Meriones unguiculatus (Mongolian gerbil): 110540169
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Entry
110540169 CDS
T05884
Symbol
Skic3
Name
(RefSeq) superkiller complex protein 3
KO
K12600
superkiller protein 3
Organism
mun
Meriones unguiculatus (Mongolian gerbil)
Pathway
mun03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mun00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
110540169 (Skic3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mun03019
]
110540169 (Skic3)
Messenger RNA biogenesis [BR:
mun03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ski complex
110540169 (Skic3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_1
TPR_2
TPR_19
TPR_16
TPR_14
TPR_17
TPR_8
TPR_CcmH_CycH
TPR_11
TPR_12
ANAPC3
TPR_9
ARM_TT21_C
TPR_15
Fis1_TPR_C
Sey1_3HB
ARM_TT21_2nd
BTAD
Retrotran_gag_2
SNAP
TPR_30
Coatomer_E
TPR_20
Motif
Other DBs
NCBI-GeneID:
110540169
NCBI-ProteinID:
XP_060239564
LinkDB
All DBs
Position
5:28444622..28557056
Genome browser
AA seq
1562 aa
AA seq
DB search
MSSKEVKTALKSARDAIRNKEYKEALKHCKTVLKQEKNNYNAWVFIGVAAAELEQPEQAQ
GAYKKAAELEPEQLLAWQGLASLYEKCNHVNAKDDLPAVYQKLLDLYESVDRQKWCDVCR
KLVDLHHQEKKYLEVSRTWYKLIKIRQEDGADKQELHELWRKLTQLLSENIEDQNNETQQ
MLLTAFENALDLAESIPSEDHQVLYRHFIECLSKFPHEATRLKKACEEMITIYPTAQYPL
EVICLYLIESGSLIDEGQQYCCKLVEMNPKSGPGLIGLGVKALQNKKYEDAVNHLTEGLK
ESPLCITAWCHLAEAQVKMHRPREAILSCNQALKTIDNVGASGARLHQRNLCLRLKAEAL
LKLSDCESWEEAVRTLGQVSDADKTPGLLVLQGLAHLNMGAVGEAMKIMEDLVASHPDLA
KVHALQAAVHFTKKDYLQAETCFLRALEKDPEVADYHFQLGLTYWLMGEETRTDKAKALT
HFLKAARLDAYMGKAFCYLGHYYRDVAGDRSRARGCYRKAFELDDMDAESGAAAVDLSVE
LEDMETALGILTAVTQKASAGAAKWAWLRRGLYYLKAGQHSQAVADLQAALRADPKDYNC
WESLGEAYLSRGGYTTALKSFTRASELNPDSTYSVFKVAAIQQILGRYTEAIAQYQLIIE
KKEDYVPALKGLGECYLMMAKAALVDFLDGKGVDYVEKALEYFTWALQHRGDVSCLWKLA
GDACTSLHAVSPSKVRVRVLGVLLGQQEGREVLKKDELLHLGGRCYGRALKLMSTSNTWC
DLGINYYHQARHLAETGSNMNDLTELLQKSLHCLKKAVRLDSENHLYWNALGVVACYRGI
GNYALAQHCFIKSIQAEQINAAAWTNLGVLYLATENIEQAHEAFKMAQSLDPSYLLCWIG
QALIAERIGSYDTMDLFRHTTELSMHTEGAIGYAYWVCTTLQDKSNRETELYQYNILQMN
AVPAAQCVLCKYVGRIQNYAPAFSMLGYLNEHLQLKREAAEAYQRAAALLQSAEDQHTYN
VTVRNWGRLLCSIGEYDKAIQAFKLTPLEELEDLIGFALALFMKGLYKESNKAYERALSV
VKSEQDKAHILTALAITEYKQGKMDAAKSLLFKCSILKEPTTESLQALCALGLAVQDITL
SKAALNELLKHIKHKNDYHRCLLTSAIYALQGRTVAVQRQVSKAVHSNPADPALWSLLSR
VVAQYTQRNAKGGAVAGSVAHILDSNHGKKALLYTAVNQLAMGSSTAAEENIALKTIQKA
AFLSPDDPAVWAGLMAACHADDKLALVSHSQPKRVDPYLALLSAVSASLKNTEILKSYNQ
SLEKWSLSQAVTGLVDTGKTSEAESLCTKNLKSNPDQPAVILLLRQVQCKSLLESQKPLP
DAVLEELQKTVMSNSTSVPAWQWLAQVYQSQGMMGAAEMCYRKSLQVASQQDSWSGKLSS
LLKLALLALEVCMANVSGDHWSSLVQEATSEALKVCFCPLAVFLQALLQFNRKMGARETR
RLLERVVYQPGYPSSIVSTARWYLLRHLYAKDDHELIDVLVKNAETHGDKRTLELNQKLS
TQ
NT seq
4689 nt
NT seq
+upstream
nt +downstream
nt
atgtctagcaaagaagtgaagactgctctaaaaagtgcaagagatgccatcagaaacaaa
gaatataaagaagctttgaaacattgcaagacagtgttaaaacaagagaaaaataactat
aatgcctgggtttttattggtgttgctgcagctgagctagagcagcctgagcaggcccag
ggtgcctataagaaagctgccgaactggagccagagcagctactcgcttggcaggggcta
gcaagtttgtacgagaagtgtaatcacgtaaatgctaaggatgatttacctgctgtttac
cagaagctgttggatctctatgaaagtgttgacaggcagaagtggtgtgatgtctgtagg
aagctcgtggatctgcatcaccaggaaaagaaatacctagaggtgtctcggacatggtat
aaattgataaagatacgtcaagaagatggagcagataaacaagagcttcatgagctgtgg
agaaaattgacacagttgctgtctgagaatatagaagatcagaataatgaaacacagcag
atgcttttaactgcctttgagaatgcactggacttagcagagagtattcccagtgaagat
caccaagtactttacaggcatttcattgagtgcttatccaaatttcctcacgaggcaact
aggttgaagaaggcctgtgaagaaatgataactatctatcctaccgctcagtatccacta
gaagtgatttgtttgtacttaattgagtcagggagtctgatagatgaaggacagcaatat
tgttgtaaattagtggaaatgaatccaaaaagcggtccaggcctcattggcttaggtgtt
aaagctttacaaaacaagaagtatgaagatgctgttaatcacctaaccgaaggcctgaaa
gaaagccctctctgcataactgcctggtgtcatctagcggaagcccaagtcaaaatgcac
agacccagggaagccattctttcttgcaatcaagctctgaagactatagataatgtcggt
gcgtcaggtgcccgtcttcatcagaggaatctttgtcttcgtctgaaagcagaagctctg
cttaaactctccgactgtgaatcttgggaggaagcagttcgcactcttggtcaggtttcg
gatgcagataagaccccaggactgctggttctccaaggcctggctcatctgaacatgggc
gctgtaggcgaggctatgaagatcatggaagaccttgtggcctctcaccctgacctagcc
aaggttcatgctcttcaggctgcggttcattttactaagaaggactacctgcaagcagaa
acatgtttcctgagagcacttgagaaagacccggaagttgctgactatcatttccagctt
gggttgacgtactggttgatgggtgaagaaacaaggacagataaagcaaaggctcttacc
cacttcctgaaggctgcgagactggatgcctacatgggtaaagctttctgctacctaggc
cattattaccgagatgtggctggagacagaagcagagcccgagggtgttacaggaaagct
tttgaattagatgacatggatgctgagtctggagctgcggcagttgacctcagtgtggag
ctggaagacatggaaactgctttaggtatcttaacagcagtaactcaaaaggcaagtgct
ggagcagcaaagtgggcctggcttaggcgaggactctactatttgaaagctggtcaacat
tctcaagcagtggctgatttacaggccgctttaagggcagacccaaaggactacaattgt
tgggagtcattaggagaggcatacttaagcagaggtggctatacaacagccttgaaatcc
ttcacaagagccagtgagctgaacccagactccacatacagtgtgtttaaagtggcagca
atacagcaaatcctgggcaggtacacggaggccattgctcagtatcagctgatcattgaa
aaaaaagaggactatgtacctgccttaaaaggattgggtgaatgctatctgatgatggcc
aaggcggccttagtggactttctggatggaaaaggtgttgactacgtggagaaagcactg
gaatatttcacttgggctctgcagcaccgaggcgatgtgtcttgcctgtggaagctcgct
ggggacgcctgcaccagtctgcatgctgtttcaccatctaaagtgcgtgtacgtgtctta
ggcgtccttcttggtcagcaagaaggaagagaagtattaaagaaagatgagctcctgcat
ctcggaggaaggtgttatggtcgagcattaaagttgatgtctacatcgaatacatggtgc
gatcttggaattaattactatcaccaagcacgacatttggcagaaactggcagcaacatg
aatgaccttacagagttactgcagaaatctttgcattgtctgaaaaaggcagtgagactg
gacagtgaaaatcacctatattggaacgcacttggtgtggttgcatgctaccgtggtatt
ggcaattatgcccttgctcagcactgtttcatcaaatcaatccaggcagaacaaattaat
gctgctgcttggaccaacttaggagtgctctaccttgcgactgaaaacattgagcaagct
catgaagctttcaaaatggctcagtcccttgatccatcttacttattgtgctggattgga
caagctcttattgcagagagaattggaagttacgacaccatggatctcttcaggcacact
acagagctcagtatgcatactgaaggagcaataggttatgcatattgggtttgtacaact
ttacaagataaaagcaacagagagacagagctttaccagtacaacatcctgcagatgaat
gctgtccctgcagcacagtgcgttctctgcaaatatgtgggaagaattcagaattacgct
ccagctttctcaatgttgggttatttaaacgagcatctgcagttgaagagggaagcagca
gaggcataccaaagggcagctgcgctgttacaatctgccgaagaccaacatacttacaat
gttacagtgagaaactggggcagattattatgctccattggtgaatatgacaaagctatc
caggcctttaagttaacgccccttgaggaactggaggacctcataggttttgcactggca
ttgtttatgaagggactatataaggagagcaacaaagcctatgagagagccttgagtgtt
gttaaatcagagcaagacaaagctcatattctgacagctctggcaataacagaatacaaa
caaggaaaaatggatgcagctaagtcgttgcttttcaaatgctctattttaaaggaaccg
accacagaaagccttcaagcactatgtgctctagggttggcagtgcaggacattacactg
tcaaaagcagcacttaatgagttgctgaagcatatcaaacacaaaaacgattatcacaga
tgccttctcacgtcagcaatttatgcactccagggccgcactgtggcagtgcaaaggcag
gtgtccaaggctgtccacagtaaccccgctgaccctgctctttggtccttgctatcgcga
gttgtggctcagtacactcaacggaatgcaaagggaggggctgtagctggcagtgtggct
catattctggattcaaatcatggaaagaaggcattgttatatactgcagtaaaccagttg
gccatgggaagcagtacagcagcagaggaaaatattgctctaaagaccattcaaaaggca
gcttttctttctccagatgaccctgctgtctgggctgggctgatggcagcctgccatgct
gatgataaactggctttggtcagccactcgcagccaaaaagagtagatccgtacttggca
ttgctttctgctgtgtctgcctcacttaagaacacggaaatcttgaaaagttacaaccag
tcacttgaaaagtggtctctctcacaagctgtcactggtctagtagacacaggaaaaaca
tctgaagctgagtctctgtgcacaaagaatttaaaaagtaaccctgatcagcccgctgta
atcttactgttaagacaagttcagtgtaaatcactcctggagtctcaaaagcccctcccc
gatgctgtgctggaagaactgcagaaaacagtcatgtccaattctacctctgttcctgcg
tggcagtggttggcacaggtgtatcagtcccaaggaatgatgggtgctgcagagatgtgt
tacagaaagagtctacaagtggcatcccaacaggacagctggagtgggaagctctccagt
ctgctgaagctggcactgctcgcgctggaagtgtgcatggctaatgtttcgggtgatcac
tggtcgtccttggttcaagaggccacaagtgaggccttgaaagtttgcttttgtcctctg
gctgtcttcttgcaagctttgttgcagttcaaccgtaagatgggagcaagagagacgcgg
agacttttggagagagtagtgtaccagcctggataccccagctcaattgtatcaactgca
cgttggtacctcttgagacacctctatgcgaaagatgaccatgagctcattgacgttttg
gtgaagaatgcggagactcacggtgataaaagaaccttggaactgaatcagaagctgtcc
acacagtga
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integrated database retrieval system
