Medicago truncatula (barrel medic): 11437813
Help
Entry
11437813 CDS
T01716
Name
(RefSeq) cullin-4
KO
K10609
cullin 4
Organism
mtr
Medicago truncatula (barrel medic)
Pathway
mtr03420
Nucleotide excision repair
mtr04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
mtr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
11437813
09124 Replication and repair
03420 Nucleotide excision repair
11437813
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mtr04121
]
11437813
03400 DNA repair and recombination proteins [BR:
mtr03400
]
11437813
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
mtr04147
]
11437813
Ubiquitin system [BR:
mtr04121
]
Ubiquitin ligases (E3)
Multi subunit Ring-finger type E3
Cul4 complex
Cullin
11437813
DNA repair and recombination proteins [BR:
mtr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
11437813
TCR (transcription coupled repair) factors
Cul4-CSA complex
11437813
Exosome [BR:
mtr04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
11437813
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cullin
Cullin_Nedd8
Motif
Other DBs
NCBI-GeneID:
11437813
NCBI-ProteinID:
XP_003593912
UniProt:
G7IP77
LinkDB
All DBs
Position
2:complement(6312800..6327379)
Genome browser
AA seq
792 aa
AA seq
DB search
MSLPTKRSSGATSSSSSPSTSMKKAKSSSTFDDVVFDSSMDDDLKPTDLPRGGAASNMAA
NLARKKATPPQPAKKLLIRLHKGNPTVPSNFEDKTWAILKSAICAIFLKQPDSCDLEKLY
QAVNDLCIHKMGGNLYQRIEKECEVHISAALQSLVGQSPDLIVFLSLVERCWQDLCDQML
MIRGIALFLDRTYVKQSPNIRSIWDMGLQIFRKHLSLSPEVQHKTVTGLLRMIDSERLGE
AVDRTLLNHLLKMFTALGIYAESFEKPFLECTSEFYAAEGVKYMQQSDVPDYLKHVETRL
QEEHERCLIYLDASTKKPLITTTEKQLLERHIPAILDKGFSMLMDGNRIEDLQRMHLLFS
RVNALESLRQAISSYIRRTGQGIVMDEEKDKDMVQSLLEFKAALDTTWEESFAKNEAFSN
TIKDAFEHLINLRQNRPAELIAKFLDDKLRAGNKGTSEEELEGTLDKVLVLFRFIQGKDV
FEAFYKKDLAKRLLLGKSASIDAEKSMISKLKTECGSQFTNKLEGMFKDIELSKEINESF
RQSSQARTKLPSGIEMSVHVLTTGYWPTYPPMDVRLPHELNVYQDIFKEFYLSKYSGRRL
MWQNSLGHCVLKADFPKGKKELAVSLFQTVVLMQFNDAEKLSFQDIKDSTGIEDKELRRT
LQSLACGKVRVLQKMPKGRDVEDYDSFVFNDTFTAPLYRIKVNAIQLKETVEENTNTTER
VFQDRQYQVDAAIVRIMKTRKVLSHTLLITELFQQLKFPIKPADLKKRIESLIDREYLER
DKSNPQVYNYLA
NT seq
2379 nt
NT seq
+upstream
nt +downstream
nt
atgtctctccctacaaaacgttctagcggcgctacttcatcttcatcttctccttcaacc
tctatgaaaaaagctaaatcttcttcaaccttcgacgacgtcgttttcgactcttctatg
gacgacgatctcaaacctaccgaccttcctcgcggcggcgccgcctctaatatggctgct
aatctcgctcgcaaaaaagctactcctcctcaacctgctaagaagcttctcatcaggctc
cacaaaggcaacccaacagtgcccagtaattttgaagacaagacatgggcaattttaaag
tctgctatatgtgctatatttttgaagcaacccgactcctgcgacttggagaagctttat
caggccgtcaatgatctttgcattcataaaatgggtgggaatctttatcaacgaattgaa
aaggagtgtgaagtacacatatctgcagcactgcagtctttggttggacaaagcccggat
ttgattgtatttctatctctagtcgagagatgttggcaggatctctgtgaccaaatgttg
atgattcgtggtatagccttgtttctggataggacatatgtgaaacaatcaccaaatata
cggtcaatatgggacatgggccttcaaattttccgaaaacatctttcactgtctcctgaa
gttcaacacaaaactgttactggtcttttacgaatgattgacagtgaaagattaggtgaa
gcagtggatagaactcttctcaaccatcttttaaagatgtttactgctctgggtatttat
gcagaaagctttgagaagccattccttgaatgtacatctgaattttatgccgctgaaggt
gtgaaatacatgcagcaatcagatgttccagattacttgaagcatgtggagacaagattg
caagaggaacatgaaagatgtttgatctacttggatgcaagtactaagaagccattaata
acaacaacagaaaaacaacttcttgaacgtcatatacctgccattcttgataagggtttc
tctatgcttatggatggaaatcgtattgaagaccttcaaagaatgcacttgctcttttct
agggtcaatgcccttgagtcattgaggcaggccattagttcatacatcaggagaactgga
cagggcattgttatggatgaggagaaagataaagacatggttcaatcccttcttgaattt
aaggctgctcttgacacaacatgggaagaaagctttgcaaagaatgaagcattcagtaac
accattaaagacgcatttgagcatcttatcaatctccgtcagaaccgacctgcagagttg
attgccaagtttttggatgataaacttcgtgcgggtaataagggtacttcagaagaggaa
ttagagggcacgcttgataaagtcctggttttattcaggttcattcagggcaaggatgtg
tttgaggcattttataagaaagatcttgctaaaagattactcttaggaaagagtgcttca
attgacgcggagaaatccatgatctccaagttgaagaccgagtgtggtagccagtttaca
aacaagctggaaggaatgtttaaggacatcgaattatcaaaagaaattaacgaatccttc
agacagtcatcccaggcgagaacaaaactcccatcaggcattgaaatgagcgttcatgtc
ttgacaacagggtactggccaacatatccacccatggatgtcagacttcctcatgaattg
aatgtttaccaggatatttttaaagagttctatctgagcaaatacagtggaaggcgtctc
atgtggcaaaattctttaggtcactgtgtcctaaaggcagattttcccaaagggaaaaag
gagttggctgtctccctatttcagactgttgttttgatgcaattcaatgatgctgagaaa
ctaagctttcaagatatcaaggattctactggtatcgaagacaaggaactgagaaggact
ctgcaatcacttgcatgtggaaaagttcgtgttctacaaaagatgccaaagggtagagat
gtggaagattatgactcgtttgtttttaatgacacatttaccgcccctctctaccgtata
aaggtgaatgcaattcagttgaaggagacagtagaggagaatacaaacaccacagaaaga
gttttccaagatcgtcaatatcaggtcgatgctgctattgtgaggataatgaagactagg
aaagtgcttagtcacactcttcttattactgaactcttccaacagctcaaatttcctatt
aaaccagctgatttgaagaaaaggattgaaagcctgattgacagagaatatctggagagg
gacaagagcaatcctcaagtatacaattacttggcatag
DBGET
integrated database retrieval system