Medicago truncatula (barrel medic): 25484600
Help
Entry
25484600 CDS
T01716
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 2
KO
K05610
ubiquitin carboxyl-terminal hydrolase L5 [EC:
3.4.19.12
]
Organism
mtr
Medicago truncatula (barrel medic)
Pathway
mtr03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
mtr00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
25484600
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
mtr01002
]
25484600
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mtr04121
]
25484600
Enzymes [BR:
mtr01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
25484600
Peptidases and inhibitors [BR:
mtr01002
]
Cysteine peptidases
Family C12: ubiquitin C-terminal hydrolase family
25484600
Ubiquitin system [BR:
mtr04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UCH
25484600
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Peptidase_C12
UCH_C
DUF1574
Motif
Other DBs
NCBI-GeneID:
25484600
NCBI-ProteinID:
XP_013468913
UniProt:
A0A072VY12
LinkDB
All DBs
Position
1:38934267..38938748
Genome browser
AA seq
334 aa
AA seq
DB search
MSWCTIESDPGVFTELIQQMQVKGVQVEELYSLDPDALNSLRPVYGLIFLFKWRPGEKDE
RAVIKDPNPNLFFASQVINNACATQAILSILLNSPDVDIGPELTKLKEFTKNFPPELKGL
AINNSDPIRAAHNSFARPEPFVPEEQKAATKDDDVYHFISYLPVDGVLYELDGLKEGPIS
LGQCAGGQGDMEWLKMVQPVIQERIERYSQNEIRFNLLAIVKNRKEVYTSELKELQKRRE
RILQQLSASKAERLVDNSSSDVLNNSLSEVNAGIEAATEKILLEEEKFKKWRTENIRRKH
NYIPFLFNFLKLLAEKKQLKPLIEKAKQKTSSSR
NT seq
1005 nt
NT seq
+upstream
nt +downstream
nt
atgtcttggtgcaccattgaatccgatcccggtgtttttactgaacttattcagcaaatg
caagtgaaaggggttcaggtagaggaactgtattcattggaccctgacgctctcaatagc
cttaggcctgtatacggattgatttttcttttcaaatggcgcccaggagaaaaggatgaa
cgtgctgtaatcaaagatcccaaccctaacttattttttgctagccaggtaattaataat
gcttgtgcaacccaggcaatcttgtctattcttcttaattcaccggatgttgacattggt
ccagagttgacaaaactgaaagaatttaccaagaactttcctcctgagctcaaaggtttg
gctatcaataacagtgaccccatacgtgcagcccataatagctttgcaagaccagaacct
tttgtccctgaagagcaaaaggctgctaccaaagatgatgatgtttaccactttataagc
tatctacctgttgatggagtattgtatgagcttgatggattgaaggagggtcctatcagc
cttggccagtgtgctggtgggcaaggtgatatggaatggctgaagatggtgcaacctgtg
atccaggaacgcatcgaaaggtattcacaaaatgagataaggtttaatctccttgcaatc
gttaagaacaggaaagaggtgtatacttccgagctgaaggaacttcaaaagagaagggag
aggattttgcagcagctgtctgcatcgaaggcagagagactggtagacaatagcagttct
gatgtacttaacaattctctctctgaagtgaatgctgggattgaagctgctactgagaag
atcttattggaggaagaaaaattcaaaaaatggaggacagaaaatattcgtaggaaacac
aattacataccctttttgtttaactttcttaagcttcttgctgagaagaagcagttgaaa
cccctcattgagaaggccaagcagaaaacaagcagttctcggtga
DBGET
integrated database retrieval system
