Thermothelomyces thermophilus: MYCTH_2308658
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Entry
MYCTH_2308658 CDS
T02231
Name
(RefSeq) hypothetical protein
KO
K12600
superkiller protein 3
Organism
mtm
Thermothelomyces thermophilus
Pathway
mtm03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mtm00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MYCTH_2308658
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mtm03019
]
MYCTH_2308658
Messenger RNA biogenesis [BR:
mtm03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ski complex
MYCTH_2308658
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_19
TPR_16
TPR_2
TPR_14
TPR_22
TPR_8
TPR_1
TPR_CcmH_CycH
TPR_17
TPR_12
TPR_11
TPR_7
ARM_TT21_C
TPR_6
ARM_TT21_N
PPTA
TPR_Slam
TPR_9
ARM_TT21
T7SS_EccA1_N
Gcn1_N
Alkyl_sulf_dimr
DUF3239
E_motif
Motif
Other DBs
NCBI-GeneID:
11510949
NCBI-ProteinID:
XP_003665189
JGI:
2308658
UniProt:
G2QK38
LinkDB
All DBs
Position
5:complement(join(2388331..2392483,2392545..2392663))
Genome browser
AA seq
1423 aa
AA seq
DB search
MSGTKALLKGINEAIKQQKWTEAIEAAEDVLQKDPKNYQAHIFLAFALDKANQFDRSEST
YLTATRLKPNDPQAWQGLIKLYQRQRGKKLKQYQHAALKLAEIFRDANEMYKCQDVVDKF
IDFARTQGERAQYVDALDLILPESPIYPALEGRVPHPAKTYEIQAQIVEADEKKRINTLI
GERRTRIGARVSEVTLEVKREVYSQSKLGYIYGQLINWATDDDVRRTYEEKLIQYCYDRL
LAWPPGEQKEREAAIVQKLANDMVIIRHPFKFAWDITINWQDHKDIRDWDVTVLRQYCTF
FPDSDLNRVIMGFLTSDISPFPKEPAQQPKSSTNAESEDESEDDEGGGAPTTYVPLTDDD
RLLMIMEGVSSADSLFAFRLAGEYYQHIEDHESNVELMRRALDHLKAERSRTGLPFRNTE
DALSLYLGTALIFYQSPRHHQEAKSLFDKVLAHDPSSTGAMIGVGLIYEEEEEYTEAIDF
LERALQRDPGNLRVRTEAAWVKALKGDFETSRNELESCLPLLTKRGQTNKELLAQTQYRI
GYCIWNLDTSRAARKSRSGAYAYFLDCLKNNLNYAPAYTILGKYYADYAKDKKRARRCFQ
KALELSASEVESAERLARSFADDGDWDRVELVAQRVVDSGKVKPPPGSKRKGISWPFAAL
GVAELNKQDYRKAIVSFQAALRISPDDYHSWVGLGESYHGSGRYIAATKAILNAQKLEEA
AGGNIPGETWFSKLILADVNRELGDFDEAITLYRGIIADRPGEAGVAISLMQATVDNALD
SLHKGFFGKSIDLAVETIEFAVQAPQEIKETFNYWKAVGDACSLFSSVQGRLSEFPADTV
QQLLGVDESDILSGDGVGAVVNGTTPDENKIGKELTKVLHATILAHKRAIQVSANDTHAQ
AVAYYNLGWAEHRAHMCLPMRLRKKATKYLKAAIACFKRAIELEAGNSEFWNALGVVTSV
VNPSVSQHSFVRSLHLNESGAHTWTNLGTLALLQGDVQFANDAFTKAQSADPDYAHAWLG
QGLVALLLGDRKEARSLFTHAMDISESSSTASRRHFAISMFDHVMESPSGLPVTSLVQPI
LALSQLQGLDPQEVVYGHLSALFQERNHEHDRTVATLEKICAAVESDYEVTESPESLKRF
AIAKADLARAYLAIGSNEEAIEAAELAVQLSNTDDGDDSSELTAEERKRVRLSAHVTMGL
AKYYQQQGDGVDDAVACFDLAIEESDGNPDVACVLAQVLWATGKEEARERAREVLFEVIE
RSPHHVQSVLLLGVIALLDEDEESLEAVMAELQSLRASDEGVTPADQRQLGEVLRAIAAF
GKGEGQEEEEAKADQARVDVMLHPHLPHGWAELGGAGGEEGKSAAEMAVRVALKGVPPRG
DVAAEDLARAYAGTGRAMDAQRAIVVAPWEKAGWQALGEVVKG
NT seq
4272 nt
NT seq
+upstream
nt +downstream
nt
atgtcaggcaccaaggccctgctgaaggggatcaacgaggcaatcaagcagcaaaaatgg
actgaggctatcgaggctgcagaggatgttctccagaaagaccctaagaactatcaagca
cacatattcctcgctttcgccctggacaaggcaaaccagttcgaccgctcagaaagcaca
tacctcacagcgactaggttaaagcccaatgacccccaagcatggcagggcctcatcaag
ctgtaccagaggcaacgcggaaagaaacttaaacaatatcagcatgctgccctcaagttg
gccgagatcttccgtgacgccaacgagatgtacaagtgccaagacgtcgtcgacaagttt
atcgactttgcgcggacacagggtgagcgggcccagtatgtggacgccttggatctgatt
ctccccgagagccccatctacccagccctggagggccgcgtcccccatccggcaaagaca
tacgagattcaggcccagatcgtcgaggcagacgaaaagaagcggattaacactctgatc
ggcgagcggcgaacccggataggcgcccgagttagcgaggtgacccttgaggtgaaacga
gaggtctacagccagagcaagctgggttacatctatggacaactgatcaactgggccacc
gacgacgatgtgcgccgaacgtacgaggagaagcttattcaatactgctatgataggctt
ctggcgtggcctccgggcgagcaaaaggaacgagaagcggccatagtccagaaacttgca
aatgacatggtcattatcaggcacccgttcaagtttgcctgggacatcaccatcaactgg
caggaccataaggatatacgggactgggacgtcactgtgctgaggcaatactgtaccttc
ttcccggacagtgatctcaatagggtcatcatgggtttcctcaccagcgacatctcgccc
tttcccaaggagccggcgcagcaacccaagtcttctacaaatgcggagagcgaggacgag
agtgaagacgacgaaggaggaggcgcgccgacgacatatgttcccctaaccgatgacgat
cgactgctgatgatcatggagggtgtcagcagcgccgactcgctgttcgcattccggctg
gcgggcgaatactaccagcacatcgaggatcacgagagcaacgtcgagcttatgcgcagg
gctctcgaccatctgaaggcagagcgctccaggactggactgccgttccggaatactgag
gacgccctttcgttgtatcttggcacggcgctgattttctatcagtcgccgcggcaccat
caagaggccaagagcctttttgacaaagtcctggcgcacgacccttcttcaaccggcgcc
atgattggtgtgggcctgatatacgaggaggaagaggagtataccgaggccattgacttc
ttggagcgggcactgcagcgcgacccaggcaaccttcgcgtaaggacggaagctgcctgg
gtcaaagccctgaaaggagacttcgagacaagtaggaatgagctggagagctgtctcccg
cttctcacgaagagagggcagacgaacaaggagctcctcgcgcagacccaataccgcatc
ggatactgtatctggaacctcgacacgtcaagggcggcaaggaagagtcgatcgggggcc
tacgcgtacttcctcgattgtcttaaaaacaatctcaactacgcgcccgcctacacgatc
ctgggcaagtactacgcggattacgcgaaggacaagaagagggcgcgcaggtgcttccaa
aaagcgcttgagctctcagcatccgaggtggaatcggcagagaggcttgcccggtctttc
gcagacgacggcgactgggaccgagtcgagcttgtcgcgcagagagtggttgactcgggg
aaggtcaaacctccgcctgggtcgaagcgcaaaggtatcagctggccctttgccgccctt
ggtgtggcggaactcaacaagcaggattaccgcaaggctatcgtctcattccaggcagca
ctcaggatttcgccggatgactaccactcgtgggtcgggctaggcgagagttatcacggg
tccggacggtacattgcagcgacaaaggctatcttgaacgctcagaagctagaagaggct
gctggtggaaatatccccggggagacgtggttttccaagctcattctggcggacgttaac
cgcgagctgggcgactttgacgaggccatcaccctctaccgtggtataatcgccgaccgt
ccaggcgaagctggcgtggcaatttctctgatgcaggccacggtggacaacgctttggac
agcctgcacaagggcttttttggcaaatcgatcgatcttgccgtggagacaatcgaattc
gcggtgcaggctccacaggagattaaagagacgttcaactactggaaagccgtgggagat
gcctgctcattgttctcgagcgttcagggccgcttgtccgagttccctgccgacacggtc
cagcaattgctcggcgtcgacgagtcggatattctgtcaggagatggtgtcggcgccgtc
gtcaatgggaccacccctgacgagaacaaaatcggaaaggagctgaccaaagtcctgcat
gccaccatactcgcccacaaacgcgccatacaagtgtccgccaacgacacgcacgcgcag
gcagttgcatactacaacctcggctgggctgagcatcgggcccatatgtgtctccccatg
cggctgaggaagaaggcgaccaagtacttgaaagcggcaatcgcgtgcttcaagcgagcc
atcgagctcgaagcgggcaattcggaattctggaacgcccttggcgtcgtaaccagcgtg
gtcaacccatccgtctcgcagcactcgtttgtccgcagcctgcacctgaacgagagcggc
gctcacacgtggacgaacctcggaaccttggcactgctccagggtgacgtccagtttgcg
aacgatgccttcacgaaagcacagtcagcggaccctgactatgcacacgcctggctcgga
cagggcttggtggcgctgctactcggtgaccggaaggaagcgcgcagcctgttcacgcat
gccatggacatctcggagagctcgtccacggcaagcagacggcactttgccatctccatg
tttgaccacgtcatggagtcaccgtccggcttgcccgtgacatcgctcgtccaaccgatc
ctcgccctcagccagctgcaaggcctcgatccacaagaggttgtttacggccacctgtcg
gccctcttccaggagcgcaaccacgagcacgaccggacggttgcgaccctcgaaaagata
tgcgccgccgtcgaatcggattacgaagtcaccgagtcgcccgaatccctcaagcgattt
gccatcgccaaagcagacctcgcccgcgcctacctcgccatcgggtccaacgaggaagcc
atcgaagcggccgagctcgccgtccagctcagcaacaccgacgacggcgacgacagcagc
gagctgacggccgaggagcgcaagcgcgtccggctgagcgcgcacgtgacgatggggctg
gctaagtactaccaacaacagggcgacggcgtcgacgatgcggtggcgtgcttcgacctc
gccatcgaggagtcggacggcaacccggacgtggcgtgcgttctggcgcaggtgctgtgg
gctacgggcaaggaggaggcgcgggagcgggcgcgcgaggtgctgttcgaggtcattgag
cgatcgccgcatcacgtgcagtcggtgctgctcctgggtgtcatcgcgctcctggacgag
gacgaggagagcctcgaggcggtcatggccgagctgcagagcttgagggcgagcgacgag
ggcgtgacgccagcggaccagaggcagctcggggaggtgctgagggctattgcggcgttc
ggcaagggggagggacaggaggaggaggaggccaaggcggaccaggcgagggtggatgtc
atgctacacccgcacttgccgcatgggtgggcggagctcgggggggcgggaggggaggaa
gggaagagcgcggccgagatggcggtgcgggtggcgttgaagggggtgccaccccgagga
gacgtggcggcggaggacctggcaagggcgtatgcggggactggccgggctatggatgcc
caaagggcgattgtggttgcgccatgggagaaggctgggtggcaggcgttgggtgaggtc
gtcaagggatga
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