KEGG   Medicago truncatula (barrel medic): 11438115
Entry
11438115          CDS       T01716                                 
Name
(RefSeq) AP-5 complex subunit beta-1
  KO
K19022  AP-5 complex subunit beta-1
Organism
mtr  Medicago truncatula (barrel medic)
Brite
KEGG Orthology (KO) [BR:mtr00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:mtr03400]
    11438115
DNA repair and recombination proteins [BR:mtr03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    AP-5 complex
     11438115
SSDB
Motif
Pfam: AP5B1_middle AP5B1_C AP5B1_barrel CAS_CSE1 Htt_bridge
Other DBs
NCBI-GeneID: 11438115
NCBI-ProteinID: XP_003607206
UniProt: G7JNG2
LinkDB
Position
4:36341105..36346222
AA seq 1106 aa
MTAPPPSKSLTHHEWETLIENFQSNTATEKWNSLDPPLSDHLLSSLLRKDSPLQLKLQLL
IFLDEFSTSIFPHTHLHRLIEALKTVIQSPPDAVHITPLFKEQFMISVTSVIVCISDSED
EIVQKVTESLVEILLTVINRPNFGSDRHTRAVACECLRELERSKPCLLSDVVGHLWSLCQ
NERTHSSQSYILLFTTVIRNIVDKKLSVSILNTSLPMLPFNTPQCVNREEFGLGLNTKEL
RRALAFLLEWPQVLTPCGMMEFVSMVIPVVVALELQPSMLRVQLFGMIHSYDPLLCHVVL
AMFLRFIDAFDGQEGEVSSRLLLISREAHHYLVFRLLAIHWLLGFNQLVFSKQSRIEKKI
ENGNEVCSNFYPSLFDPLALKALKLDLLASCSVLRLKSDSDDDDSLVDPVKVFEQGLLSV
SSFKWLPPVSTETAIAFRTFHKFLIAGSSHFDSDPSTTRNLLDSMIFRTLQVMLVNMMLE
SRRLVPVVAAFVDRLVSCKKHSWLGERLLQKFDAHLLPKVKMDYKLVYCFPIFHRIAENQ
TIPPHGLLELLTNFMIFLVEKHGPDTVMKSWSQGSRALGICRTMLVHRHSSRLFLRLSRL
LAFTCLYFPDLEVRDNSRTYLRMLVCIPGKKLRDILSLGGTMLGISPSSHQTSFFNVQSP
RPSQRFKTFKNLSSCIHFERLTPLLVKQFWSLSLSSLVVSSSKPAYLEGIRDLEAPIEEK
EFSESSNSQVIPETGRTNQPHEPLRVMDSKVAEILNTLRKYFSCIPDYRYMAGLKVSISC
SLQFESNTFNRMLGISNTATSQEEIDSLPAIYATVLHFSSSAPYGSIPSYHIPFLLGEPP
SKDHASQNDSLSIVPLGKDSGVEKKNRATVVIDLEPREPTPGIVDVNIETNSENGQIIQG
QLQGITAGIEDMFLKTIVPSDIQEDAIPQYNFDLFTALWEACGSSSSTGRETFQLKGGKG
IAAISGTQSVKLLDVPANSLIQATERHLARFVVGVSGESLIDAVWEGGIIQNVIWEDASP
FATPVTNTDTGPLRLTYNNEEYEKGGIINSRQKNLGFFLVLIFLPPRFHLLFQMEVGDVS
TLVRIRTDHWPSLAYIDDYLEALYLS
NT seq 3321 nt   +upstreamnt  +downstreamnt
atgacggcgccaccaccgtcaaagtcactaacccaccacgaatgggaaaccttaatcgaa
aatttccaatccaacaccgccaccgaaaaatggaactctctcgatccacctctctccgat
catctcttatcctcactcctccgcaaagattcccctcttcaactcaaactccaactcctc
atcttcctcgacgaattctccacttccattttccctcacacacacctccaccgtctcatc
gaagctctcaaaaccgttatccaatcaccacccgacgccgttcacatcacaccgctattc
aaagaacagttcatgatttccgtcacttccgttatcgtttgcatctccgattccgaagac
gaaattgttcagaaagtaacggagagtttagttgaaattttgttgacggtgattaaccgt
ccaaacttcggttctgatcgacacacacgcgccgtcgcatgcgagtgtttgagagaattg
gaacgatcgaaaccgtgtttactttccgatgtcgttggacatttgtggagtctttgccag
aatgaacgaacacactcttcacaatcttacattttgcttttcacaacagttattcgtaac
attgttgataagaaactcagtgtttcaattctcaatacatcgcttccgatgcttcctttc
aatacaccgcaatgcgtgaatcgggaggaatttggtttgggtttgaatacgaaggaatta
aggagggcattggcgtttttgttggagtggccacaagtgttgacaccatgtggaatgatg
gagtttgtgtctatggtgatacctgtggtagtggcattggaattgcaaccttcaatgctt
agggttcagttgtttggtatgattcattcttacgatccattactctgccatgttgtttta
gctatgtttttgcgttttattgatgcttttgatggtcaagaaggcgaggtttcgagtaga
ctgttgttgatttcgagagaagctcatcattatttggtgtttcgattgttggcaattcat
tggttgttgggttttaatcaattggtttttagtaaacaatcgcgtattgagaagaagata
gagaatggaaatgaagtatgttctaatttttatccttctttgtttgatcctttggctttg
aaagcgttgaagcttgaccttcttgcttcttgctctgtcttgagactcaaaagtgattct
gatgatgatgatagtttggttgatccggtaaaggtgtttgaacagggtctcctttctgta
tcatcttttaaatggttgcctccagtgagcaccgagactgcaattgcatttcgtactttt
cacaagtttctcattgctggatcgtctcattttgatagtgatccttccaccacaagaaat
ctgttggattcaatgatatttcgtactttgcaggtgatgcttgtcaacatgatgctggag
agtcggagactggttcctgttgttgctgcttttgtggaccgtttagtatcttgtaagaag
cattcttggttgggtgagcgcttacttcagaaatttgatgcgcacttacttccaaaagtt
aaaatggattataagttggtttattgcttcccaatatttcatagaattgctgagaatcag
acaatacctccgcatggattgttagagctactcacgaactttatgatttttcttgtggag
aaacatggtccggatacagtgatgaaatcttggtcccaaggaagtagagctcttggaatt
tgtcgaactatgttggtacatcgccatagttctagattgttccttagactatcccgtcta
cttgctttcacttgtctctattttcctgatttggaagtccgtgataattcaaggacctac
ttgcgtatgctggtctgcattccggggaagaagcttagagatatcttgagcctcggaggc
acgatgcttgggatttcaccttcttcacaccaaacctctttcttcaatgttcagtcaccc
cgaccttctcagagattcaagacatttaaaaacctatcatcctgcattcacttcgagcgt
ctaaccccattgcttgttaagcagttttggtctttgtctttatcaagtttagtcgtgagt
agtagcaaacctgcttatctggagggcatcagggaccttgaagcccctatcgaggaaaag
gaattttctgaaagttccaattcacaggtcattcctgaaactggcagaacaaatcaacca
catgagccactccgtgtcatggactccaaagttgcagaaattttgaacactttaaggaag
tacttttcctgtattcctgactacagatacatggcagggctcaaagttagcatatcatgc
agtttgcaatttgaatctaatactttcaatcgcatgttgggaatcagtaacactgccaca
tcccaggaagagatagattcacttcccgctatatatgctactgtgttacatttttcgtct
tctgcaccttatggatcgattccatcctatcatataccttttcttcttggtgaacctccc
agtaaagatcatgcatctcaaaatgactccctcagtattgttcctcttggaaaggattcc
ggagtagagaaaaagaatagagctactgttgtgattgatttggaacccagggaaccgaca
ccaggtatagttgatgttaacattgaaacaaattcagaaaatggtcagatcatccaaggt
caacttcagggaatcacagcaggcatagaagacatgtttctcaagaccattgttccatca
gacatccaagaagacgcaatacctcagtacaactttgacttgttcactgctttatgggag
gcatgtggctcatcctctagcactgggcgggaaacctttcaattgaaagggggcaaaggg
attgctgccataagcggaacacaatctgtcaagcttcttgacgtccctgcgaactctttg
atccaggcaactgagcgccatctggcacgttttgttgtaggtgtgagtggggagtcactt
attgacgctgtatgggaaggagggattattcagaatgtcatctgggaagatgcttcccct
tttgcaactccagttacaaatactgatacaggaccacttcgtcttacatacaataatgaa
gagtatgaaaagggaggtattatcaatagcaggcaaaaaaatctgggcttttttcttgtt
ctaatattccttccaccacggttccatctccttttccagatggaagttggtgatgtttca
accctagttcgcatacgcacagatcattggcctagcttggcctacattgatgattaccta
gaagctttatatctatcataa

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