Mycobacterium tuberculosis Haarlem: TBHG_00662
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Entry
TBHG_00662 CDS
T02845
Name
(GenBank) DNA-directed RNA polymerase RpoB
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
mtul
Mycobacterium tuberculosis Haarlem
Pathway
mtul03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
mtul00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
TBHG_00662
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mtul03021
]
TBHG_00662
03400 DNA repair and recombination proteins [BR:
mtul03400
]
TBHG_00662
Enzymes [BR:
mtul01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
TBHG_00662
Transcription machinery [BR:
mtul03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
TBHG_00662
DNA repair and recombination proteins [BR:
mtul03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
TBHG_00662
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_45
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpb2_2
RNA_pol_Rpb2_1
Peptidase_M23
RnfC_N
Motif
Other DBs
NCBI-ProteinID:
EBA41176
LinkDB
All DBs
Position
764783..768319
Genome browser
AA seq
1178 aa
AA seq
DB search
MLEGCILADSRQSKTAASPSPSRPQSSSNNSVPGAPNRVSFAKLREPLEVPGLLDVQTDS
FEWLIGSPRWRESAAERGDVNPVGGLEEVLYELSPIEDFSGSMSLSFSDPRFDDVKAPVD
ECKDKDMTYAAPLFVTAEFINNNTGEIKSQTVFMGDFPMMTEKGTFIINGTERVVVSQLV
RSPGVYFDETIDKSTDKTLHSVKVIPSRGAWLEFDVDKRDTVGVRIDRKRRQPVTVLLKA
LGWTSEQIVERFGFSEIMRSTLEKDNTVGTDEALLDIYRKLRPGEPPTKESAQTLLENLF
FKEKRYDLARVGRYKVNKKLGLHVGEPITSSTLTEEDVVATIEYLVRLHEGQTTMTVPGG
VEVPVETDDIDHFGNRRLRTVGELIQNQIRVGMSRMERVVRERMTTQDVEAITPQTLINI
RPVVAAIKEFFGTSQLSQFMDQNNPLSGLTHKRRLSALGPGGLSRERAGLEVRDVHPSHY
GRMCPIETPEGPNIGLIGSLSVYARVNPFGFIETPYRKVVDGVVSDEIVYLTADEEDRHV
VAQANSPIDADGRFVEPRVLVRRKAGEVEYVPSSEVDYMDVSPRQMVSVATAMIPFLEHD
DANRALMGANMQRQAVPLVRSEAPLVGTGMELRAAIDAGDVVVAEESGVIEEVSADYITV
MHDNGTRRTYRMRKFARSNHGTCANQCPIVDAGDRVEAGQVIADGPCTDDGEMALGKNLL
VAIMPWEGHNYEDAIILSNRLVEEDVLTSIHIEEHEIDARDTKLGAEEITRDIPNISDEV
LADLDERGIVRIGAEVRDGDILVGKVTPKGETELTPEERLLRAIFGEKAREVRDTSLKVP
HGESGKVIGIRVFSREDEDELPAGVNELVRVYVAQKRKISDGDKLAGRHGNKGVIGKILP
VEDMPFLADGTPVDIILNTHGVPRRMNIGQILETHLGWCAHSGWKVDAAKGVPDWAARLP
DELLEAQPNAIVSTPVFDGAQEAELQGLLSCTLPNRDGDVLVDADGKAMLFDGRSGEPFP
YPVTVGYMYIMKLHHLVDDKIHARSTGPYSMITQQPLGGKAQFGGQRFGEMECWAMQAYG
AAYTLQELLTIKSDDTVGRVKVYEAIVKGENIPEPGIPESFKVLLKELQSLCLNVEVLSS
DGAAIELREGEDEDLERAAANLGINLSRNESASVEDLA
NT seq
3537 nt
NT seq
+upstream
nt +downstream
nt
gtgctggaaggatgcatcttggcagattcccgccagagcaaaacagccgctagtcctagt
ccgagtcgcccgcaaagttcctcgaataactccgtacccggagcgccaaaccgggtctcc
ttcgctaagctgcgcgaaccacttgaggttccgggactccttgacgtccagaccgattcg
ttcgagtggctgatcggttcgccgcgctggcgcgaatccgccgccgagcggggtgatgtc
aacccagtgggtggcctggaagaggtgctctacgagctgtctccgatcgaggacttctcc
gggtcgatgtcgttgtcgttctctgatcctcgtttcgacgatgtcaaggcacccgtcgac
gagtgcaaagacaaggacatgacgtacgcggctccactgttcgtcaccgccgagttcatc
aacaacaacaccggtgagatcaagagtcagacggtgttcatgggtgacttcccgatgatg
accgagaagggcacgttcatcatcaacgggaccgagcgtgtggtggtcagccagctggtg
cggtcgcccggggtgtacttcgacgagaccattgacaagtccaccgacaagacgctgcac
agcgtcaaggtgatcccgagccgcggcgcgtggctcgagtttgacgtcgacaagcgcgac
accgtcggcgtgcgcatcgaccgcaaacgccggcaaccggtcaccgtgctgctcaaggcg
ctgggctggaccagcgagcagattgtcgagcggttcgggttctccgagatcatgcgatcg
acgctggagaaggacaacaccgtcggcaccgacgaggcgctgttggacatctaccgcaag
ctgcgtccgggcgagcccccgaccaaagagtcagcgcagacgctgttggaaaacttgttc
ttcaaggagaagcgctacgacctggcccgcgtcggtcgctataaggtcaacaagaagctc
gggctgcatgtcggcgagcccatcacgtcgtcgacgctgaccgaagaagacgtcgtggcc
accatcgaatatctggtccgcttgcacgagggtcagaccacgatgaccgttccgggcggc
gtcgaggtgccggtggaaaccgacgacatcgaccacttcggcaaccgccgcctgcgtacg
gtcggcgagctgatccaaaaccagatccgggtcggcatgtcgcggatggagcgggtggtc
cgggagcggatgaccacccaggacgtggaggcgatcacaccgcagacgttgatcaacatc
cggccggtggtagccgcgatcaaggagttcttcggcaccagccagctgagccaattcatg
gaccagaacaacccgctgtcggggttgacccacaagcgccgactgtcggcgctggggccc
ggcggtctgtcacgtgagcgtgccgggctggaggtccgcgacgtgcacccgtcgcactac
ggccggatgtgcccgatcgaaacccctgaggggcccaacatcggtctgatcggctcgctg
tcggtgtacgcgcgggtcaacccgttcgggttcatcgaaacgccgtaccgcaaggtggtc
gacggcgtggttagcgacgagatcgtgtacctgaccgccgacgaggaggaccgccacgtg
gtggcacaggccaattcgccgatcgatgcggacggtcgcttcgtcgagccgcgcgtgctg
gtccgccgcaaggcgggcgaggtggagtacgtgccctcgtctgaggtggactacatggac
gtctcgccccgccagatggtgtcggtggccaccgcgatgattcccttcctggagcacgac
gacgccaaccgtgccctcatgggggcaaacatgcagcgccaggcggtgccgctggtccgt
agcgaggccccgctggtgggcaccgggatggagctgcgcgcggcgatcgacgccggcgac
gtcgtcgtcgccgaagaaagcggcgtcatcgaggaggtgtcggccgactacatcactgtg
atgcacgacaacggcacccggcgtacctaccggatgcgcaagtttgcccggtccaaccac
ggcacttgcgccaaccagtgccccatcgtggacgcgggcgaccgagtcgaggccggtcag
gtgatcgccgacggtccctgtactgacgacggcgagatggcgctgggcaagaacctgctg
gtggccatcatgccgtgggagggccacaactacgaggacgcgatcatcctgtccaaccgc
ctggtcgaagaggacgtgctcacctcgatccacatcgaggagcatgagatcgatgctcgc
gacaccaagctgggtgcggaggagatcacccgcgacatcccgaacatctccgacgaggtg
ctcgccgacctggatgagcggggcatcgtgcgcatcggtgccgaggttcgcgacggggac
atcctggtcggcaaggtcaccccgaagggtgagaccgagctgacgccggaggagcggctg
ctgcgtgccatcttcggtgagaaggcccgcgaggtgcgcgacacttcgctgaaggtgccg
cacggcgaatccggcaaggtgatcggcattcgggtgttttcccgcgaggacgaggacgag
ttgccggccggtgtcaacgagctggtgcgtgtgtatgtggctcagaaacgcaagatctcc
gacggtgacaagctggccggccggcacggcaacaagggcgtgatcggcaagatcctgccg
gttgaggacatgccgttccttgccgacggcaccccggtggacattattttgaacacccac
ggcgtgccgcgacggatgaacatcggccagattttggagacccacctgggttggtgtgcc
cacagcggctggaaggtcgacgccgccaagggggttccggactgggccgccaggctgccc
gacgaactgctcgaggcgcagccgaacgccattgtgtcgacgccggtgttcgacggcgcc
caggaggccgagctgcagggcctgttgtcgtgcacgctgcccaaccgcgacggtgacgtg
ctggtcgacgccgacggcaaggccatgctcttcgacgggcgcagcggcgagccgttcccg
tacccggtcacggttggctacatgtacatcatgaagctgcaccacctggtggacgacaag
atccacgcccgctccaccgggccgtactcgatgatcacccagcagccgctgggcggtaag
gcgcagttcggtggccagcggttcggggagatggagtgctgggccatgcaggcctacggt
gctgcctacaccctgcaggagctgttgaccatcaagtccgatgacaccgtcggccgcgtc
aaggtgtacgaggcgatcgtcaagggtgagaacatcccggagccgggcatccccgagtcg
ttcaaggtgctgctcaaagaactgcagtcgctgtgcctcaacgtcgaggtgctatcgagt
gacggtgcggcgatcgaactgcgcgaaggtgaggacgaggacctggagcgggccgcggcc
aacctgggaatcaatctgtcccgcaacgaatccgcaagtgtcgaggatcttgcgtaa
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