KEGG   Medicago truncatula (barrel medic): 11437813
Entry
11437813          CDS       T01716                                 
Name
(RefSeq) cullin-4
  KO
K10609  cullin 4
Organism
mtr  Medicago truncatula (barrel medic)
Pathway
mtr03420  Nucleotide excision repair
mtr04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:mtr00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    11437813
  09124 Replication and repair
   03420 Nucleotide excision repair
    11437813
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:mtr04121]
    11437813
   03400 DNA repair and recombination proteins [BR:mtr03400]
    11437813
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:mtr04147]
    11437813
Ubiquitin system [BR:mtr04121]
 Ubiquitin ligases (E3)
  Multi subunit Ring-finger type E3
   Cul4 complex
    Cullin
     11437813
DNA repair and recombination proteins [BR:mtr03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Cul4-DDB2 complex
      11437813
    TCR (transcription coupled repair) factors
     Cul4-CSA complex
      11437813
Exosome [BR:mtr04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   11437813
SSDB
Motif
Pfam: Cullin Cullin_Nedd8
Other DBs
NCBI-GeneID: 11437813
NCBI-ProteinID: XP_003593912
UniProt: G7IP77
LinkDB
Position
2:complement(6312800..6327379)
AA seq 792 aa
MSLPTKRSSGATSSSSSPSTSMKKAKSSSTFDDVVFDSSMDDDLKPTDLPRGGAASNMAA
NLARKKATPPQPAKKLLIRLHKGNPTVPSNFEDKTWAILKSAICAIFLKQPDSCDLEKLY
QAVNDLCIHKMGGNLYQRIEKECEVHISAALQSLVGQSPDLIVFLSLVERCWQDLCDQML
MIRGIALFLDRTYVKQSPNIRSIWDMGLQIFRKHLSLSPEVQHKTVTGLLRMIDSERLGE
AVDRTLLNHLLKMFTALGIYAESFEKPFLECTSEFYAAEGVKYMQQSDVPDYLKHVETRL
QEEHERCLIYLDASTKKPLITTTEKQLLERHIPAILDKGFSMLMDGNRIEDLQRMHLLFS
RVNALESLRQAISSYIRRTGQGIVMDEEKDKDMVQSLLEFKAALDTTWEESFAKNEAFSN
TIKDAFEHLINLRQNRPAELIAKFLDDKLRAGNKGTSEEELEGTLDKVLVLFRFIQGKDV
FEAFYKKDLAKRLLLGKSASIDAEKSMISKLKTECGSQFTNKLEGMFKDIELSKEINESF
RQSSQARTKLPSGIEMSVHVLTTGYWPTYPPMDVRLPHELNVYQDIFKEFYLSKYSGRRL
MWQNSLGHCVLKADFPKGKKELAVSLFQTVVLMQFNDAEKLSFQDIKDSTGIEDKELRRT
LQSLACGKVRVLQKMPKGRDVEDYDSFVFNDTFTAPLYRIKVNAIQLKETVEENTNTTER
VFQDRQYQVDAAIVRIMKTRKVLSHTLLITELFQQLKFPIKPADLKKRIESLIDREYLER
DKSNPQVYNYLA
NT seq 2379 nt   +upstreamnt  +downstreamnt
atgtctctccctacaaaacgttctagcggcgctacttcatcttcatcttctccttcaacc
tctatgaaaaaagctaaatcttcttcaaccttcgacgacgtcgttttcgactcttctatg
gacgacgatctcaaacctaccgaccttcctcgcggcggcgccgcctctaatatggctgct
aatctcgctcgcaaaaaagctactcctcctcaacctgctaagaagcttctcatcaggctc
cacaaaggcaacccaacagtgcccagtaattttgaagacaagacatgggcaattttaaag
tctgctatatgtgctatatttttgaagcaacccgactcctgcgacttggagaagctttat
caggccgtcaatgatctttgcattcataaaatgggtgggaatctttatcaacgaattgaa
aaggagtgtgaagtacacatatctgcagcactgcagtctttggttggacaaagcccggat
ttgattgtatttctatctctagtcgagagatgttggcaggatctctgtgaccaaatgttg
atgattcgtggtatagccttgtttctggataggacatatgtgaaacaatcaccaaatata
cggtcaatatgggacatgggccttcaaattttccgaaaacatctttcactgtctcctgaa
gttcaacacaaaactgttactggtcttttacgaatgattgacagtgaaagattaggtgaa
gcagtggatagaactcttctcaaccatcttttaaagatgtttactgctctgggtatttat
gcagaaagctttgagaagccattccttgaatgtacatctgaattttatgccgctgaaggt
gtgaaatacatgcagcaatcagatgttccagattacttgaagcatgtggagacaagattg
caagaggaacatgaaagatgtttgatctacttggatgcaagtactaagaagccattaata
acaacaacagaaaaacaacttcttgaacgtcatatacctgccattcttgataagggtttc
tctatgcttatggatggaaatcgtattgaagaccttcaaagaatgcacttgctcttttct
agggtcaatgcccttgagtcattgaggcaggccattagttcatacatcaggagaactgga
cagggcattgttatggatgaggagaaagataaagacatggttcaatcccttcttgaattt
aaggctgctcttgacacaacatgggaagaaagctttgcaaagaatgaagcattcagtaac
accattaaagacgcatttgagcatcttatcaatctccgtcagaaccgacctgcagagttg
attgccaagtttttggatgataaacttcgtgcgggtaataagggtacttcagaagaggaa
ttagagggcacgcttgataaagtcctggttttattcaggttcattcagggcaaggatgtg
tttgaggcattttataagaaagatcttgctaaaagattactcttaggaaagagtgcttca
attgacgcggagaaatccatgatctccaagttgaagaccgagtgtggtagccagtttaca
aacaagctggaaggaatgtttaaggacatcgaattatcaaaagaaattaacgaatccttc
agacagtcatcccaggcgagaacaaaactcccatcaggcattgaaatgagcgttcatgtc
ttgacaacagggtactggccaacatatccacccatggatgtcagacttcctcatgaattg
aatgtttaccaggatatttttaaagagttctatctgagcaaatacagtggaaggcgtctc
atgtggcaaaattctttaggtcactgtgtcctaaaggcagattttcccaaagggaaaaag
gagttggctgtctccctatttcagactgttgttttgatgcaattcaatgatgctgagaaa
ctaagctttcaagatatcaaggattctactggtatcgaagacaaggaactgagaaggact
ctgcaatcacttgcatgtggaaaagttcgtgttctacaaaagatgccaaagggtagagat
gtggaagattatgactcgtttgtttttaatgacacatttaccgcccctctctaccgtata
aaggtgaatgcaattcagttgaaggagacagtagaggagaatacaaacaccacagaaaga
gttttccaagatcgtcaatatcaggtcgatgctgctattgtgaggataatgaagactagg
aaagtgcttagtcacactcttcttattactgaactcttccaacagctcaaatttcctatt
aaaccagctgatttgaagaaaaggattgaaagcctgattgacagagaatatctggagagg
gacaagagcaatcctcaagtatacaattacttggcatag

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