Micromonospora tulbaghiae: CSH63_29990
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Entry
CSH63_29990 CDS
T05651
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
mtua
Micromonospora tulbaghiae
Pathway
mtua03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
mtua00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
CSH63_29990
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mtua03021
]
CSH63_29990
03400 DNA repair and recombination proteins [BR:
mtua03400
]
CSH63_29990
Enzymes [BR:
mtua01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
CSH63_29990
Transcription machinery [BR:
mtua03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
CSH63_29990
DNA repair and recombination proteins [BR:
mtua03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
CSH63_29990
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
HHH_XRCC3_RpoA
Motif
Other DBs
NCBI-ProteinID:
AYF31605
UniProt:
A0A1C4XG51
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All DBs
Position
6402198..6403220
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AA seq
340 aa
AA seq
DB search
MLISQRPSLSEESINETRSRFTIEPLEPGFGYTLGNSLRRTLLSSIPGAAVTSIKIDGVL
HEFTTIPGVKEDVVELVMNIKELCVSSEHDEPVSMYLRKQGPGDVTAGDIQPPAGVSVHN
PDLKLATLNGKGRLDMELTVERGRGYVTAAQNKQAGAEIGRIPVDSIYSPVLKVTYRVEA
TRVEQRTDFDRLIIDVETKPSMGPRTALASAGSTLVELFGLARELDETAEGIDIGPSPQD
AQLAADLALPIEELDLTVRSYNCLKREGINSVGELIGRTEADLLDIRNFGQKSIDEVKMK
LAGMGLGLKDSAPNFDPAHVVDAFGEADYDTDDYRETEQL
NT seq
1023 nt
NT seq
+upstream
nt +downstream
nt
atgctcatcagccagcgaccgtctctctccgaagagtcgatcaacgagacccgctcccgg
ttcaccatcgagccgctggagcccggcttcggttacacgctgggcaactcgctccggcgt
acgctgctgtcctccatcccgggtgcggcggtcacctcgatcaagatcgacggtgtgctg
cacgagttcaccacgatccccggggtcaaggaggacgtggtcgagctcgtcatgaacatc
aaggagctgtgcgtcagctccgagcacgacgagccggtcagcatgtacctgcgcaagcag
ggcccgggcgacgtgaccgccggtgacatccagcccccggccggtgtctcggtgcacaac
ccggacctgaagctcgccaccctcaacggcaagggccggctcgacatggagctgaccgtc
gagcggggtcgcggctacgtcacggcggcgcagaacaagcaggcgggcgccgagatcggc
cggatcccggtcgactcgatctactcgccggtgctcaaggtgacgtaccgggtcgaggcg
acccgcgtcgagcagcggaccgacttcgaccggctgatcatcgacgtcgagaccaagccg
tcgatgggcccgcgtaccgcgctggcctcggccggctcgacgctggtggagctgttcggg
ctcgcccgggagctggacgagaccgccgagggcatcgacatcgggccgtccccgcaggac
gcccagctggcggcggacctggccctgccgatcgaggagctggacctcaccgtccgctcc
tacaactgcctcaagcgcgagggcatcaactccgttggtgagctcatcgggcgtaccgag
gccgacctcctcgacatccgcaacttcggtcagaagtcgatcgacgaggtcaagatgaag
ctcgccgggatgggcctggggctgaaggactcggctccgaacttcgacccggcgcacgtc
gtggacgccttcggcgaggcggactacgacaccgacgactaccgcgagaccgagcagctc
tag
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