggtcctctcgcacgtg
ctcaagagcctggtgctcgtttatgtggacttgccctcgcccgccgtgtttgagaaggag
atgcagcggggcggcatcgcagccgcgctcaagaaatacaccattcgggaggttatggtt
cggcgtttctctatcaacagaaaccgctga
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