KEGG   Medicago truncatula (barrel medic): 11411391
Entry
11411391          CDS       T01716                                 
Name
(RefSeq) exonuclease 1 isoform X1
  KO
K10746  exonuclease 1 [EC:3.1.-.-]
Organism
mtr  Medicago truncatula (barrel medic)
Pathway
mtr03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:mtr00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03430 Mismatch repair
    11411391
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:mtr03032]
    11411391
   03400 DNA repair and recombination proteins [BR:mtr03400]
    11411391
DNA replication proteins [BR:mtr03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    11411391
DNA repair and recombination proteins [BR:mtr03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    Other MMR factors
     11411391
SSDB
Motif
Pfam: XPG_N XPG_I XPG_I_2 MIT TPR_1 TPR_8 TPR_2 Methyltransf_14
Other DBs
NCBI-GeneID: 11411391
NCBI-ProteinID: XP_013446674
UniProt: A0A072TU35
LinkDB
Position
8:complement(40463582..40469284)
AA seq 721 aa
MGIHGLLPLLKSIMIPIHIKDFHGCSVAIDTYSWLHKGALSCSTDLCKGIPTTRHIEYCM
HRVNLLRHYGVKPILVFDGGLLPMKGDQENKRARSRKENLERAVEHEANGNSTAAYECYQ
KAVDISPQIARELIQVLKQENVQYVVAPYEADAQMTFLAISKQVDAVITEDSDLIPFGCP
RIIFKMDKFGQGVQFQYSMLQKNKELNFEGFNKQMLLEMCILSGCDYLQSLPGMGLKKAH
ASIKRFKSYDKVLKHLKYNGVSVPPFYEESFRKAILTFQYQRVYDPVSENIVHLANIPED
IGDELDFLGPPLPKDIGQGIAEGDLDPITKMPFEGDKFAARLEIAGTSQFKTLNSERVKK
RIDLPVQKNLLTKYFCFASLEAKREFKAPRTSPTTANQSTLISSSVNSLEHQTLEAAARE
TVNSGASTVDTENCDSSLPPNSYIENSFPTKTLELMESPNHVSMAGEKKGSPDHTILRQP
RQPIHKPCLGLHKEHELTNVEDKAEEKTKETKRKVIVRSRYFQQKQVEKNACDVKQEQLS
SCIVIDERKNGISGGDLCNKHLKNDDLKKKVYPNDTIQSENLQARKMNPTSSTHDNGCSD
HNVGGPFKENSAQEEKFGTNISHLGHYSQISEKSLERFASVISAYKYTSGSRVSGLRAPL
KDVRNTHNKRPAAVDLSQYAYVPKPTKTRRVAPDVRNTRNIRPKAVDLNQFAYVPKQRLD
E
NT seq 2166 nt   +upstreamnt  +downstreamnt
atgggaatccatggtctgttaccgctactcaaatcaattatgattccaattcacatcaaa
gactttcacggctgttctgtcgccatcgacacttattcctggcttcacaaaggtgccctt
tcttgcagcaccgacctctgtaaaggcatacccactactaggcacattgagtattgtatg
catagagtgaatttgctgagacattatggtgttaagcctattcttgtatttgatggaggg
cttttaccaatgaagggtgatcaagagaacaagcgtgcccggtctagaaaagaaaatttg
gaacgtgcggttgaacatgaagcaaatggaaattctactgctgcctatgagtgctatcag
aaagctgttgatatttcacctcagattgcacgagaacttattcaggtactgaagcaagag
aatgtgcagtatgttgttgccccatatgaggcagatgcccagatgacatttttggcaatt
agcaaacaggttgatgcagttataaccgaagactctgatcttataccatttggttgtcca
aggattatctttaaaatggacaagtttggtcaaggtgttcagtttcagtattccatgcta
caaaagaataaggagcttaattttgaagggttcaacaaacaaatgcttcttgaaatgtgt
attttgagtggctgcgactatcttcagtccttgccaggcatgggtctcaaaaaggctcat
gcaagcattaaaagatttaaaagctatgacaaggttcttaagcacttgaaatacaacggt
gtttctgtacctcccttttacgaagagtcgttcaggaaggctattcttactttccaatat
caacgagtttatgatccagttagtgaaaatattgtccatttggctaatatacctgaggat
attggtgacgagttagactttttaggcccaccattgccaaaagatataggacaaggaata
gcagaaggagatcttgatccaattaccaaaatgccatttgagggagacaaatttgctgcc
agattggaaattgcaggaactagtcaattcaaaacacttaattctgaaagggtgaagaaa
aggattgatctgcctgtgcagaagaatctcttgaccaagtatttttgttttgcatccctt
gaagcaaaaagggaattcaaagcgcctcggacgtcacctaccactgctaatcaaagtaca
ctgatttcctcttctgtcaattccctagaacatcagacattagaagctgctgctagagaa
acagtgaactctggtgcatccactgttgacactgagaattgtgacagcagccttcctcct
aatagctatattgaaaacagttttcccaccaaaactttggagcttatggaatcaccgaat
catgtatctatggcaggagagaagaaaggaagtcctgatcatacaatattgagacagccg
aggcagccaattcataaaccttgtttggggttgcataaggagcatgagctcacaaatgtc
gaagacaaagccgaagagaaaaccaaggagacaaaaagaaaggtaattgtaaggagtcgt
tattttcagcagaaacaagtagaaaagaatgcttgtgacgtgaaacaagagcagctgtcc
tcttgcatcgtcattgatgagagaaaaaatggcatatcaggcggtgatttatgtaacaag
catttgaagaatgatgacctgaaaaagaaggtctaccctaatgacactattcaaagtgaa
aatttgcaggccaggaaaatgaatcctacttcatctactcatgataatggttgctctgat
cacaatgttggcgggccattcaaagagaatagtgctcaagaagaaaaatttggaaccaac
atttcccatttaggccattattcacaaatatctgagaagtctttggaaagatttgcctct
gtaatatcggcttataaatatacctctggctctcgtgtcagcggtcttcgtgctcctctg
aaagatgttcgcaacactcataataagaggcctgcagctgtggacttgagccaatatgca
tacgtgccaaaaccaacaaagactagaagagtagctcctgatgttcgcaacactcgcaat
attaggccaaaagctgtggacttgaaccaatttgcatatgtaccaaaacaaagactagat
gaatag

KEGG   Medicago truncatula (barrel medic): 25480322
Entry
25480322          CDS       T01716                                 
Name
(RefSeq) exonuclease 1
  KO
K10746  exonuclease 1 [EC:3.1.-.-]
Organism
mtr  Medicago truncatula (barrel medic)
Pathway
mtr03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:mtr00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03430 Mismatch repair
    25480322
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:mtr03032]
    25480322
   03400 DNA repair and recombination proteins [BR:mtr03400]
    25480322
DNA replication proteins [BR:mtr03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    25480322
DNA repair and recombination proteins [BR:mtr03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    Other MMR factors
     25480322
SSDB
Motif
Pfam: XPG_N XPG_I 5_3_exonuc XPG_I_2 HHH_5
Other DBs
NCBI-GeneID: 25480322
NCBI-ProteinID: XP_013442684
UniProt: A0A072TGL8
LinkDB
Position
6:37491164..37496439
AA seq 574 aa
MGIKDLLRFMKPYVEPIHIKNYAGKRVGIDAYSWLHKGAYSCSMELCLDSNSERKLRYIE
YFMHRVNLLRYYNVTPVVVFDGGNVPCKAATEKERNKKRNTNRELAMAKLKEGNVNAASE
LFQRAVNITPVMAHKLIQTLKSENIEFVVAPYEADAQLAYLSNLETEKGGIAAVITEDSD
LLTYGCPAVIFKMDREGNGERIELEKVFSAESCKPSFQSFNMKLFTGMCVLAGCDFLPSV
PGIGVARAHALVSKYRNIDRILSVLKLEKGDQMPEDYAKSFKDALAVFEHARIYDINTKE
LKHMKPLPESFLESLDEDLNFLGPEIPSTIVKAIAEGNLNPSTKEAFDKSECSRLPLHPI
DPHTIGQLKKSEVPTIKQDNCFSIFGSQNTNKNCTVTRLSDKDKYSNEVTALQKLIMPLE
TNETMTKPFTFDETHLKVPNNNPFRIRKHEEEISLVQKEETMEEISIVSSGEYIDLNDYM
SPINFQEEGSINLLKKRKFENVCLDKVEVTDEQVSGVTEVENCDGLCLNMESQESVKSKI
RNSSDLKGSGGSEKKSKKKKESNIRTILSFFSKV
NT seq 1725 nt   +upstreamnt  +downstreamnt
atgggaatcaaagatcttctcagattcatgaaaccttacgttgaaccaattcacatcaag
aactacgctggaaaacgtgtgggtattgatgcatattcatggcttcataaaggggcttat
tcatgtagtatggagctttgtcttgattctaatagtgaaaggaaattgcggtatattgaa
tacttcatgcatagagtgaatttgcttcggtactataatgtaacaccagttgttgttttt
gatggcggcaatgttccttgcaaagcagcaactgagaaagagaggaacaaaaaaaggaat
actaatcgtgagttggcaatggctaagctcaaagaagggaatgttaacgctgcatcagaa
ctctttcagagagcagtgaatattactcctgttatggctcataagctaattcagactctg
aaatcagagaacattgagtttgttgtagctccatatgaagcagatgctcagttagcatac
ttgtccaaccttgaaaccgaaaaaggcggcattgcagcagtgattacagaagatagtgat
ctgttaacatatggttgtccagctgttatttttaagatggaccgtgaggggaatggcgaa
agaattgagttagagaaggttttttctgccgaatcttgtaaaccttcgtttcaaagtttc
aatatgaaacttttcacaggtatgtgtgttttagctggctgtgattttcttccatctgtt
cctggcattggtgttgctcgagcgcatgccttagtttcgaagtatcggaatatcgatcgt
atcttgtctgttcttaagcttgagaaaggcgatcaaatgcccgaagattatgccaaatcc
ttcaaggatgcacttgctgtatttgagcatgctcgaatatatgatatcaataccaaagag
ctcaagcacatgaagcctcttccggaaagttttcttgagtcacttgacgaagacctcaat
tttttggggccagaaattccctcaactatagtcaaagcaatagctgaaggaaacttgaat
ccatcaactaaggaagcctttgataaatctgaatgttctagacttcctttacatcccatt
gatccccataccattggtcaactcaagaaaagtgaagttcctacaattaaacaggataat
tgtttttcaatctttggctcccagaataccaataaaaattgtacagtgacaaggctctca
gataaagataagtattccaatgaagtaacggcacttcagaaactaatcatgccattggaa
acaaatgaaacaatgacaaagccatttacatttgatgaaactcatttgaaggttcctaac
aacaatccttttaggataagaaaacacgaggaggaaataagtttggttcagaaagaggaa
acaatggaagagatttctattgtaagcagtggtgaatatattgatcttaatgattacatg
tcaccaattaactttcaagaagaagggtctataaatctcttaaagaaaaggaaatttgag
aatgtttgcttagataaagtagaagtcactgatgaacaggtttcaggagtgactgaagtg
gaaaattgtgatggtttatgcttgaatatggagtcacaagaaagtgtaaagtctaagatt
aggaatagttctgatttgaaaggaagtggtggaagcgaaaagaaatccaagaagaaaaag
gagagtaacatcagaactattttgagtttcttttcaaaagtgtaa

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