Methylosinus trichosporium: CQW49_16775
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Entry
CQW49_16775 CDS
T05155
Name
(GenBank) excinuclease ABC subunit UvrB
KO
K03702
excinuclease ABC subunit B
Organism
mtw
Methylosinus trichosporium
Pathway
mtw03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
mtw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
CQW49_16775
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mtw03400
]
CQW49_16775
DNA repair and recombination proteins [BR:
mtw03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CQW49_16775
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
CQW49_16775
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrB_inter
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_22
UB2H
AAA_30
Kinesin
Microtub_bd
DUF87
Motif
Other DBs
NCBI-ProteinID:
ATQ69351
UniProt:
A0A2D2D2X3
LinkDB
All DBs
Position
3521543..3524071
Genome browser
AA seq
842 aa
AA seq
DB search
MASSPKKPKDPARPTRAKAAKPEVAPIAPHLQALLNPGLAERQAGFEEAPQAGYDPGAVI
GVDDELVEKLELRGPGGVTATMESLEQLLKLGDPNLREKKPWTPHRPERPQKSEGGVKFD
LVSDYEPRGDQPQAIAELTAGVGANERDQVLLGVTGSGKTYTMAQVIARTQRPALVLAPN
KTLAAQLYGEFKSFFPNNAVEYFVSYYDYYQPEAYVPRTDTYIEKESSVNEQIDRMRHAA
TRSLLERDDVIIVASVSCIYGIGSVETYTAMTFGVSLGEKLEQRQLVTDLVALQYRRISS
DFTRGTFRVRGDTVDIFPAHYEDRGWRISFFGDEVESICEFDPLTGKKTQDLEFVKVYAN
SHYVTPRPTLLQSIKAIKDELRARLGELNNAGRLVEAQRLEQRTRFDLEMMEATGSCAGI
ENYSRYLTGRRPGEPPPTLFEYLPDNAIVFADESHVSIPQIGAMYKGDFRRKATLAEYGF
RLPSCMDNRPLRFEEWDAMRPQTIAVSATPGDWEMEQTGGVFVEQVIRPTGLIDPPVEIR
PARSQVDDLLGEVKAVSDLGYRSLVTVLTKRMAEDLTEYLHENGVRVRYMHSDIDTIERI
EIIRDLRLGAFDVLVGINLLREGLDIPECGFVGILDADKEGFLRSETSLVQTIGRAARNV
DGRVILYADSVTGSMKRAMDETDRRRAKQQAYNAEHGITPASIKRDIADILGSLAEQDHV
TVDAGLSELAPGHNMQATLADLEKRMKAAAADLAFEEAARLRDEISRLQRAELLAEANPL
MRPRGRGGAGEESVPGTRARKPTDADMGPHNFGGGEARPLSRPPPRSMAGKAGTKVVKGK
LQ
NT seq
2529 nt
NT seq
+upstream
nt +downstream
nt
atggcctcttccccgaaaaagccgaaggaccccgcgagaccgacgcgcgcaaaggccgcc
aagcccgaggtcgcgccgatcgcgccgcatttgcaggcgctgctcaaccccggcctcgcc
gagcggcaggcgggattcgaggaggcgccgcaggcgggctatgatccgggcgcggtgatc
ggcgtcgatgacgagctcgtcgaaaagctcgagcttcgcgggccgggcggcgtcaccgcg
acgatggagagcctcgagcagctgttgaagctcggcgatcccaatctgcgcgagaagaag
ccgtggacgccgcatcgtcccgagcgcccgcagaagagcgagggcggcgtcaaattcgac
ctcgtctccgattatgagccgcgcggcgaccagccgcaggcgatcgccgagttgaccgcc
ggcgtcggcgccaatgagcgcgaccaagtgctgctcggcgtcaccggctccggcaagacc
tatacgatggcgcaggtgatcgcgcgcacgcagcggccggcgctggtgctcgcgcccaac
aagactctcgccgcccagctctatggcgagttcaagagcttcttccccaacaacgccgtc
gaatatttcgtctcctattacgactattatcagccggaggcctatgtgccgcgcaccgac
acctatatcgagaaggaatcctcggtgaacgagcagatcgaccgcatgcgccacgccgcg
acgcgctctctgctcgagcgcgacgacgtcatcatcgtcgcgtccgtctcctgcatctac
ggcatcggctcggtcgaaacttatacggcgatgaccttcggcgtcagcctcggcgagaag
ctggagcagcgccagctcgtcaccgatctcgtcgccctgcaatatcgccgcatcagctcc
gacttcacgcgcggcacgtttcgcgtgcgcggcgatacggtcgatatttttccggcgcat
tatgaagaccgcggctggcgcatctccttcttcggcgacgaggtggaatcgatctgcgaa
ttcgatccgctcaccggaaagaagacgcaggatctcgaattcgtgaaggtctatgcgaac
tctcactatgtgacgccgcgcccgacgctgctgcaatcgatcaaggcgatcaaggacgaa
ttgcgcgcgcggctcggcgagctgaacaacgccgggcgcctcgtcgaggcgcagcgattg
gagcagcgcacccgcttcgacctcgagatgatggaggcgaccggctcctgcgccggcatc
gagaattattcgcgctatctcaccggccgccggccgggcgagccgccgccgaccctgttc
gaatatctgcccgacaacgccatcgtcttcgccgacgagagccatgtgagcattccgcag
atcggcgcgatgtacaagggcgacttccgccgcaaggccacgctcgccgaatatggattc
cgcctgccctcctgcatggacaatcggccgctgcgcttcgaggaatgggacgcgatgcgg
ccgcagaccatcgccgtctcggcgacgcccggcgattgggagatggagcagaccggcggc
gtcttcgtcgagcaggtcattcgtccgaccggcctcatcgatccgccggtcgagattcgc
cccgcgcgctcgcaggtcgacgatctgctcggcgaggtgaaggcggtgagcgatctcggc
tatcgctcgctggtcaccgtgctgaccaagcgcatggcggaagacctcaccgaatatctg
cacgagaatggcgtgcgcgtgcgctacatgcattcggacatcgacacgatcgagcgcatc
gagatcatccgcgacctacgtctcggcgccttcgacgtgctggtcggcatcaatctgttg
cgcgaagggttggatattcccgaatgcggcttcgtcggcattctcgacgccgacaaggaa
gggtttctgcgctccgagacctcgctggtgcaaacgatcggccgcgccgcgcgcaatgtc
gacgggcgcgtgatcctctatgccgattccgtcaccggctcgatgaagcgcgccatggac
gagaccgaccgccgccgcgccaagcagcaggcctataatgccgagcatggcatcacgccg
gcgagcatcaagcgcgacatcgccgatattctcggctcgctcgccgagcaggatcatgtg
accgtcgacgccggcctctcggagctggcgcccggccacaacatgcaggcgacgctcgcc
gatctcgagaagcgcatgaaggcggcggccgccgatctcgccttcgaggaggcggcgcgc
ctgcgcgacgagatttcccgcctgcagcgcgccgagctattggccgaagccaatccgctg
atgcgcccgcggggacgcggcggcgcgggcgaggagtccgttcccggcacgcgtgcgcga
aaaccgacggatgcggatatgggtccacacaacttcggcggcggcgaggcgcggccgttg
agtcgtccgccgccgcgatcgatggcggggaaggcggggacgaaggtggtgaaggggaag
ctgcaatag
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