Medicago truncatula (barrel medic): 11417956
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Entry
11417956 CDS
T01716
Name
(RefSeq) probable pectate lyase 4
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
mtr
Medicago truncatula (barrel medic)
Pathway
mtr00040
Pentose and glucuronate interconversions
mtr01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
mtr00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
11417956
Enzymes [BR:
mtr01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
11417956
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Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
11417956
NCBI-ProteinID:
XP_003629513
UniProt:
G7LFK2
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Position
8:35858821..35860592
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AA seq
373 aa
AA seq
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MVTFFTTNVSSAKKSEIEGMEMNVIDQCWRFNPEWRKHRQQLANCSVGYAGKMTNNIGKD
LIHYKVTDHSDHPLNPRPGTLRYGASKIQGKVWITFQRDMDIKLVKPLLISSFTTIDGRG
VNVHIADNACLMIYKATNIIIHGIRIHHCQPQAPGMVMGADGKIISLGQVDGDAIRLVSA
SKIWIDHSTLFDCQDGLLDVTRGSTDITISNNWFREQNKVMLLGHDDGFVRDKNMKVTVI
YNYFGPNCHQRMPRIRHGYAHVVNNLYMGWVQYAIGGSMEPSLKSQSNLFIAPATGKKEV
TWRKSSNEIGDTWEFYSVGDAFENGASFVETKGGQVIKPNYNPEQNFKVVDAKFVRSLTR
SSGVLQCSKTSIC
NT seq
1122 nt
NT seq
+upstream
nt +downstream
nt
atggtaacattttttactacaaatgttagttcagcaaagaaatctgagatagaaggaatg
gaaatgaatgtaattgatcaatgttggagatttaatcctgaatggaggaaacatcgacaa
caacttgctaattgctcggtgggatatgcgggaaaaatgacaaacaacattggtaaagac
ttaatccattataaagttaccgatcacagtgaccaccctttaaatccaagacctggaacc
ttgagatatggtgcttctaagattcaaggtaaagtttggatcacattccaaagggatatg
gacattaagcttgtgaaaccccttctcatcagtagtttcaccaccattgatggtcgaggt
gtcaatgtccacattgcagataatgcttgtttgatgatttataaggcaaccaacataatc
atccacggaatcaggattcatcattgtcaacctcaagctcctggaatggtgatgggtgcc
gatggaaagataatatcattaggtcaagtcgatggagatgcaatcagattggtttctgct
tcaaaaatttggattgatcatagcacactttttgattgtcaagatggtcttttagatgtt
acacgaggttccacagatataacaatctccaacaactggtttagagagcaaaataaagtt
atgctacttggtcatgatgatggatttgtgagagacaaaaacatgaaagtcaccgttata
tacaactattttggacctaattgccatcaacgcatgcctagaattcgtcatggatatgca
catgttgtgaataatttgtacatgggatgggtgcaatatgcaataggtggaagtatggaa
ccaagccttaaaagtcaatcaaacctcttcatagcacccgccacagggaaaaaggaggtt
acatggagaaaaagtagcaatgaaattggagatacgtgggaattttattcagttggggac
gcttttgaaaatggagcatccttcgttgaaacaaaaggtggacaagtgataaaaccaaat
tataaccctgaacaaaattttaaagttgttgatgccaaatttgtaagatcattaacaaga
tcatctggggtattgcaatgtagtaaaacatcaatatgttga
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