Medicago truncatula (barrel medic): 11422346
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Entry
11422346 CDS
T01716
Name
(RefSeq) LOW QUALITY PROTEIN: polyubiquitin-like
KO
K08770
ubiquitin C
Organism
mtr
Medicago truncatula (barrel medic)
Pathway
mtr04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
mtr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
11422346
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mtr04121
]
11422346
Ubiquitin system [BR:
mtr04121
]
Ubiquitins and ubiquitin-like proteins
Ubiquitins
11422346
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
ubiquitin
Rad60-SLD
Ubiquitin_2
Rad60-SLD_2
Dsc3_N
TBK1_ULD
DUF2604
Ubiquitin_5
UBL_UBAC1
Motif
Other DBs
NCBI-GeneID:
11422346
NCBI-ProteinID:
XP_024642009
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Position
6:complement(30640444..30641934)
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AA seq
305 aa
AA seq
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MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN
IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI
FAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKA
KIQDKEGXPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKT
ITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR
LRGGF
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
atgcaaatattcgtcaagactcttactggcaagaccatcactctcgaagttgagagttca
gataccatagacaatgttaaggcaaaaattcaagacaaggaaggaatcccacctgaccag
cagcgtctgatttttgctggcaagcagctggaggatgggcgtacccttgctgattacaac
atccaaaaggagtccaccctccatttggtgctccgtctccgtggtgggatgcaaatcttc
gtcaagactctcactggaaagacaatcacccttgaggtggagagctctgatactattgat
aatgtcaaagccaagattcaggacaaggagggtatccccccagaccagcagaggctcatt
tttgctggaaagcagcttgaagatggcagaactcttgccgattacaacatccaaaaagag
tcaactcttcaccttgtcttgcgccttcgtggtggtatgcagatttttgtgaagaccctc
accggaaaaacaattactttggaggtagagagctcagatactattgacaatgtgaaggcc
aagatacaggacaaggagggtnatcccccagaccagcaaaggttgattttcgctggaaag
cagcttgaagatggcaggacattggctgattataatatccagaaggaatccacccttcat
cttgttcttcgtttgaggggaggtatgcagatctttgtgaagactttgacaggaaagacc
attacattggaggtggaaagttcagacaccattgataatgttaaggcaaaaatccaggac
aaggaaggaatcccaccagatcaacagaggttgatctttgctgggaagcaattggaggat
ggaagaacccttgctgactacaacattcagaaagagtctactcttcaccttgttttacgt
cttcgtggtggattctaa
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