Medicago truncatula (barrel medic): 11438115
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Entry
11438115 CDS
T01716
Name
(RefSeq) AP-5 complex subunit beta-1
KO
K19022
AP-5 complex subunit beta-1
Organism
mtr
Medicago truncatula (barrel medic)
Brite
KEGG Orthology (KO) [BR:
mtr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mtr03400
]
11438115
DNA repair and recombination proteins [BR:
mtr03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AP-5 complex
11438115
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Ortholog
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GFIT
Motif
Pfam:
AP5B1_middle
AP5B1_C
AP5B1_barrel
CAS_CSE1
Htt_bridge
Motif
Other DBs
NCBI-GeneID:
11438115
NCBI-ProteinID:
XP_003607206
UniProt:
G7JNG2
LinkDB
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Position
4:36341105..36346222
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AA seq
1106 aa
AA seq
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MTAPPPSKSLTHHEWETLIENFQSNTATEKWNSLDPPLSDHLLSSLLRKDSPLQLKLQLL
IFLDEFSTSIFPHTHLHRLIEALKTVIQSPPDAVHITPLFKEQFMISVTSVIVCISDSED
EIVQKVTESLVEILLTVINRPNFGSDRHTRAVACECLRELERSKPCLLSDVVGHLWSLCQ
NERTHSSQSYILLFTTVIRNIVDKKLSVSILNTSLPMLPFNTPQCVNREEFGLGLNTKEL
RRALAFLLEWPQVLTPCGMMEFVSMVIPVVVALELQPSMLRVQLFGMIHSYDPLLCHVVL
AMFLRFIDAFDGQEGEVSSRLLLISREAHHYLVFRLLAIHWLLGFNQLVFSKQSRIEKKI
ENGNEVCSNFYPSLFDPLALKALKLDLLASCSVLRLKSDSDDDDSLVDPVKVFEQGLLSV
SSFKWLPPVSTETAIAFRTFHKFLIAGSSHFDSDPSTTRNLLDSMIFRTLQVMLVNMMLE
SRRLVPVVAAFVDRLVSCKKHSWLGERLLQKFDAHLLPKVKMDYKLVYCFPIFHRIAENQ
TIPPHGLLELLTNFMIFLVEKHGPDTVMKSWSQGSRALGICRTMLVHRHSSRLFLRLSRL
LAFTCLYFPDLEVRDNSRTYLRMLVCIPGKKLRDILSLGGTMLGISPSSHQTSFFNVQSP
RPSQRFKTFKNLSSCIHFERLTPLLVKQFWSLSLSSLVVSSSKPAYLEGIRDLEAPIEEK
EFSESSNSQVIPETGRTNQPHEPLRVMDSKVAEILNTLRKYFSCIPDYRYMAGLKVSISC
SLQFESNTFNRMLGISNTATSQEEIDSLPAIYATVLHFSSSAPYGSIPSYHIPFLLGEPP
SKDHASQNDSLSIVPLGKDSGVEKKNRATVVIDLEPREPTPGIVDVNIETNSENGQIIQG
QLQGITAGIEDMFLKTIVPSDIQEDAIPQYNFDLFTALWEACGSSSSTGRETFQLKGGKG
IAAISGTQSVKLLDVPANSLIQATERHLARFVVGVSGESLIDAVWEGGIIQNVIWEDASP
FATPVTNTDTGPLRLTYNNEEYEKGGIINSRQKNLGFFLVLIFLPPRFHLLFQMEVGDVS
TLVRIRTDHWPSLAYIDDYLEALYLS
NT seq
3321 nt
NT seq
+upstream
nt +downstream
nt
atgacggcgccaccaccgtcaaagtcactaacccaccacgaatgggaaaccttaatcgaa
aatttccaatccaacaccgccaccgaaaaatggaactctctcgatccacctctctccgat
catctcttatcctcactcctccgcaaagattcccctcttcaactcaaactccaactcctc
atcttcctcgacgaattctccacttccattttccctcacacacacctccaccgtctcatc
gaagctctcaaaaccgttatccaatcaccacccgacgccgttcacatcacaccgctattc
aaagaacagttcatgatttccgtcacttccgttatcgtttgcatctccgattccgaagac
gaaattgttcagaaagtaacggagagtttagttgaaattttgttgacggtgattaaccgt
ccaaacttcggttctgatcgacacacacgcgccgtcgcatgcgagtgtttgagagaattg
gaacgatcgaaaccgtgtttactttccgatgtcgttggacatttgtggagtctttgccag
aatgaacgaacacactcttcacaatcttacattttgcttttcacaacagttattcgtaac
attgttgataagaaactcagtgtttcaattctcaatacatcgcttccgatgcttcctttc
aatacaccgcaatgcgtgaatcgggaggaatttggtttgggtttgaatacgaaggaatta
aggagggcattggcgtttttgttggagtggccacaagtgttgacaccatgtggaatgatg
gagtttgtgtctatggtgatacctgtggtagtggcattggaattgcaaccttcaatgctt
agggttcagttgtttggtatgattcattcttacgatccattactctgccatgttgtttta
gctatgtttttgcgttttattgatgcttttgatggtcaagaaggcgaggtttcgagtaga
ctgttgttgatttcgagagaagctcatcattatttggtgtttcgattgttggcaattcat
tggttgttgggttttaatcaattggtttttagtaaacaatcgcgtattgagaagaagata
gagaatggaaatgaagtatgttctaatttttatccttctttgtttgatcctttggctttg
aaagcgttgaagcttgaccttcttgcttcttgctctgtcttgagactcaaaagtgattct
gatgatgatgatagtttggttgatccggtaaaggtgtttgaacagggtctcctttctgta
tcatcttttaaatggttgcctccagtgagcaccgagactgcaattgcatttcgtactttt
cacaagtttctcattgctggatcgtctcattttgatagtgatccttccaccacaagaaat
ctgttggattcaatgatatttcgtactttgcaggtgatgcttgtcaacatgatgctggag
agtcggagactggttcctgttgttgctgcttttgtggaccgtttagtatcttgtaagaag
cattcttggttgggtgagcgcttacttcagaaatttgatgcgcacttacttccaaaagtt
aaaatggattataagttggtttattgcttcccaatatttcatagaattgctgagaatcag
acaatacctccgcatggattgttagagctactcacgaactttatgatttttcttgtggag
aaacatggtccggatacagtgatgaaatcttggtcccaaggaagtagagctcttggaatt
tgtcgaactatgttggtacatcgccatagttctagattgttccttagactatcccgtcta
cttgctttcacttgtctctattttcctgatttggaagtccgtgataattcaaggacctac
ttgcgtatgctggtctgcattccggggaagaagcttagagatatcttgagcctcggaggc
acgatgcttgggatttcaccttcttcacaccaaacctctttcttcaatgttcagtcaccc
cgaccttctcagagattcaagacatttaaaaacctatcatcctgcattcacttcgagcgt
ctaaccccattgcttgttaagcagttttggtctttgtctttatcaagtttagtcgtgagt
agtagcaaacctgcttatctggagggcatcagggaccttgaagcccctatcgaggaaaag
gaattttctgaaagttccaattcacaggtcattcctgaaactggcagaacaaatcaacca
catgagccactccgtgtcatggactccaaagttgcagaaattttgaacactttaaggaag
tacttttcctgtattcctgactacagatacatggcagggctcaaagttagcatatcatgc
agtttgcaatttgaatctaatactttcaatcgcatgttgggaatcagtaacactgccaca
tcccaggaagagatagattcacttcccgctatatatgctactgtgttacatttttcgtct
tctgcaccttatggatcgattccatcctatcatataccttttcttcttggtgaacctccc
agtaaagatcatgcatctcaaaatgactccctcagtattgttcctcttggaaaggattcc
ggagtagagaaaaagaatagagctactgttgtgattgatttggaacccagggaaccgaca
ccaggtatagttgatgttaacattgaaacaaattcagaaaatggtcagatcatccaaggt
caacttcagggaatcacagcaggcatagaagacatgtttctcaagaccattgttccatca
gacatccaagaagacgcaatacctcagtacaactttgacttgttcactgctttatgggag
gcatgtggctcatcctctagcactgggcgggaaacctttcaattgaaagggggcaaaggg
attgctgccataagcggaacacaatctgtcaagcttcttgacgtccctgcgaactctttg
atccaggcaactgagcgccatctggcacgttttgttgtaggtgtgagtggggagtcactt
attgacgctgtatgggaaggagggattattcagaatgtcatctgggaagatgcttcccct
tttgcaactccagttacaaatactgatacaggaccacttcgtcttacatacaataatgaa
gagtatgaaaagggaggtattatcaatagcaggcaaaaaaatctgggcttttttcttgtt
ctaatattccttccaccacggttccatctccttttccagatggaagttggtgatgtttca
accctagttcgcatacgcacagatcattggcctagcttggcctacattgatgattaccta
gaagctttatatctatcataa
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