Mesitornis unicolor (brown roatelo): 104535952
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Entry
104535952 CDS
T08455
Symbol
COL6A3
Name
(RefSeq) collagen alpha-3(VI) chain
KO
K06238
collagen type VI alpha
Organism
mui
Mesitornis unicolor (brown roatelo)
Pathway
mui04510
Focal adhesion
mui04512
ECM-receptor interaction
mui04518
Integrin signaling
mui04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
mui00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
104535952 (COL6A3)
04518 Integrin signaling
104535952 (COL6A3)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
104535952 (COL6A3)
09142 Cell motility
04820 Cytoskeleton in muscle cells
104535952 (COL6A3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
mui04147
]
104535952 (COL6A3)
00536 Glycosaminoglycan binding proteins [BR:
mui00536
]
104535952 (COL6A3)
Exosome [BR:
mui04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
104535952 (COL6A3)
Glycosaminoglycan binding proteins [BR:
mui00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
104535952 (COL6A3)
Hyaluronan
Extracellular matrix or blood plasma proteins
104535952 (COL6A3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VWA
VWA_2
Collagen
VWA_3
Kunitz_BPTI
fn3
Motif
Other DBs
NCBI-GeneID:
104535952
NCBI-ProteinID:
XP_010177770
LinkDB
All DBs
Position
Unknown
AA seq
3137 aa
AA seq
DB search
MRKHQHLPFAAMFCLLLSGFCSVHAQQQAAAKTVAVADIIFLVDSSWSIGNEHFQLIREF
LYDVVKALDVGGNDFRFALVQFSGNPHTEFQLNTYPTTRDVLSHIANMPYMGGGIKTGKG
LEYLIENHLTKAAGSRASEGVPQVIIVLTDGRSQDDVALPSSVLKSAHVDMFAIGVQDAV
EGELKEIASEPFDTHLFNLENFTALHGIVGDLVASVRSSMTPEKAGAKGLVKDITAQESA
DLIFLIDGSNNIGSVNFQAIRDFLVNLIESLRVGAQQIHIGVVQYSDQPRTEFALNSYST
KADVLDAVKALSFLGGEEVNTGAALEFVVENLFAQAGGSRIEEAVPQILVLISGGESSDD
IREGLLAVKQASIFSFSIGVLNADSAELQQIATDGSFAFTALDIRNLDALRELLLPNIVG
VAQRLILLEAPTIVTEVIEVNKKDIVFLIDGSTALGTAPFNSIRDFVAKIVQRLEVGPDL
IQVAVAQYADTVKPEFYFNTHQSRKDVMANVKRMKLMGGTALNTGSALDFVRNNFFTSAA
GCRMAEGVLPMLVLITGGKSNDAIDQAAAEMKRNRILILAIGSRNADLAELQEIAHERDF
VFNPNDFRLQFMQAILPEVLSPIRTLSGGPIIQEPPSVQVTKRDIIFLLDGSLNVGNANF
PFVRDFVATLVNYLDVGSDKIRVGLVQFSDTPKTEFFLYSYQTKSDIIQRVGQLRPKGGS
VLNTGSALNFVLSNHFTEAGGSRINEQVPQVLVLVTAGRSADPFLQVSNELARAGVLTFA
VGVRNANKAELEQIAFNPRMVYLMDDFSALAALPQELNKPITTFVSGGVEEVPLAPTESK
KDILFLIDGSANLLGSFPAVRDFVHKVISDLNVGPDATRVAVAQFSDTIQVEFDFAELPS
KQDMLVKVKRMKIKTGKQLNIGAALDEAIRRLFVKEAGSRIEEGIPQFLVLLVAGRSSDD
VEQPSDALKQSGVVTFAIKAKNADPVELERIVYAPQFILNVDSLLRISELQPNIVNLLKT
IQLQPTVVERGEKKDVVFLIDGSDGVRRGFPLLKTFVQRVVESLDIGRDKVRVAVAQYSN
VIQPEFLLDTYEDKADLISAIQELKIMGGSPLNTGAALDYLIKNVFTVSSGSRIAEGVPQ
FLILLTADRSQDDVRRPSVVLKTSGTVPFGIGIGNADLTELQTISFLPDFAISVPDFSQL
DTVQQVVSNRVIRLTKKEIESLAPDLVFTSPSPAGVKRDVVFMVDGSRYAAQEFYLIRDL
IDRIVNNLDVGFDTTRISVVQFSEHPHVEFLLNAHSTKDEVQSALRRLRPQGGQQVNMGE
ALEFVAKTIFTRPSGSRIEEGVPQFLVILSSRKSDDDLEYPSRQVKQVGVAPMVVAKNVD
PEEMIQISLTPDYVFQVSSFQELPILEQKLLTPIETLTGDQIRRLLGDVEPPVDISGDEK
DIVFLIDSSDSVRSDGLAHIRDFISRIVQQLEVRPNKVRIGVVQFSNNVFPEFYLKTHKS
KNAVLQAIRRLRLRGGSPVNAGKALDYVVKNYFIKSAGSRIEDGVPQHLVVILGDRSQDD
VSRPANVITSTSIKPLGVGARKVDRDQLQVITNDPERVLVVQDFTGLPTLEKKIQSILEE
LPIPTTETPGILGPGGKKQADIVFLLDGSINLGRDNFQEVLQFVYSVVDAIYRDGDSIQV
GLAQYNSDVTDEFFLKDHSTKPQILDAINRVIYKGGLTANTGAAIKHIQAKHFVKEAGSR
IDQRVPQIAFIVTGGKSTDDGPSASLEIAQKGVKVFAVGVKNIDLKEVSRLASESATSFR
AATTQELSELNEQVLVTLEAAMEEKLCPGPTDVMRDCDLDVILGFDVTDVGPGQNIFNSQ
RGLESRVESVLNRITQMQKISCTGNQAPNVRVAIMAQARGGAVEGLDFSEYQPELFERFQ
GMRTRGPYFLTADTLRSYLNKFRSSPSGSTKVIIHFTDGADDSIGQLEAASSTLHTEGVN
ALIFVGLDRVSNFDQVMQLEFGRGFTYNRPLRVNLLDLDFELAEQLDNIAERTCCKVPCK
CSGQRGDRGVPGPIGPKGATGDLGYGGYPGDEGGPGERGPPGVNGTQGFQGCPGHRGTKG
SRGFPGEKGELGEMGLDGIDGEEGDKGLPGSSGEKGFSGRRGDKGVKGERGERGDRGLRG
DPGDSGADNTQRGTKGQKGEIGPMGEPGPAGLEGQDGGVGRKGMTGRRGPIGVKGAMGSL
GQAGPAGEQGMRGPQGPPGQIGTPGIRGEQGVPGPRAGGGLPGVSGERGRIGPLGRKGEP
GNPGPKGPNGQQGPRGEMGDDGRDGIGGPGPKGRKGERGFIGYPGPKGGPGDRGVGGGPG
PKGNRGRRGNAGDAGTPGQKGEVGYPGPSGLKGDKGESRDQCALVRNIKDKCPCCYGPKE
CPVFPTELAFAIDTSSGVVRDVFNRMKQTVLRVVNNLTIAESNCPRGARVALVTYNNEVT
TEIRFADARKKSSLLQQIQNFQATLTTKPRSLETAMSFVARNTFKRARSGFLMRKVAVFF
SNGETRASSQLNDAVLKLYDAGVTPVFLTSRQDPVLARALEINNTAVGHAIVLPTSGSQL
NETIRRLLTCHICLDVCDPDPSCGSQRPVFRDRRAAPTDIDTDIAFIMDSSESTTPLQFN
EMKKYISHLINNLEISSEPKVSQHHARVAVLQQAPYEYETNSSFPPVKTEFSLTDYGSKE
KIINYLHNQMTQLHGTRAIGSAIEHTMAHIFESAPNPRDLKVIVLMMTGKVNKQELEYLQ
KVVINAKCKGYFFVILGIGRKVSAKSIYSLASEPNDVFFKLVDKPGELHEEPLLRFGTLL
PSFIRSDFAFYLSPEIRKQCEQLQSDQQAKSQSPRHTGHKAVYVAPNVTISRTLSASSTV
TATIKPVVSTNTRARTTTTKATAQTRATDQTTASTAVQVNMTTQSTASTAGHTKATGRTT
ANTTATAGGGRRRQGAKTHDIQITDVTENSARLRWASPEPVNAYVFDIAVTLAHDHSLVQ
KQNLTGTEHVIRGLRSGQKYIVLITGYQKSQPKVTYTGTFSTKTLAQSKVSLAHMMLNTE
PLEGPESVTDICWLPKDEGTCRTFVLKWYYDIKTKSCARFWYGSCGGNENRFDTQKECEK
VCIPGNINPGVVTTIET
NT seq
9414 nt
NT seq
+upstream
nt +downstream
nt
atgaggaaacaccaacatttgccctttgcggcaatgttttgcctcctcctctcaggcttt
tgctcagttcatgcccagcagcaagcagctgccaaaaccgttgctgtggctgatataata
tttctagtggattcctcttggagcattgggaacgaacatttccaactcattcgagagttt
ctgtatgatgttgtaaaagctttagatgtgggaggaaatgattttcgctttgccctggtc
caattcagcggaaacccccacacagagttccagttaaatacctaccccactacccgagac
gtcctgtcccatattgccaacatgccttacatggggggaggcatcaagactggaaaagga
ttagagtacctaatcgagaaccacctcactaaagctgctggaagcagagccagtgaaggc
gttccgcaggttattatagtgttaacggacggacgatcccaggatgatgtggctctgcca
tcatctgtccttaaatcagcccatgtagacatgtttgcgatcggcgtgcaggacgcagtg
gaaggggagttaaaggaaatagcaagcgaacccttcgatacgcaccttttcaacctagag
aattttaccgctctccacggcatagttggagacttagtggcgagtgtccgttcatccatg
actccagaaaaagctggggccaaaggactggttaaagacatcacagctcaagagtctgct
gaccttattttccttattgacggatcaaacaacatcggaagtgtcaattttcaagccata
cgtgatttccttgtaaatttgattgaaagcctcagagttggagctcagcaaatacacatt
ggggtggtgcagtatagtgatcaacccagaaccgagttcgctttgaacagctactccaca
aaagcggatgttctggatgccgtgaaggcacttagtttcctcggtggcgaggaagtgaac
accggtgcggcactggagtttgtggtggagaacctcttcgcccaggcgggaggcagcagg
atagaggaagcggtgcctcagattttagtgctgataagtggtggagagtctagtgatgat
atccgagagggcttgttagcggtgaagcaagctagtatattttcatttagcattggggtc
ctgaatgctgacagtgcagagctgcagcagattgctactgatggaagcttcgcatttact
gccctggatatccgtaaccttgatgctcttcgagaattattactgcccaacattgttgga
gtggcccaaagacttattttgttagaggccccaaccattgtgactgaagttattgaagtg
aacaagaaggatatagtcttcctgatagatggctcaactgctttggggactgcccccttt
aactcaattcgtgattttgttgccaaaattgtccaaaggctggaagttggacccgacctg
atccaagttgcggtggcacagtacgcagacactgtgaagccagagttttattttaacacc
caccagagcagaaaggatgtgatggctaatgtaaaaagaatgaagctcatgggtggtacg
gcactcaacactggctcagcactggactttgtgaggaacaacttcttcaccagtgctgct
gggtgcaggatggcggaaggggtgctccccatgctggtgctcatcactggtggtaagtcc
aacgatgccattgaccaagctgcggcagagatgaaaaggaaccggatactgatccttgcc
attgggtcaagaaacgctgacctggcagaacttcaagaaattgcccatgagagagatttt
gtgttcaacccaaatgacttccgccttcagttcatgcaagccattcttcctgaagtgctg
tcaccaatccggacgctctctggaggaccgattatccaagaaccaccatcagttcaagta
accaaaagggatatcatctttcttttggatggatcactcaacgtcggaaatgccaacttc
ccctttgtgcgtgactttgttgccactctagttaactaccttgatgttggaagtgacaaa
atccgcgttggcttagtgcaatttagtgacactcctaaaactgagttctttctatactcg
taccaaaccaaatcagacataattcaacgtgtggggcagctgaggcccaagggggggtca
gtgctgaacactggctctgcactgaactttgtgctttcgaatcacttcacggaagctggt
gggagcagaataaatgaacaagtgccacaggtcctagtcctggtgacggcagggaggtct
gctgatcccttcttgcaagtttccaatgaattagctcgggctggagtgctgacttttgct
gttggagttaggaatgcgaataaggcagaacttgaacagattgcctttaatccaagaatg
gtatatttaatggatgatttcagtgctctggcagctttaccccaggagttaaataagcct
ataacaacatttgttagtggaggtgtggaagaggttccactcgccccaacagaaagcaag
aaagatattttattcctgattgatggttcagccaacctcttgggtagctttcctgctgtc
cgggactttgtacacaaagtaatttctgacctgaatgtgggtcccgatgccacacgagta
gctgtggcgcagttcagtgacaccatccaagttgaatttgactttgctgaactcccatct
aaacaagacatgcttgtcaaagtgaaaaggatgaagataaaaactgggaagcaactgaac
attggagctgctctagatgaagctataaggaggctgtttgtgaaggaagctggaagcagg
atcgaagaagggattcctcagtttttggtcctccttgttgctgggagatcaagtgatgac
gtggagcaaccatcagatgctctgaagcaatctggagttgtgacctttgctatcaaagcc
aaaaatgccgaccctgtagagctggaaaggattgtttacgccccacagttcattctgaac
gtcgactccctccttcggatttcagagcttcagccaaacatagtcaatctgttgaaaact
atccagcttcagccaacagtagttgagagaggtgagaagaaggacgtggtgtttctaatt
gatgggtcggatggtgtcagaagaggtttccctctgctgaagacctttgtccaaagagtt
gttgaaagcctggatatcggtcgtgacaaggtccgtgttgctgttgcgcagtacagcaat
gtcatacaacctgaattcttacttgacacctatgaagacaaagcagatctcatcagcgcc
atccaggagctgaagattatgggaggatctcctctgaacactggagcagccctcgactat
ctcatcaagaacgtcttcacggtgtcgagcggcagcaggatagcggagggtgtcccgcag
ttcctgatcctgctgactgctgaccggtcccaggatgatgtgaggaggccctcagtggtc
ctgaagacgagtggcacagtgccctttggcattggcattggaaatgctgacctcacagag
ctgcaaacgatttccttcctcccggattttgctatctctgtgcctgacttcagccagctg
gatacagtgcagcaggtcgtctcgaacagagtcatccggctgaccaagaaagagatagag
tcacttgcccctgatctggtttttacatcacccagcccagcgggtgtgaagagggatgtg
gtgttcatggttgatggctcccgttatgctgcccaggagttctacctcatccgtgatctc
attgacaggatagtgaacaacctggacgtgggctttgacaccacgaggatttcggtggtc
cagttcagtgagcatccccatgtggagttcctgctcaatgcccactccaccaaggatgag
gtgcagagtgctctgagacggctgcggccacagggtggccagcaggtgaacatgggggag
gcccttgagtttgtggcaaagaccatcttcacccggccctctgggagccgcatagaggag
ggcgtccctcagtttttggtcatcctctcgtctcgcaagtccgatgatgacttagagtac
ccatcacgacaagtcaaacaagtaggggtggcacctatggtggtggcaaagaatgtggat
cctgaggaaatgatacagatttcccttactcctgattatgtgttccaagtctccagcttc
caggaactgcccatcctcgagcagaagctgctcactcctattgaaaccctgaccggggac
caaatcagacggctgctgggagatgtggaaccccctgtagacatttctggtgatgaaaag
gacatagtcttcctcattgacagctctgacagtgttagatccgatgggcttgcccacatt
cgagatttcatcagcagaattgttcagcagctggaagttcggccaaacaaagtgcgaatt
ggtgtggtgcagttcagcaataacgtcttccccgagttctacctgaagacccacaagtcc
aaaaatgccgtcctgcaagccatccgccgcttgaggcttagaggagggtcccctgtgaat
gctggcaaagccctagactacgtggtgaaaaactacttcatcaaatcagcagggagcagg
atagaagatggagttccccagcacctagttgtcatccttggagatcggtcccaggatgac
gtgagcaggcctgctaacgtgatcacttcaacaagcattaaacctctgggtgttggagcc
aggaaagtggacagggaccagctgcaggtcattaccaacgatcctgagcgtgtgcttgtg
gtacaggacttcacaggactcccaactttagaaaagaagatccagagtattcttgaagag
cttccaatacctacaacagaaactcctggaattttaggacctggaggtaaaaagcaggct
gacattgtgtttttgctggacggctccatcaatctgggaagggataacttccaagaagtc
ctccagtttgtgtactctgtggtagatgccatttatagggatggtgactctatccaggta
ggactggcccagtacaactcagatgtcactgatgagtttttcctcaaggaccactccacc
aaacctcagattttagatgccatcaacagagtcatctacaaaggtggcctaacagcaaac
actggagcagccatcaagcacatccaagcaaaacattttgtgaaggaggctggcagccga
attgaccagagggtgcctcagattgccttcatcgtcacaggtgggaagtccacggatgac
gggccaagtgcctccttggaaatcgcgcagaaaggcgtcaaggtatttgcagtcggtgtg
aaaaacattgacctgaaggaagtcagcaggctggccagtgaaagcgccacaagtttcaga
gcagccacaactcaggagctgtctgagctgaatgagcaggtcctggttacactggaagcc
gctatggaggagaaattgtgcccaggaccgacagacgttatgagagattgtgacttagat
gtgatacttggctttgatgtcacggatgttgggcccggccaaaatatatttaattcccag
agaggtttggagtccagagttgagtctgtgctgaatagaataactcagatgcagaagatc
agctgcactggcaaccaggcgcccaacgtcagggtagccatcatggcccaggctcgcggg
ggagccgtggagggactggacttctctgagtaccagcctgagctcttcgagaggttccag
ggcatgcgcacccgcgggccctattttctcacggcagatacactgaggtcctacctgaac
aaattcagatcctcgccctctggcagcaccaaagtcataatccattttactgatggtgca
gatgactctataggtcagctggaggctgcttcatctactctgcatacagaaggtgtcaac
gctctcatctttgttgggctggaccgagtgagcaattttgaccaagtgatgcagctggag
tttggtcgtgggttcacctacaacagaccgctcagagttaatctgctggacttggatttc
gagctggcagagcagctagacaacattgcagagaggacgtgctgcaaggtcccatgcaag
tgctcagggcagagaggggacagaggtgtgccaggccccataggaccaaagggtgccaca
ggtgatcttggctatggaggctatcctggtgatgaaggaggaccgggagagcgtggacct
ccaggtgtgaacgggacacagggttttcaaggatgccccggacacagaggaaccaagggt
tctcgaggattcccaggagagaagggtgaactgggagaaatgggtctggatggcattgac
ggagaagagggtgacaagggtttgccaggttcctctggagagaagggattctctggcagg
aggggtgacaagggagttaaaggcgaacgaggggaacgaggtgaccgtgggctccgtgga
gacccgggagattcaggagctgataatactcaacggggaaccaaaggccaaaagggtgaa
attggaccaatgggagagccgggaccagcagggctggagggccaagacggtggagtcggg
aggaagggtatgacaggacgaaggggaccgataggagttaagggtgccatgggctcgctc
ggtcaagcagggccagcaggagaacaaggcatgagaggaccacagggtccgcctggccag
atcggcacaccaggcataagaggagagcagggcgttcctggacccagggccggtggtgga
ctaccaggagtgtcaggggaacgaggcaggatcggtcccctgggacgaaagggtgagcct
ggaaaccctggacctaaagggccaaatggacagcagggcccccgaggagagatgggtgat
gatggacgagatggaataggtggcccaggtcctaaaggcagaaagggagaacgtggcttc
ataggctacccaggacccaagggtggacctggtgaccgtggtgttggtggaggtcccggc
cctaaaggaaacagaggtcgcagaggaaatgcaggagatgctgggacacctggtcagaaa
ggagaggttggataccctggaccctctggacttaaaggcgataaaggagaatccagagat
caatgtgcacttgtacggaacatcaaagacaaatgcccttgctgctatggtcccaaggag
tgccctgtcttcccaactgagctggcctttgcaattgacacttcctcaggcgtcgtgagg
gatgttttcaacaggatgaagcaaactgtgctcagagtggtcaacaacttgaccattgct
gagagcaactgtcctcggggtgctcgagtggccctggtcacctacaacaatgaggtcact
acagagatccgctttgctgatgccaggaagaagtcaagcctcctccagcagatccaaaac
ttccaggctaccctgaccacaaagccacgcagcctggagactgccatgtcctttgtggcc
aggaatacctttaagcgtgcccgaagtggcttcctcatgaggaaggtggctgtctttttc
agtaacggggagacaagagcctcctcgcagctcaacgatgccgtgttgaaactctacgat
gctggggtcacgcctgtgttcctcaccagcaggcaggacccagttcttgccagagctctg
gagatcaacaacacagcagttggacatgcaattgttcttccaaccagtggcagtcagctg
aatgaaactatccggaggctcttgacttgtcacatttgtctggatgtgtgtgaccctgat
ccctcctgtggtagtcagagacccgtattcagagacagaagggcagccccaacagatata
gacactgacatcgccttcatcatggatagctcagagtccaccacccctctgcagttcaat
gagatgaagaagtatatttcccaccttataaataacctggaaatcagctctgagccaaaa
gtatcccagcaccatgcaagagtggcagttctccagcaagctccttatgaatatgaaacc
aactcaagctttccacccgtaaaaactgagttttcactaactgattatggatccaaagag
aagatcattaactaccttcacaaccaaatgacccagctccatggcacacgggctatagga
agtgcaattgaacacacaatggctcatatttttgaaagtgcaccaaaccctcgggatcta
aaagtcatagttctgatgatgaccggaaaagtaaataaacaagaacttgagtacctgcag
aaggtagttatcaatgcaaaatgcaaagggtacttctttgttatcttgggcattggcagg
aaggtgagtgccaagagtatctatagcctagctagtgagccgaacgatgtgttcttcaaa
ttggttgacaaaccaggagagcttcatgaagagcccttgctacgctttgggacactgctg
ccatcttttatcagaagtgactttgctttctacctgtctcctgagataaggaaacagtgc
gagcagctccagagtgatcagcaagccaaaagccagagcccccggcacacaggccacaaa
gcagtgtatgtggcacccaatgtgaccataagccgaaccctcagtgccagcagcacggtc
actgcaaccatcaagcctgttgtgagcaccaacacccgtgccagaaccaccactaccaaa
gccacggcccagaccagagccaccgaccagacaacagccagcactgcggtccaggtgaac
atgaccacgcagagcacagcaagcactgctggccacaccaaagccactggccgcaccacc
gcgaacaccacggccaccgcaggaggtggcaggagaagacaaggcgcaaagacccatgac
attcagatcacagatgtcaccgagaacagtgccaggctgcgctgggccagccccgagcca
gtcaacgcctatgtttttgacatcgccgtcaccttagcacatgaccactctcttgtgcag
aagcaaaacctgaccggcactgaacacgtcatccgaggactcagaagcggacaaaaatac
attgtcctcattacaggctaccagaaatcccaacccaaagtaacctacacagggacgttc
agcacaaagaccctagcacagtccaaggtgtccctggcccacatgatgctcaacaccgag
ccactggaagggcctgagagtgtcacggatatctgctggctgccaaaagatgaggggacc
tgcaggacctttgtgctgaagtggtactacgacatcaagaccaagagttgcgcccggttc
tggtatggcagctgtggtggcaacgagaacagatttgacacgcagaaagaatgtgaaaaa
gtttgcatccctggtaacatcaaccctggcgtggtgacgacaatagaaacatag
DBGET
integrated database retrieval system
