Medicago truncatula (barrel medic): 11405569
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Entry
11405569 CDS
T01716
Name
(RefSeq) SWI/SNF complex component SNF12 homolog
KO
K11650
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
Organism
mtr
Medicago truncatula (barrel medic)
Pathway
mtr03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
mtr00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
11405569
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mtr03021
]
11405569
03036 Chromosome and associated proteins [BR:
mtr03036
]
11405569
Transcription machinery [BR:
mtr03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
11405569
Chromosome and associated proteins [BR:
mtr03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
11405569
PBAF complex
11405569
GBAF(ncBAF) complex
11405569
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIB
ALMT
Motif
Other DBs
NCBI-GeneID:
11405569
NCBI-ProteinID:
XP_003608843
UniProt:
G7JLF1
LinkDB
All DBs
Position
4:complement(50772221..50776255)
Genome browser
AA seq
528 aa
AA seq
DB search
MNNSNNPPKNPPPAPPSFSSIPVNPQPIHLLTQSHPQMQNPSQFPGHFQLSQPQPQPHVI
SQQQSQFVNPRSHPQTLQQHHQQHQQQQQQQNVASPATASTTSSVKRSHHKANSRPQGSP
SGNQTSAFKTMELTPAPLRKKRTLPENLIPEKVAKIVPESAIYTRLIELEAQIDAALNRK
KVDVQEAVKNPTSVRKTLRVYVYNTFSNQTKESGKVGGVELPSWSLRITGRILEEGGKDP
VVGGISKRGSIVYPKFSAFFKKITVYLDQGFYPDKHVIVWDSARSPVQQDGFEVKRKGDK
EFTAVIRLGVNYSPEKFMVSTPLAKVLGIEFDTRPRIMAALWNYVKFRKLQSPNDPSFFM
CDASLQKVFGEEKMKFSMASQKISQHLSQPQHIHLEHKIKLSGNSPAGTTCYDVQVDVPL
SLEKDMSAFLTSMERHKEIDAFDEVISASVKKIHEHLKRRSFLLGFSQSPAEFINALIAS
QSKDLKLVAGDASHNAENEKRSEFYNKPWVEDAVIRYLSRKSARTDAP
NT seq
1587 nt
NT seq
+upstream
nt +downstream
nt
atgaacaatagcaataatccacccaagaatccaccaccggcgccaccgtcgttttcatcg
attcctgtaaacccacaaccaattcatcttctcactcaatctcaccctcaaatgcaaaat
ccttctcaattccccggtcattttcagctttctcaaccccaaccccaaccccatgtaatt
tcacaacaacaatcacaatttgtaaaccctcgttctcatcctcaaaccctacaacagcac
catcagcaacatcaacagcagcagcagcagcaaaatgtggcttctcctgcaactgcaagt
actacttcatctgtgaagcgttcacatcacaaagcaaattcacgtccacaaggctcacct
agtggtaaccagacatctgcattcaagactatggagttaacacctgctcctttgagaaaa
aagaggactttaccggagaatttaataccggaaaaggtggctaagattgtgcccgagtct
gcgatttatacaaggttaattgagcttgaggcgcagatagatgctgctttgaataggaaa
aaggttgatgtgcaggaggctgttaaaaatccaacttcggttaggaagacgcttagggtt
tatgtgtataatacgttttcgaatcagacgaaggaatctgggaaggttggtggtgttgag
ctgccgtcttggtcgctgaggataactgggaggatattggaagaaggtggtaaggatccc
gtggtgggagggatttcgaaaaggggaagtattgtatatccgaagttttcggctttcttt
aagaagattacggtgtatttggatcaggggttttacccggataagcatgttattgtgtgg
gatagtgctcgttcgcctgtgcagcaagatggttttgaggtgaagaggaaaggggacaaa
gagtttactgcagttattaggttaggagtgaattactcgccggagaagtttatggtttcg
acaccgttggctaaagttttagggattgagtttgatacccgtcctaggataatggctgct
ctttggaactatgtgaagttcaggaagctgcagagtccaaatgacccttcgttcttcatg
tgtgatgcttctctccaaaaagtgttcggggaagaaaagatgaaattctcgatggcttca
cagaagatatcacagcatttatcacaaccacagcatatacacctggagcataaaatcaag
ctttctggaaattctcctgctggaactacatgttatgatgtgcaggttgatgtacctctt
tcgctagagaaagacatgtctgcattcttaacaagtatggagaggcacaaagaaattgat
gcttttgatgaagtgattagcgcttcggtaaagaagatccatgagcatcttaagagacgg
tctttccttcttggctttagtcagtctccagcagagtttattaatgcattgatagcttcg
cagagcaaggatctaaagcttgttgccggagatgccagccataatgccgaaaatgaaaaa
cgttctgaattctacaataaaccatgggttgaggatgctgtaattcgctatctgagccgg
aaaagtgcccgaactgatgctccttga
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