Medicago truncatula (barrel medic): 11439569
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Entry
11439569 CDS
T01716
Name
(RefSeq) putative pectate lyase 2 isoform X2
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
mtr
Medicago truncatula (barrel medic)
Pathway
mtr00040
Pentose and glucuronate interconversions
mtr01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
mtr00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
11439569
Enzymes [BR:
mtr01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
11439569
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Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
11439569
NCBI-ProteinID:
XP_003610466
UniProt:
G7KK58
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Position
4:complement(63549461..63551252)
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AA seq
385 aa
AA seq
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MAISTSLLLLSCFLLPIVLSFVNAYSKENYYNTNKPYLNKIDSCWRAKPNWALNRKALAD
CAIGFGKDSIGGKYGAIYIVTDSSDDPANPKPGTLRYGAIQTKPLWIIFERNMVLTLKNE
LIMNSYKTIDGRGVKVEIGNGPCITIQGVSHVIIHGISIHDCKPSKAGLVRSTPDHVGRR
RGADGDAISIFASSNIWIDHCFLARSTDGLIDIIHASTAITISNNYFTQHDKVMLLGHND
EYTADKIMKVTIVFNRFGSGLIERMPRVRFGYAHVVNNKYDQWQMYAIGGSANPTILSEG
NFYNAPNDHTKKQITKRESKGNWKSWKWRSSKDYFSNGAYFIPSGYGSCAPNYTPAQSFV
AVPGYMVPAITLNAGPLSCFVGRSC
NT seq
1158 nt
NT seq
+upstream
nt +downstream
nt
atggccatttcaacttcactcctcttactttcatgcttcttactaccaattgttctaagc
tttgttaatgcctattccaaagagaactactataacactaacaaaccatacctcaacaag
atagattcttgttggcgcgccaaaccgaattgggcgttgaatcgaaaagccttagctgat
tgtgctattggttttggcaaagattcaattggaggcaaatatggtgcaatatatattgtt
acagattcctccgatgaccctgcaaatccaaaaccaggtacacttcgttatggcgcgata
caaacgaagccgctttggatcattttcgaaaggaacatggttcttactctaaagaatgaa
cttattatgaatagttacaagactattgatggtagaggagttaaagttgagattggaaat
ggaccttgtattacaatacaaggtgttagtcatgttattatacatggaattagcattcat
gattgtaaaccaagtaaagctggacttgttagaagtactcctgatcatgtcggccgtcgt
cgaggtgccgatggcgatgctattagtatatttgcttcctcaaatatttggattgatcat
tgctttttggctcgttcaactgatggactaattgatattattcatgcctcaactgctatt
accatttctaacaattacttcacccagcatgacaaagttatgttgctaggacacaatgat
gaatacactgcagataagataatgaaagtaacaatagtcttcaatcggtttggcagtggg
ctaattgaaaggatgccaagggtaagatttggttatgctcatgtggtgaacaacaaatat
gatcagtggcaaatgtatgctataggaggaagtgctaacccaaccattttaagtgaaggc
aacttttataatgcaccaaatgaccatactaaaaaacagattaccaagagggaatcaaag
ggaaattggaagagttggaaatggagatcttcaaaggattatttttcaaatggtgcttat
tttataccatctggatatggaagttgtgcaccaaattatacacctgctcaatcttttgtg
gctgttccaggttatatggtacctgctataactctcaatgcaggtccattgagttgtttt
gttgggaggtcatgttaa
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