Medicago truncatula (barrel medic): 11437185
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Entry
11437185 CDS
T01716
Name
(RefSeq) 2-dehydro-3-deoxyphosphooctonate aldolase
KO
K01627
2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:
2.5.1.55
]
Organism
mtr
Medicago truncatula (barrel medic)
Pathway
mtr00541
Biosynthesis of various nucleotide sugars
mtr01100
Metabolic pathways
mtr01250
Biosynthesis of nucleotide sugars
Brite
KEGG Orthology (KO) [BR:
mtr00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
11437185
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
mtr01005
]
11437185
Enzymes [BR:
mtr01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.55 3-deoxy-8-phosphooctulonate synthase
11437185
Lipopolysaccharide biosynthesis proteins [BR:
mtr01005
]
Lipid A
11437185
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Gene cluster
GFIT
Motif
Pfam:
DAHP_synth_1
DSBA
Motif
Other DBs
NCBI-GeneID:
11437185
NCBI-ProteinID:
XP_013449391
UniProt:
A0A072U120
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Position
7:complement(37745306..37754941)
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AA seq
290 aa
AA seq
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MDPSALLYNQLKAAHPFFLLAGPNVIESEEHIMKMAKHIKAISSKFGIPLVFKSSFDKAN
RTSSKSFRGPGMVEGLKILEKVKVAYDIPIVTDVHEASQCEAVGRVADIIQIPAFLCRQT
DLLVAAAQTGKIINIKKGQFCAPSVMANSAEKVRLAGNPNVMVCERGTMFGYNDLIVDPR
NLEWLREANCPVVADITHSLQQPAGKKLDGGGVASGGLRELIPCIARTSVAVGVDGIFME
VHDDPLSAPVDGPTQWPLRHLEELLEELIAISRVSKGKKPFNIDLTPFRE
NT seq
873 nt
NT seq
+upstream
nt +downstream
nt
atggatccatctgcattgctgtataatcagctcaaggctgcacacccgtttttcctgcta
gctggtcccaatgtgattgaatcagaggagcatataatgaagatggctaagcacatcaag
gctatttcatctaaatttggaattccattggttttcaaatcaagctttgacaaagctaac
cggacatcatcaaaatcattccgtggcccagggatggttgagggattgaagatactcgag
aaggttaaagtagcttatgacattcctatagtgacagatgtgcacgaggccagccagtgt
gaagcagttggcagagttgcagatatcattcaaattccagccttcttatgtcgccaaaca
gatcttctagttgctgcagcccaaactgggaagattatcaacatcaagaagggccagttc
tgtgctccttctgttatggcaaattcggctgaaaaggttcggctagctggaaatcctaat
gtgatggtttgtgagagaggaacaatgtttggctacaatgatttgattgttgatccacgt
aacctggagtggctgagagaagccaattgtcctgttgtagctgatataacgcactcacta
caacaacctgctggaaagaagttggatggaggaggtgttgcaagtggaggtcttcgagag
ctgataccttgcattgcaaggacatcagttgctgtaggagtggacgggatcttcatggag
gtgcacgatgatccactgagcgcacctgtagatggtccaacacagtggcctttgcgccac
ttggaggagctacttgaagagcttatagctatttctagggtaagcaaagggaagaagccg
tttaacattgatctcacaccatttcgtgaataa
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