Thermothelomyces thermophilus: MYCTH_2308439
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Entry
MYCTH_2308439 CDS
T02231
Name
(RefSeq) hypothetical protein
KO
K12816
pre-mRNA-processing factor 17
Organism
mtm
Thermothelomyces thermophilus
Pathway
mtm03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mtm00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
MYCTH_2308439
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
mtm03041
]
MYCTH_2308439
Spliceosome [BR:
mtm03041
]
Complex C
Other components
Step II factors
MYCTH_2308439
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
ANAPC4_WD40
NBCH_WD40
Motif
Other DBs
NCBI-GeneID:
11507201
NCBI-ProteinID:
XP_003665095
JGI:
2308439
UniProt:
G2QJU4
LinkDB
All DBs
Position
5:complement(join(1903280..1903658,1903744..1904990))
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AA seq
541 aa
AA seq
DB search
MADSFGDYPPNLTVKDALIVRETEGPSHAVTPYTGTDLARPRLGPANPFRDDGPSASRKR
KNVLTGHAEETFISEHTFRAKHRAVEGDQRHGTLTNREQKEVNKRLRREREDKGDATIAD
GDGAYVGPWARYKRERYEEVEVGEGEEVELASGEEYEIVEEGEEEEDDVVPSGTVVQAPA
PSLARRKEAEEMGVETTTFHGSSEYDYLGRTYMHVPQDLDFSLTKEVGSITNYIPKKMVY
SWKHHGKPITALQLFPRSSHLGLSGAADGSVHIWDVYRDRELLRSFSGHNKAISDLSFNN
DGTKFLSGGFDRKIRLWDTETGQCVNRFNCGKTPHVIKFNPSAENGHEFLAGLSDNRILQ
YDSRAGNETVQEYDHHLGAINTIEFIDESRRFMSTSDDRSLRVWEYGIPVEIKTISEPDM
FALTKSAQHPSGKYVLYQCSDNSIVAYSSGPEKFRQHRRKAWRGHNTAGSAIGLTCSPDG
QFVASGDTGGSVCFWDFKTCRMYSKLTADSAGGAINCVAWSEQETSKVFTAGTKGEIRLW
D
NT seq
1626 nt
NT seq
+upstream
nt +downstream
nt
atggccgactccttcggcgactaccctcccaatctaaccgtcaaggacgccctcatcgtc
cgcgaaacagaaggtccctcacacgccgtcactccgtacacgggcaccgacctcgcgcgc
ccgcggctcggccccgcaaacccattccgcgacgatgggccatcggcctcgagaaagcgc
aagaatgtcctcacgggccacgccgaggagaccttcatctcggagcacaccttccgggcc
aaacaccgggccgtggagggggaccagcggcacggcacgctgacgaaccgcgagcaaaag
gaggtgaacaagcggttgcggcgggagcgggaggacaagggggacgcgacgatcgcggac
ggcgacggggcgtacgtcggaccgtgggcgcggtacaagcgggagcggtacgaggaggtc
gaggtgggcgagggcgaggaggtggagctggccagcggggaggagtacgagatcgtggag
gagggcgaggaagaggaggatgatgtggtgccgagcgggacggtggtgcaggcgcccgcg
ccgtcgctggcgaggcgcaaggaggcggaggagatgggcgtcgagacgacgacattccac
ggctcgagcgagtacgactacctggggaggacgtacatgcacgtgccgcaggacctggac
ttctcgctcacgaaggaggtcgggagcatcaccaactacatcccgaagaagatggtgtac
tcgtggaaacaccacgggaaacccatcactgcgctgcagctcttcccgaggtcgagccat
ttggggttgtcgggcgcagcggatgggtcggtacacatctgggacgtctaccgggacagg
gagctgctgcgctccttctcggggcacaacaaggccatctcggacctgtcgttcaacaac
gacgggaccaagttcctgtctggcgggttcgacaggaagatccggctgtgggacacggag
acggggcagtgcgtcaaccgcttcaactgcggcaagacgccgcacgtcatcaagttcaac
ccctcggcggagaacgggcacgagttcctggccggtctgtccgacaacaggatcctgcag
tacgacagccgggcgggcaacgagacggtccaggagtacgatcaccacctgggcgccatc
aacaccatcgagttcatcgacgagagccgccggttcatgtccacttcggacgaccgctcc
ctcagggtgtgggaatatggcatccccgtcgagatcaaaaccatcagcgaacccgacatg
tttgctctcacaaagtccgcgcagcatcccagcggcaagtacgtgctctatcaatgcagc
gacaactccatcgttgcctactcgtccggtcccgaaaagttccggcaacatcgcaggaag
gcatggcgcgggcacaacaccgccggcagtgccatcggactcacttgcagcccggacggg
caatttgtcgcctcgggcgatacagggggcagcgtgtgcttctgggacttcaagacgtgc
aggatgtacagcaagctcaccgccgacagcgcgggcggggcgatcaactgcgtcgcatgg
tcggagcaggagacaagcaaggtgtttacggcgggaaccaagggcgagatcaggctttgg
gactag
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