Micromonospora tulbaghiae: CSH63_29800
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Entry
CSH63_29800 CDS
T05651
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
mtua
Micromonospora tulbaghiae
Pathway
mtua03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
mtua00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
CSH63_29800
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mtua03021
]
CSH63_29800
03400 DNA repair and recombination proteins [BR:
mtua03400
]
CSH63_29800
Enzymes [BR:
mtua01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
CSH63_29800
Transcription machinery [BR:
mtua03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
CSH63_29800
DNA repair and recombination proteins [BR:
mtua03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
CSH63_29800
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_2
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpb2_45
RNA_pol_Rpb2_1
Motif
Other DBs
NCBI-ProteinID:
AYF31567
UniProt:
A0A386WT19
LinkDB
All DBs
Position
6372466..6375897
Genome browser
AA seq
1143 aa
AA seq
DB search
MAASRPAKTSRTSSAFAPRRVSFGRITEHLEVPNLLAIQNESFDWLVGNEAWQGRSADDP
HARSGLAEILDEISPIEDFSGTMSLSFSAPRFDEVKASIEECKEKDLTYCAPLFVTAEFT
NNTTGEIKSQTVFMGDFPMMTPKGTFIINGTERVVVSQLVRSPGVYFDKQPDKTSDRDLS
SVKVIPSRGAWLEFDIDKRDTVGVRIDRKRRQAVTVLLKAIGWSAERIREKFGWSELMMT
TLEKDHIAGQDEALLDIYRKLRPGEPPTRENAQTLLDNLFFNPKRYDVAKVGRYKFNKKL
ELDVPITTGTLTEDDIVATVEYLCRLHAGEEGYEADDIDHFGNRRLRTVGELIQNQVRVG
LSRMERVVRERMTTQDVEAITPQTLINIRPVVAAIKEFFGTSQLSQFMDQTNPLAGLTHR
RRLSALGPGGLSRERAGFEVRDVHPSHYGRMCPIETPEGPNIGLIGALSTFARVNPFGFI
ETPYRKVIDGRVTDQIDYLTADEEDRFVKAQANAPLKSDGTFAEDRVLVRRKGGETEDVA
PGAVDYMDVSPRQMTSVATAMIPFLEHDDANRALMGANMQRQAVPLVKAEAPLVGTGMEY
RAAVDAGDVVVAEVGGVVEDLCADYITVHQDDGHRRTYLLHKFRRSNAGSCVNQKPVVFE
GDRVEAGQVIADGPCTDEGEMALGRNLLVAFMCWEGHNYEDAIILSQRLVQQDVLTSIHI
EEHEVDARDTKLGPEEITRDIPNVSEEMLADLDERGIIRIGAEVVPGDILVGKVTPKGET
ELTPEERLLRAIFGEKAREVRDTSLKVPHGETGTVIGVRTFSREDGDELPPGVNELVRVY
VAQKRKIQDGDKLAGRHGNKGVISKILPIEDMPFLEDGTPVDIVLNPLGVPSRMNIGQVL
ETHLGWVAKTGWSVDGDDEEWKRQLRSIEAHESEPDTNVATPVFDGAREEEISGLLASTL
PNRDGKQLIGRTGKAQLFDGRSGEPLPDPIAVGYVYILKLNHLVDDKIHARSTGPYSMIT
QQPLGGKAQFGGQRFGEMECWAMQAYGAAYALQELLTIKSDDVLGRVKVYEAIVKGENIP
EPGIPESFKVLLKELQSLCLNVEVLSSDGVALEMRETDDEVFRAAEELGIDLSRREPSSV
EEV
NT seq
3432 nt
NT seq
+upstream
nt +downstream
nt
ttggcagcttcccgccctgcgaagaccagtcgtacgtcgagcgcattcgcgccccgccga
gtttctttcggtcggatcaccgaacacctcgaggtccccaacctcctcgccattcagaac
gagtccttcgactggctcgtcggcaacgaggcttggcagggccggtcggcggacgacccg
cacgcacgctcgggtctcgcggagatcctcgacgagatcagtcccattgaggacttctcc
ggcaccatgtcgctctccttctcggctccgcgcttcgacgaggtcaaggcctcgatcgag
gagtgcaaggagaaggacctgacctactgcgcgccgctgttcgtgaccgcggagttcacc
aacaacaccactggcgagatcaagagccagacggtgttcatgggtgacttcccgatgatg
acgccgaagggcaccttcatcatcaacggcaccgagcgcgtcgtggtcagccagctcgtc
cgctcgccgggcgtgtacttcgacaagcagccggacaagacctccgaccgcgacctctcc
agcgtcaaggtcatcccgagccggggtgcctggctggagttcgacatcgacaagcgcgac
acggtcggcgttcgcatcgaccgcaagcgccgccaggccgtcaccgtcctgctcaaggcc
atcgggtggtccgccgagcgcatccgtgagaagttcggctggtccgagctcatgatgacc
acgctcgagaaggaccacatcgccggccaggacgaggccctgctcgacatctaccggaag
ctccgccctggcgagccgccgacccgtgagaacgcccagaccctgctcgacaacctcttc
ttcaacccgaagcggtacgacgtcgccaaggtcgggcgctacaagttcaacaagaagctc
gagctggacgtgccgatcaccaccggcacgctcaccgaggacgacatcgtcgccaccgtg
gagtacctctgccggctgcacgccggtgaggagggctacgaggccgacgacatcgaccac
ttcggcaaccgtcgcctgcgtaccgtgggtgagctgatccagaaccaggtccgggtgggt
ctctcccggatggagcgggtcgtccgcgagcggatgaccacccaggacgtcgaggcgatc
acgccgcagaccctgatcaacatccgcccggtggtggcggcgatcaaggagttcttcggt
acgtcgcagctgtcccagttcatggaccagaccaacccgctggcgggcctgacccaccgg
cgccggctgagcgcgctcggcccgggtggtctgtcccgcgagcgggccggcttcgaggtc
cgggacgtgcacccgtcccactacggccggatgtgcccgatcgagacgccggaaggcccg
aacatcggcctgatcggcgcgctgtccacgttcgcccgggtcaacccgttcggcttcatc
gagacgccgtaccggaaggtcatcgacggccgggtcaccgaccagatcgactacctgacc
gcggacgaggaggaccggttcgtcaaggcgcaggccaacgccccgctgaagtcggacggc
accttcgccgaggaccgcgtcctggtccgccgtaagggcggcgagaccgaggacgtcgcg
ccgggcgccgtggactacatggacgtgtcgccgcggcagatgacctcggtcgccaccgcg
atgatcccgttcctggagcacgacgacgcgaaccgcgcgctcatgggcgcgaacatgcag
cgtcaggcggtgccgctggtcaaggccgaggccccgctggtcggtacgggcatggagtac
cgcgcggccgtggacgccggcgacgtggtcgtggccgaggtcggcggtgtggtcgaggac
ctctgcgcggactacatcacggtccaccaggacgacggtcaccgccggacgtacctgctg
cacaagttccgccgctccaacgccggctcctgcgtcaaccagaagccggtcgtcttcgag
ggcgaccgcgtcgaggccggccaggtcatcgccgacggtccgtgcaccgacgagggcgag
atggcgctcggacgcaacctgctggtggcgttcatgtgctgggagggccacaactacgag
gacgcgatcatcctgtcgcagcgcctcgtgcagcaggacgtgctcacctcgatccacatc
gaggagcacgaggtcgacgcccgggacaccaagctgggcccggaggagatcacccgcgac
atcccgaacgtcagcgaggagatgctcgccgacctcgacgagcgcggcatcatccggatc
ggcgccgaggtcgtccccggcgacatcctggtcgggaaggtcacgccgaagggcgagacc
gagctgacccccgaggagcggctgctccgcgcgatcttcggtgagaaggcgcgcgaggtc
cgtgacacctcgctgaaggtgccgcacggcgagaccggcacggtcatcggtgtgcgtacc
ttctcccgcgaggacggcgacgagctgcccccgggcgtcaacgagctggtgcgggtctac
gtggcccagaagcgcaagatccaggacggtgacaagctcgcgggccgccacggcaacaag
ggcgtcatctccaagatcctgccgatcgaggacatgccgttcctggaggacggcaccccg
gtcgacatcgtgctgaacccgctcggtgtgccgtcccggatgaacatcggccaggtcctg
gagacccacctcgggtgggtggccaagaccggctggagcgtggacggcgacgacgaggag
tggaagcgtcagctccgctcgatcgaggcgcacgagtccgagccggacaccaacgtggcc
actccggtcttcgacggtgcccgcgaggaggagatctccggtctgctggcgtcgaccctg
cccaaccgggacggcaagcagctgatcggccgcacgggtaaggcgcagctgttcgacggt
cgctccggcgagccgctgccggacccgatcgcggtcggctacgtctacatcctgaagctc
aaccacctggtcgacgacaagatccacgcccggtcgaccggcccgtactcgatgatcacg
cagcagccgctgggtggtaaggcgcagttcggtggccagcgcttcggtgagatggagtgc
tgggccatgcaggcgtacggcgccgcctacgccctgcaggagctgctgaccatcaagtcc
gacgacgtcctgggccgggtcaaggtctacgaggcgatcgtcaagggcgagaacatcccc
gagccgggcatcccggagtcgttcaaggtgctgctcaaggagctgcagtcgctgtgcctc
aacgtcgaggtgctctccagcgacggtgtggccctggagatgcgcgagaccgacgacgag
gtgttccgggcggcggaggagctgggcatcgacctgtcccggcgcgagccgagctcggtc
gaagaggtctga
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integrated database retrieval system
