Pseudoduganella umbonata: FCL38_24700
Help
Entry
FCL38_24700 CDS
T06138
Symbol
xth
Name
(GenBank) exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
mum
Pseudoduganella umbonata
Pathway
mum03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
mum00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
FCL38_24700 (xth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mum03400
]
FCL38_24700 (xth)
Enzymes [BR:
mum01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
FCL38_24700 (xth)
DNA repair and recombination proteins [BR:
mum03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
FCL38_24700 (xth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
Exo_endo_phos_2
Motif
Other DBs
NCBI-ProteinID:
QCP13271
LinkDB
All DBs
Position
complement(5882921..5883691)
Genome browser
AA seq
256 aa
AA seq
DB search
MPKIISANLNGIRSAAKKGFFDWMGTQSADFICVQELKCQASDMTDQFRNPHGYHGHFHY
AEKKGYSGTGVYSKIEPDAVKIGFGSPEFDAEGRYVRCDFGDLTVISVYCPSGSSSPERQ
EAKFRFMELFLPHLMGLRAEGREVVICGDWNIAHKEIDLKNWKGNLKNSGFLPEERAWLS
RVFDECGYVDVHRGLDPRPEQYTWWSNRGQAYAKNVGWRIDYHVATPGIAQCAQAVSVYK
DVKFSDHAPLIIDYLR
NT seq
771 nt
NT seq
+upstream
nt +downstream
nt
atgccaaagatcatctccgccaacctgaatggcatccgctccgccgccaagaagggcttt
ttcgactggatgggcacccagtccgccgatttcatctgcgtacaggaactcaagtgccag
gccagcgacatgacggaccagttccgcaatccgcatggctaccacggccatttccactac
gccgagaagaaaggctattcgggcaccggggtctacagcaagatcgaaccggacgccgtg
aagatcggcttcggcagccctgaattcgatgccgagggccgctacgtgcgctgcgacttc
ggcgacctgacggtcatttccgtgtactgcccgtccggctcgtcgtcgccggaacggcag
gaagccaaattccgcttcatggagctgttcctgccccacctgatggggctgcgcgccgaa
ggccgtgaagtcgtcatctgcggcgactggaacatcgcgcacaaggaaatcgacctgaag
aactggaagggcaacctcaagaattccggctttctgccggaagagcgcgcgtggctgagc
cgcgtcttcgacgaatgcggctacgtggacgtgcaccgcggcctcgacccgcgcccggaa
cagtacacgtggtggagcaaccgcggccaggcctatgcgaagaacgtcggctggcgcatc
gactaccacgtcgccacgccgggcatcgcgcaatgcgcgcaagccgtctccgtctacaag
gacgtgaagttttccgaccacgcgccgctgatcatcgactacctgcgttga
DBGET
integrated database retrieval system
