KEGG   Medicago truncatula (barrel medic): 25482432
Entry
25482432          CDS       T01716                                 
Name
(RefSeq) F-box protein SKP2A
  KO
K03875  F-box and leucine-rich repeat protein 1 (S-phase kinase-associated protein 2)
Organism
mtr  Medicago truncatula (barrel medic)
Pathway
mtr04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:mtr00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    25482432
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:mtr04121]
    25482432
Ubiquitin system [BR:mtr04121]
 Ubiquitin ligases (E3)
  Multi subunit Ring-finger type E3
   SCF complex
    Target recognizing subunit (F-box)
     25482432
SSDB
Motif
Pfam: LRR_6 LRR_4 LRR_At5g56370 F-box-like F-box LRR_At1g61320_AtMIF1 F-box_4 PRANC
Other DBs
NCBI-GeneID: 25482432
NCBI-ProteinID: XP_013466439
UniProt: A0A072VQT2
LinkDB
Position
1:complement(10198125..10200671)
AA seq 353 aa
MMITTTSCGGSENFVKEVKMMMTVREWKDIPVELLMQILSLLDDQMVITASHVCHGWRDS
ISFALTRLSLSWCRKNMNNLVLSLAPKFTKLQTLILRQDTPQLEDNAVEAVAQFCRDLQI
LDLSKSFKLTDRSLYAIALGCSDLTKLNISGCSSFSDKALSYLASLCRKLKILNLCGCVK
AVSDTALQAIGHHCNQLQSLNLGWCEQVSDVGVMSLAYGCPDLRTLDLCGCVLITDDSVI
ALADRCPHLKSLGLYYCKNITDRAMYSLAQSKVNNKMWGSVNEEDGLKTLNISQCTSLTP
SAVQAVCDSSPALHTCSGRHSLIISGCLNLTSVHCACCVRPHRAINAFPHSAH
NT seq 1062 nt   +upstreamnt  +downstreamnt
atgatgattactactactagctgtggcggtagtgaaaattttgtgaaagaagtgaagatg
atgatgacagtgagagagtggaaggatattccagttgaacttttgatgcaaattttgtca
cttttggatgatcaaatggtgattacagcttctcatgtttgtcatggttggagagattcc
atttcttttgctctcactcgtttatcactctcatggtgtaggaagaacatgaataacttg
gtcctatctcttgctcctaagttcacaaaattgcaaactctaatccttcgtcaagacacg
ccacaactagaagacaatgctgtcgaggctgttgcacaattctgtcgtgacctgcagatc
ctggacctcagcaaaagtttcaaacttaccgatcgttctctgtatgcaatagcccttggt
tgttctgatcttacaaaactcaacataagtggttgttcatcctttagcgacaaagctctt
tcttacctagcaagtttatgcagaaagctgaaaattttgaatctatgtggttgtgttaaa
gctgtatcagatactgcattacaggcaattggacatcactgcaatcagttacagtctttg
aatcttggatggtgcgaacaagtcagcgatgttggagtgatgagtttagcatatggatgt
cctgatcttagaacacttgacttatgtggttgtgtccttataacagatgacagtgtaatt
gccttggcggataggtgtcctcatctaaagtcccttggactgtactactgcaaaaacata
acagacagagcaatgtactcattggcacaaagcaaagtgaataataagatgtggggatct
gtgaacgaagaggatggacttaagactttgaacattagccagtgtacatcgctcactcca
tctgctgttcaggctgtctgtgactcatcccctgcacttcacacctgctcaggaagacat
tcactcattatcagtggctgtcttaatcttacatctgtgcattgtgcttgttgtgtccgg
ccacaccgagctataaacgcttttcctcactcagctcattga

KEGG   Medicago truncatula (barrel medic): 25489745
Entry
25489745          CDS       T01716                                 
Name
(RefSeq) F-box protein SKP2A
  KO
K03875  F-box and leucine-rich repeat protein 1 (S-phase kinase-associated protein 2)
Organism
mtr  Medicago truncatula (barrel medic)
Pathway
mtr04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:mtr00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    25489745
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:mtr04121]
    25489745
Ubiquitin system [BR:mtr04121]
 Ubiquitin ligases (E3)
  Multi subunit Ring-finger type E3
   SCF complex
    Target recognizing subunit (F-box)
     25489745
SSDB
Motif
Pfam: LRR_6 LRR_4 F-box-like LRR_At5g56370 F-box zf-H3C2 F-box_4
Other DBs
NCBI-GeneID: 25489745
NCBI-ProteinID: XP_013461356
UniProt: B7FJG1
LinkDB
Position
3:44149142..44152577
AA seq 368 aa
MVGKDNLKTEDLNLFFENLMMVAGGEKGGNMKVGVITEWKDIPVELLMQILSLVDDQTVI
RVSGVCRGWRDSIYFGLARLSLSWCNKNMNNLVLSLVPKFAKLQTLILRQDKPQLDDNVV
GTIANFCHDLQILDLSKSFKLTDRSLYAIAHGCRDLTKLNISGCSAFSDNALAYLAGFCR
KLKVLNLCGCVRAASDTALQAIGHYCNQLQSLNLGWCDKVGDVGVMSLAYGCPDLRTVDL
CGCVYITDDSVIALANGCPHLRSLGLYFCKNITDNAMYSLAQSKVKNRMWGSVKGGNDED
GLRTLNISQCTSLTPSAVQAVCDSSPALHTCSGRHSLIMSGCLNLTEVHCACAGHAHRAM
NAFPHPAH
NT seq 1107 nt   +upstreamnt  +downstreamnt
atggttgggaaggataatttaaagactgaggatttgaatttgttttttgagaatcttatg
atggttgctggtggtgagaaaggagggaacatgaaggttggtgtgatcactgaatggaag
gatattcctgttgagcttttgatgcagattctgtctcttgtggatgatcagactgtgatt
cgagtttctggtgtttgtcgtggttggagagattctatttactttggccttgctcgttta
tcactctcttggtgtaacaagaacatgaacaacttggtcctatctcttgttcccaagttt
gcaaaactgcaaactctaatccttcgtcaagataagccacaactggacgacaatgttgtt
ggcactattgcaaatttctgtcatgacctgcagattcttgacctcagcaaaagtttcaag
ctcactgatcgctcactgtacgctatcgctcatggttgccgcgatcttacaaaactaaat
atcagtggatgttcagcatttagtgacaatgctctggcctaccttgctggtttctgtaga
aaactgaaagttctaaatctctgtggatgtgttagagcagcttctgatactgcacttcag
gctattggacactactgcaatcagttgcagtctttgaaccttggatggtgtgacaaagtt
ggtgatgttggagtgatgagtctagcatatggttgtcctgatctaaggacagttgatttg
tgtggctgtgtctatataacagatgatagtgtgattgctttggcaaacggatgccctcac
ctgaggtcccttggactgtacttctgcaagaacataacagacaatgcaatgtattcattg
gcacaaagcaaagtgaagaacaggatgtggggatctgtgaaaggaggaaatgatgaagat
ggactaaggacattgaacatcagccagtgcacttcactcactccttcagctgttcaggcg
gtttgtgactcatctcctgctctccacacatgctcagggaggcattcactcatcatgagt
ggctgtctcaatttgaccgaagtccattgtgcgtgtgctggtcatgcacaccgtgcaatg
aacgctttcccccatcctgctcattaa

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