KEGG   Medicago truncatula (barrel medic): 11408397
Entry
11408397          CDS       T01716                                 
Name
(RefSeq) DNA polymerase delta subunit 3 isoform X1
  KO
K03504  DNA polymerase delta subunit 3
Organism
mtr  Medicago truncatula (barrel medic)
Pathway
mtr03030  DNA replication
mtr03410  Base excision repair
mtr03420  Nucleotide excision repair
mtr03430  Mismatch repair
mtr03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:mtr00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    11408397
   03410 Base excision repair
    11408397
   03420 Nucleotide excision repair
    11408397
   03430 Mismatch repair
    11408397
   03440 Homologous recombination
    11408397
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:mtr01009]
    11408397
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:mtr03032]
    11408397
   03400 DNA repair and recombination proteins [BR:mtr03400]
    11408397
Protein phosphatases and associated proteins [BR:mtr01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     11408397
DNA replication proteins [BR:mtr03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   DNA polymerase delta complex
    11408397
DNA repair and recombination proteins [BR:mtr03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     DNA polymerase delta complex
      11408397
   MMR (mismatch excision repair)
    DNA polymerase delta complex
     11408397
SSDB
Motif
Pfam: CDC27 MsyB
Other DBs
NCBI-GeneID: 11408397
NCBI-ProteinID: XP_003596313
UniProt: G7ITE6
LinkDB
Position
2:37736522..37741635
AA seq 527 aa
MSNTETLSLIHEIESLVSDQLQVVSYKWLSRSYQISSNEAKRLLREFVEKHEDGLEVVYA
LSGWLKSSIPSYHVRLVTGTMLAEAQEEFDGKCSVQVYSVQASIPKDAAVLWNAEFIQAE
ELFKQLSKVDNCLGDNRFCGISNSFVQRVKRNVDGQPAVSATPEVKSVVGLGPTKSNVVH
QPPKNIAHNSIAKVDLKTQNVVKDVKSESNGTGNAGVHDNINKPIAEKEKSLPLPAGKKK
GQADKSGSVNGGSLASFWGRPSAKPKPCAVPEENSNMISKPAEVVENGQTCAHEAVLGDS
DDDDNQSVALRRSSNRKRKVVFDFSDEDEDVISLASPEVPSKLSSKDSKQNDKKSLEKVA
LNFDLPVEIKPLVKEERVTEKKVFQPPKDLSVISKCTSTGKSSTEKLQSSAPEICVNKDS
AKKVSPGSPKRRKVMKTRIDERGREVTEVVWEGEETEPKKDDKDTTKKADTVAKKADNIS
TKAVNGAPATKKPPATSNTTGRGGSKKAGNIKDPKQGNILSFFKKKV
NT seq 1584 nt   +upstreamnt  +downstreamnt
atgtcgaacactgaaaccctatccctaattcacgaaatcgaatctctcgtctcagatcaa
cttcaagtggtttcatataaatggctaagtcgcagttatcagatatcatcaaatgaagca
aaaaggttgcttcgggagtttgttgaaaaacatgaggatgggttggaagtggtgtatgct
ttgtctggttggttaaagagtagtattcctagctaccatgtaaggcttgttactgggaca
atgcttgcagaagcacaggaagagtttgatgggaaatgctcagtccaggtatatagtgtg
caagctagtattccaaaggatgcagctgtgctttggaatgcagaattcattcaagcagaa
gagctcttcaagcagctttccaaagttgataattgcttgggagacaataggttctgtggg
atctctaattcttttgtacaaagggtaaaaaggaacgtggatggacaaccggcagtttct
gccactccagaagtaaaatctgtagtaggcttgggaccaacaaagagtaatgttgttcac
caacctcctaaaaacatagcacacaattctattgctaaagttgatctcaaaacacagaat
gtggtgaaagatgtcaagagtgaaagcaatggtacaggaaatgcaggagttcatgataac
atcaataaacctattgcagagaaagaaaagtctcttcccttgcccgcaggcaaaaagaaa
ggacaagctgataaaagtggctctgttaatggaggttcattggcaagcttctggggtcgt
ccatctgcaaaacccaagccttgcgctgtgccagaggaaaatagtaacatgatttcaaaa
cctgcagaagttgttgaaaatggccaaacttgtgctcatgaagcagtactgggtgacagt
gatgacgatgataatcaaagtgtcgccttaagaagatcatccaacaggaaaaggaaggtt
gtctttgatttctcagatgaagatgaagatgtcatcagtttagcatcacctgaggtccct
agtaaactgtcatctaaagattccaaacaaaatgacaaaaagtcattagagaaagttgct
ttgaattttgatttaccggtagaaattaaaccattggttaaggaagaaagagtaactgag
aaaaaagttttccaaccaccaaaagatttatcagttatcagcaagtgcacaagtactggg
aaatcatctactgagaagttgcagagcagtgctccagaaatttgtgtaaataaggatagt
gcaaaaaaggtctctccaggttcacctaagaggagaaaagtgatgaagaccaggattgat
gaacgaggaagagaagtaactgaagtagtctgggagggggaggagacagagccaaagaaa
gatgataaggatacaactaagaaagctgatacggttgcgaagaaagcggacaatatatct
accaaagctgttaacggcgcaccggcaactaagaagccaccagctacatcaaatactact
ggaagaggaggaagcaagaaagcaggaaacataaaggatcccaaacagggcaatattctt
tcatttttcaaaaagaaagtatga

KEGG   Medicago truncatula (barrel medic): 11437014
Entry
11437014          CDS       T01716                                 
Name
(RefSeq) DNA polymerase delta small subunit
  KO
K02328  DNA polymerase delta subunit 2
Organism
mtr  Medicago truncatula (barrel medic)
Pathway
mtr03030  DNA replication
mtr03410  Base excision repair
mtr03420  Nucleotide excision repair
mtr03430  Mismatch repair
mtr03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:mtr00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    11437014
   03410 Base excision repair
    11437014
   03420 Nucleotide excision repair
    11437014
   03430 Mismatch repair
    11437014
   03440 Homologous recombination
    11437014
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:mtr03032]
    11437014
   03400 DNA repair and recombination proteins [BR:mtr03400]
    11437014
DNA replication proteins [BR:mtr03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   DNA polymerase delta complex
    11437014
DNA repair and recombination proteins [BR:mtr03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     DNA polymerase delta complex
      11437014
   MMR (mismatch excision repair)
    DNA polymerase delta complex
     11437014
SSDB
Motif
Pfam: DNA_pol_E_B DNA_pol_D_N
Other DBs
NCBI-GeneID: 11437014
NCBI-ProteinID: XP_003625260
UniProt: G7KVD6
LinkDB
Position
7:43883303..43891154
AA seq 454 aa
MPMEFKRMQCSYESLDESFEIGKEMYRGQQYSQIYFARLHLMRTLLYSLVPHWKPNTPVC
TVLGLEEGKECVIVGTLFKNMKLKPCILDEYSKQRSVPVKSHNFVHEDDYLVLEDESGRV
KLGGSIIVPSVYVTGIVVALHGKETGAGDFLVQEVLEAGLPPQIEFPIKSREDKYVVLVS
GLSVGSSKSNPLQFQLLVDHITGHLGDEKEQSIAAQIVRVVIAGNSVEMPRGLLNGQNLV
SKDLSKMAEPVKELDIMLNQIAAGLPLDIMPGPCDPANFSLPQQALHKCLFPGSSVYNTF
KSCTNPHCFELDGIRFLGTSGQNVDDLEKYSEAKDKLDFMERTLRWRHLAPTAPNTLGCY
PYTDRDPFFIESCPHVYFVGNQDKYDTRVIKGSEGQLVRLVCVPKFSETGVAVMLNLRDL
ECHALSFGTPIIPKKAECDIVEKAECDIVDNTKS
NT seq 1365 nt   +upstreamnt  +downstreamnt
atgccaatggagtttaagagaatgcaatgctcctacgaatccttggacgaatcgttcgaa
atcggtaaagagatgtatcgtggacaacaatacagtcaaatctacttcgcgcgtcttcac
ttgatgcgaactctcttgtattctcttgttcctcattggaaacctaatactcctgtatgc
acggtgttgggattggaagagggcaaggaatgtgttattgttggaacactgtttaaaaat
atgaagttgaagccttgtatacttgatgagtattctaagcagagatcggtgcctgtcaag
tcacataactttgtgcatgaagatgattatcttgttcttgaagatgaaagtggaagagtt
aagcttggtgggagtatcattgtaccatctgtctatgtgacaggaattgtggttgcttta
catggtaaggagacgggagcaggtgattttttggttcaggaagttcttgaagctggctta
ccaccgcagatagaattccccattaaatcaagggaagacaaatatgttgttcttgtctca
ggattaagtgttgggagcagcaagtctaaccctcttcagtttcagcttcttgttgatcat
attactgggcatttaggagatgagaaggagcaaagtattgcggcacaaattgttcgtgta
gtcattgctggaaattctgttgagatgcctcgtggacttcttaatggacagaatttggtc
tcaaaagatctctcgaaaatggcagaacctgtaaaggagctagatattatgttgaatcag
attgctgctggtttgccattggatatcatgccaggaccctgtgaccctgctaatttctca
ttaccacagcaggcgttgcataaatgccttttccctgggtcatccgtctacaacactttc
aaatcttgtacaaatcctcattgttttgagcttgatggtatcaggtttcttgggacatct
ggtcagaatgtagatgatcttgagaagtattcagaggcaaaagataagcttgacttcatg
gaaaggacattacgatggaggcatttggcaccaactgcacctaatacccttgggtgctat
ccttatactgatagggatccattcttcattgaaagctgccctcatgtttactttgttggc
aatcaggataaatatgatactcgcgtgataaagggatcagaaggccaattagttagactc
gtatgtgttcctaaattcagtgaaactggagttgcagttatgttgaatctgagggatctt
gaatgccatgctctcagttttggaactccgattatcccaaagaaggcagagtgtgacatt
gtagagaaggcagagtgtgacattgtagacaacacgaagagctga

KEGG   Medicago truncatula (barrel medic): 25485289
Entry
25485289          CDS       T01716                                 
Name
(RefSeq) DNA polymerase delta subunit 4
  KO
K03505  DNA polymerase delta subunit 4
Organism
mtr  Medicago truncatula (barrel medic)
Pathway
mtr03030  DNA replication
mtr03410  Base excision repair
mtr03420  Nucleotide excision repair
mtr03430  Mismatch repair
mtr03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:mtr00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    25485289
   03410 Base excision repair
    25485289
   03420 Nucleotide excision repair
    25485289
   03430 Mismatch repair
    25485289
   03440 Homologous recombination
    25485289
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:mtr03032]
    25485289
   03400 DNA repair and recombination proteins [BR:mtr03400]
    25485289
DNA replication proteins [BR:mtr03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   DNA polymerase delta complex
    25485289
DNA repair and recombination proteins [BR:mtr03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     DNA polymerase delta complex
      25485289
   MMR (mismatch excision repair)
    DNA polymerase delta complex
     25485289
SSDB
Motif
Pfam: DNA_pol_delta_4
Other DBs
NCBI-GeneID: 25485289
NCBI-ProteinID: XP_013469933
UniProt: G8A0Z6
LinkDB
Position
1:51493914..51494508
AA seq 103 aa
MDEFYKAKKKTLKETSKSKKKKSHVTTKPNDGLEYSKEEMTLREFDMNTAYGPCLGMTRL
ERYERARKWGLKPPPKIGMILKAFNVDKECLLHDRLGFFEKKF
NT seq 312 nt   +upstreamnt  +downstreamnt
atggatgagttctacaaagccaaaaaaaagactttgaaggagacttcaaaatcaaagaag
aagaaatctcatgtaacaactaaacctaacgatggtcttgaatatagcaaggaagagatg
acgttgcgggaatttgacatgaatacggcgtatggaccatgtttaggaatgactagacta
gaacgatatgaacgtgcacgaaaatggggattgaaacctccacccaaaattgggatgatt
ttgaaagcttttaatgttgataaagagtgcttgttgcacgaccgcttagggttctttgaa
aaaaagttctaa

KEGG   Medicago truncatula (barrel medic): 25489857
Entry
25489857          CDS       T01716                                 
Name
(RefSeq) DNA polymerase delta catalytic subunit
  KO
K02327  DNA polymerase delta subunit 1 [EC:2.7.7.7]
Organism
mtr  Medicago truncatula (barrel medic)
Pathway
mtr03030  DNA replication
mtr03410  Base excision repair
mtr03420  Nucleotide excision repair
mtr03430  Mismatch repair
mtr03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:mtr00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    25489857
   03410 Base excision repair
    25489857
   03420 Nucleotide excision repair
    25489857
   03430 Mismatch repair
    25489857
   03440 Homologous recombination
    25489857
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:mtr03032]
    25489857
   03400 DNA repair and recombination proteins [BR:mtr03400]
    25489857
Enzymes [BR:mtr01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     25489857
DNA replication proteins [BR:mtr03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   DNA polymerase delta complex
    25489857
DNA repair and recombination proteins [BR:mtr03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     DNA polymerase delta complex
      25489857
   MMR (mismatch excision repair)
    DNA polymerase delta complex
     25489857
SSDB
Motif
Pfam: DNA_pol_B DNA_pol_B_exo1 zf-C4pol POL3_N DNA_pol_B_2 REV3_N divDNApol
Other DBs
NCBI-GeneID: 25489857
NCBI-ProteinID: XP_013461571
UniProt: A0A072V1N5
LinkDB
Position
3:complement(47595181..47613035)
AA seq 1086 aa
MNKSNSRKRPAAPPSQPPPSKHAASQEEEFMDEDVFLDENLISEDEESAILRDIEQRQAL
ASRLAKWNRPPLSQEYLSQSCSVLFQQLEIDYVIGESRKEFTPKISGPAAIIRIFGVTKE
GHSVCGKVHGFQPYFYINCPPGMRLEDLSSFQKVLEARMREANRNSNVQGNYVRDVVFVQ
KKSIMYYQQTDLHPFIKITVALPTMVASCRGILDRGIQIDGLGMKSFMTYESNVLFALRF
MIDCNIVGGNWIEIPAGKYKKTTKSLSYCQLEFDCLYSDLISHAPEGEYSRMAPFRILSF
DIECAGRKGHFPEPTHDPVIQIANLVTLQGEDQPLIRNVMTLNSCSPIVGVDVMSFDTEG
EVLLAWRDFIREVDPDIIIGYNICKFDLPYLIERAATLKIAEFPILGRIRNSRVRVKDTT
FSSRQYGIRESKEVTVEGRVQFDLLQVMQRDYKLSSYSLNSVSAHFLSEQKEDVHHSIIS
DLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFVYNYVEMARVTGVPISFLLSRGQSIKV
LSQLLRKAKQKNLVIPNAKQAGSEQGTFEGATVLEARAGFYEKPIATLDFASLYPSIMMA
YNLCYCTLVTPENARMLNIPLESMNKTPSGETFVKSNLQKGILPEILEELLAARKRAKAD
LKEAKDPLEKAVLDGRQLALKISANSVYGFTGASIGQLPCLEISSSVTSYGRQMIEHTKK
LVEEKFTRLNGYDNNAEVIYGDTDSVMVQFGVSTVKDAMDLGKEAAEHISGTFTKPIKLE
FEKVYCPYLLISKKRYAGLFWTKEDSHDKMDTKGIETVRRDNCLLVKNLVNDCLHKILIE
KNIPAAVQHVKNAISDLLMNRMDLSLLVITKGLTKTGDDYEVKTAHVELAERMRKRDAAT
APNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENNIPIDPQYYLENQISKPILRIFEPIL
KNASKELLHGSHTRSISISTPSNSGIMKFAKKQYTCIGCKALLSTGISTLCIHCKGREAE
LYCKTVAQVSDLEVLFGRLWTQCQECQGSLHQDVLCTSRDCPIFYRRKKAQKDMAEARLQ
LDRWSF
NT seq 3261 nt   +upstreamnt  +downstreamnt
atgaacaaatccaactcacgcaagcgtccggcggcgcctccgtcacaaccaccaccgtca
aagcatgcagcgtcccaggaagaagagttcatggacgaagacgtcttcctcgacgaaaac
ctaatttccgaagacgaagaatccgcaattctccgtgacatagaacaacgccaagcccta
gcttctcgtcttgctaagtggaatcgtcctcctctctctcaggagtatctctctcaatct
tgtagcgttctttttcagcagttggagattgattatgtgattggagagagtcgcaaagag
tttacaccaaaaatatctggacctgctgctataattcgaatattcggggtaacgaaggaa
ggacacagtgtttgcggcaaggttcacgggtttcaaccatatttctacatcaactgccca
cctggaatgagactagaagatctctccagttttcagaaagtactcgaggcaaggatgaga
gaagccaatagaaacagcaacgtacaaggaaactacgttcgtgatgttgtctttgtgcag
aaaaagagcattatgtactatcagcaaacagatttacatccctttatcaaaattacggtt
gcactcccaacaatggttgctagctgccgtggtattcttgatagaggtattcagattgat
ggtcttggcatgaaaagtttcatgacttatgaaagcaatgtactttttgctcttcgtttc
atgattgattgcaacatagttggtggaaattggattgaaattcctgctggcaaatataaa
aagacaacgaaaagcttgtcttactgccagttagagtttgattgcttgtattccgatttg
attagtcatgctccagaaggggaatattcaaggatggctccgtttcgcattttgagtttt
gacattgaatgtgccggtcgcaaaggtcacttccctgaacctacccatgatcccgtgatt
cagattgctaatctggtaactctacaaggagaggaccagccattaattcgtaacgtgatg
acccttaactcatgttcccctattgttggtgttgatgtgatgtcatttgatacagaagga
gaagtcctgctagcttggagggatttcatccgtgaagtggaccctgatattattattgga
tataacatttgcaaattcgacttgccgtatcttattgagagagctgcgaccctaaagata
gcagaatttccaattctgggccgtatcaggaacagtagagttcgtgtaaaagatacaact
ttttcatcaaggcagtatgggatcagggaaagcaaagaagttaccgtagaagggcgagtc
caatttgatctgctccaggttatgcaaagagactacaagttaagttcgtattcattgaat
tctgtgtcggcacatttcctttccgagcagaaggaggatgttcatcattcaattatatct
gatcttcagaatggaaatgcagaaactagaaggcgccttgctgtgtattgcttgaaggat
gcatacctcccccaacgacttttggataagttgatgttcgtttacaattatgtggaaatg
gctcgtgtaacaggtgtcccaatttcctttctactttccaggggccagagcatcaaggtg
ctttctcaacttcttaggaaggcaaaacaaaagaatctggtcattcctaatgccaagcag
gcaggctcagaacaaggaacatttgaaggtgccactgtattagaggcaagggctggattt
tatgaaaagccaattgctactttggattttgcttccttgtatccgtctattatgatggca
tataatttatgttattgcacactggtgacccctgaaaatgctcgcatgctcaacatcccc
ctggagtcaatgaacaaaacgccatctggtgaaacatttgttaaatcaaatttacagaaa
ggcatacttcctgaaatacttgaagagctattagcagcccgtaaaagggcaaaagcagac
ttaaaggaggcaaaggatccccttgagaaggctgttctagatggcaggcagttggctctg
aagattagtgcaaattctgtatatgggtttacaggggcttctattggtcagttaccttgc
ctagagatatcatcaagtgtaacgagctatggtcgacaaatgattgagcacactaaaaag
cttgtggaagaaaagtttacaagacttaatggatatgacaacaatgctgaggtaatatac
ggagacacagattcagtcatggtacaatttggtgtttctactgtaaaagatgctatggat
ttggggaaagaagctgctgaacatattagcggaactttcacaaaacctatcaaactagaa
tttgagaaggtttactgtccatatctcctgattagcaagaagagatatgctggtttgttt
tggacaaaagaggatagtcatgacaaaatggacactaaaggtattgaaacagttcgaaga
gacaattgcttgttggttaaaaacttggtaaatgactgccttcacaaaatactgattgag
aagaacattcctgcggcagttcagcatgtcaagaatgcaatttcagatcttctcatgaac
cgtatggatttatcacttctggttattacgaagggtttgacaaagacaggagatgactat
gaagtaaagacagctcatgttgaactcgctgaaaggatgcgcaagcgagatgctgctact
gctccaaatgttggagacagagtaccttatgttattattaaagctgccaaaggtgccaag
gcctatgagagatcagaggatcctatctatgtgctagagaacaacatacccatagatcct
cagtactatcttgagaatcaaattagcaagccaattctaagaatttttgagccaattcta
aagaatgctagcaaggaacttctccatggaagccacacaagatctatttctatttctact
ccgtcaaacagcggtataatgaaatttgccaagaagcagtatacttgcattggttgcaaa
gctttacttagtactggaattagcactctctgcatacattgcaaaggaagggaagctgaa
ctgtactgtaaaactgttgctcaagtgtcggatctagaggtactttttgggaggttgtgg
acacagtgtcaggagtgccaaggttcacttcatcaggatgttctctgcacaagtcgagat
tgtccaattttttatcgacgcaaaaaggcacagaaagatatggctgaagcaaggttgcaa
ttggatagatggagcttttga

KEGG   Medicago truncatula (barrel medic): 25493347
Entry
25493347          CDS       T01716                                 
Name
(RefSeq) DNA polymerase delta subunit 4
  KO
K03505  DNA polymerase delta subunit 4
Organism
mtr  Medicago truncatula (barrel medic)
Pathway
mtr03030  DNA replication
mtr03410  Base excision repair
mtr03420  Nucleotide excision repair
mtr03430  Mismatch repair
mtr03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:mtr00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    25493347
   03410 Base excision repair
    25493347
   03420 Nucleotide excision repair
    25493347
   03430 Mismatch repair
    25493347
   03440 Homologous recombination
    25493347
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:mtr03032]
    25493347
   03400 DNA repair and recombination proteins [BR:mtr03400]
    25493347
DNA replication proteins [BR:mtr03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   DNA polymerase delta complex
    25493347
DNA repair and recombination proteins [BR:mtr03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     DNA polymerase delta complex
      25493347
   MMR (mismatch excision repair)
    DNA polymerase delta complex
     25493347
SSDB
Motif
Pfam: DNA_pol_delta_4
Other DBs
NCBI-GeneID: 25493347
NCBI-ProteinID: XP_013457283
UniProt: G8A1C4
LinkDB
Position
4:45932084..45932371
AA seq 95 aa
MSSSGNVKEKESKNMSSSSSVTGNVNGGVTDEQNNSESVLRQFDLNMDYGPSIGLTRLER
WERAKKWDMNPPQEIKELILKSGNDQQEGLWNKRV
NT seq 288 nt   +upstreamnt  +downstreamnt
atgtcttcatctggaaatgtgaaagagaaagagagtaagaatatgtcttcttcttcatca
gttactgggaatgtgaatggtggggttacagatgaacaaaacaacagcgagtcggtgctg
cgacaattcgacctgaacatggattatgggcctagcattgggctgacgaggctggaacga
tgggagcgtgcaaagaagtgggatatgaatcctccgcaggaaattaaggaactgatcttg
aagagtggtaatgatcagcaagaaggcctatggaacaaacgcgtttag

KEGG   Medicago truncatula (barrel medic): 25493349
Entry
25493349          CDS       T01716                                 
Name
(RefSeq) DNA polymerase delta subunit 4
  KO
K03505  DNA polymerase delta subunit 4
Organism
mtr  Medicago truncatula (barrel medic)
Pathway
mtr03030  DNA replication
mtr03410  Base excision repair
mtr03420  Nucleotide excision repair
mtr03430  Mismatch repair
mtr03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:mtr00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    25493349
   03410 Base excision repair
    25493349
   03420 Nucleotide excision repair
    25493349
   03430 Mismatch repair
    25493349
   03440 Homologous recombination
    25493349
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:mtr03032]
    25493349
   03400 DNA repair and recombination proteins [BR:mtr03400]
    25493349
DNA replication proteins [BR:mtr03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   DNA polymerase delta complex
    25493349
DNA repair and recombination proteins [BR:mtr03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     DNA polymerase delta complex
      25493349
   MMR (mismatch excision repair)
    DNA polymerase delta complex
     25493349
SSDB
Motif
Pfam: DNA_pol_delta_4
Other DBs
NCBI-GeneID: 25493349
NCBI-ProteinID: XP_013457285
UniProt: G8A1C1
LinkDB
Position
4:45940166..45940991
AA seq 114 aa
MSSSVSGNMKGFYKQKKNTNLTTTAKSSKSIKPPTHASTSPSLNTNPDLQDEHNGSEAVL
RQFDMNMKYGPCMGMTRLARLERAVKLGLNPPEEIAELLKSGKVQQESLWDTRI
NT seq 345 nt   +upstreamnt  +downstreamnt
atgtcttcatcggtatctgggaatatgaagggcttctacaagcagaagaaaaacaccaat
ctcaccaccaccgccaaatcatccaagtccataaaacctccaactcacgcctccacttca
ccatccctcaacaccaacccagatctccaagatgaacacaacggcagcgaggctgtgctt
cgacaatttgacatgaacatgaagtatgggccttgtatggggatgacgaggctggcacgc
ttggagcgtgctgtgaagcttggtttgaaccctccggaggaaatcgcggaactcttgaag
agtggtaaagttcagcaagaatcactttgggacactcgcatttag

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