Meriones unguiculatus (Mongolian gerbil): 110545824
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Entry
110545824 CDS
T05884
Symbol
Edc4
Name
(RefSeq) enhancer of mRNA-decapping protein 4 isoform X1
KO
K12616
enhancer of mRNA-decapping protein 4
Organism
mun
Meriones unguiculatus (Mongolian gerbil)
Pathway
mun03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mun00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
110545824 (Edc4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mun03019
]
110545824 (Edc4)
Messenger RNA biogenesis [BR:
mun03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
110545824 (Edc4)
mRNA degradation factors
5'-3' decay
Decapping complex
110545824 (Edc4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ge1_WD40
EDC4_C
WD40
WD40_WDHD1_1st
Beta-prop_WDR5
Beta-prop_EDC4L
Beta-prop_WDR3_1st
DUF445
Beta-prop_TEP1_2nd
Beta-prop_THOC3
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_HPS5
WDR55
Motif
Other DBs
NCBI-GeneID:
110545824
NCBI-ProteinID:
XP_021487874
LinkDB
All DBs
Position
10:complement(21858685..21871057)
Genome browser
AA seq
1413 aa
AA seq
DB search
MASCASIDIEDATQHLRDILKLDRPAGGEPGSGSNAESQRPSNTYNGDLNGLLVPDPLSS
GDGNSTSKPGIRTMPPINLQEKQVICLSGDDSSTCIGILAKEVEIVASSDSSISSKARGS
NKVKIQPVAKYDWEQKYYYGNLIAVSNSFLAYAIRAANNGSAMVRVISVSTSERTLLKGF
TGSVADLAFAHLNSPQLACLDEAGNLFVWRLALVKGKIQEEILVHIRQPEGTPLNHFRRI
IWCPFIPEESEDCCEESSPTVALLHEDRAEVWDLDMLRSSHNSWPVDVSQIKQGFIVVKG
HSTCLSEGALSPDGTVLATASHDGFVKFWQIYIEGQDEPRCLHEWKPHDGRPLSCLLFCD
NHKKQDPEVPFWRFLITGADQNRELKMWCTVSWTCLQTIRFSPDIFSSVSVPPSLKVCLD
LSAEYLILSDVQRKVLYVMELLQNQDEGRACFSSISEFLLTHPVLSFGIQVVSRCRLRHT
EVLPAEEENDSLGAESSHGAGALESAAGVLIKLFCVHTKALQDVQIRFQPQLNPDVVAPL
PTHTAHEDFTFGESRPELGSEGLASAAHGSQPDLRRIVELPAPADFLSLSSETKPKLMTP
DAFMTPTASLQQISASPSSSSSSSSSSSSSSSSSSSSSSLTAVSAVSSSSAMDPSLPSRP
PEELTLSPKLQLDGSLTINSSSSLQASPRSLLPGLLPGPTDKLTPKGPGQVSTSASALSL
DLQEVEPLGLPQASPSRTRSPDVISSASTALSQDIPEIASEALSRGFGSSVPEGLIEPDS
MASAASALHLLSPRPRQGPELGSQLGLDGGPGDGDRHNTPSLLEAALTQEVATPDSQVWP
TAPDITRETCSTLTESPRNGLQEKHKSLAFHRPPYHLLQQHDSQDTSAEQSDHDDEVASL
ASASGGFGSKIPAPRLPVKDWKTKGSPRTSPKLKRKSKKDDGDSTVGSRLTEHQVAEPPE
DWPALLWQQQRELAELWHNQEELLQRLCAQLEGLQSTVTDHVERALETRHEQEQQRLERA
LAEGQQRGGQLQEQLTQQLSQALSSAVAGRLERSIRDEIKKTVPPCVSRSLEPVAGQLSN
SVATKLTAVEGSMKENISKLLKSKNLTDAIARAAADTLQGPMQAAYREAFQSVVLPAFEK
SCQAMFQQINDSFRLGTQEYLQQLESHMKSRKAREQEAREPVLAQLRGLVSTLQSATEQM
AATVSSSVRAEVQHQLHVAVGSLQESILAQVQRIVKGEVSVALKEQQATVTSSIMQAMRS
AAGTPVPSAHLDCQAQQAHILQLLQQGHLNQAFQQALTAADLNLVLYVCETVDPAQVFGQ
PPCPLSQPVLLSLIQQLASDLGTRSDLKLSYLEEAVMHLDHSDPITRDHMGSVMAQVRQK
LFQFLQADPHNSLGKAARRLSLMLHGLVTPSLP
NT seq
4242 nt
NT seq
+upstream
nt +downstream
nt
atggcctcctgcgcgagcatcgacattgaggacgccacgcagcatctgcgggacattctc
aaactggaccggcccgccggaggtgagccgggatcgggctccaatgcagagagccaaagg
ccatctaatacctacaatggagaccttaatggcctcctggtcccagatccactcagttca
ggtgatggtaactcaacaagcaaacctggtatacggaccatgccacccattaacctgcag
gaaaagcaggtcatttgcctctcgggggatgacagctccacttgcattgggattttggcc
aaggaggtggaaattgtggccagcagtgattctagcatttccagcaaggctcggggaagc
aacaaggtgaaaatccagcctgtcgccaagtatgactgggaacagaaatactactatggc
aatctgattgcagtgtcaaactccttcttggcatatgccattagggctgccaacaacggc
tcagcaatggttcgcgtgatcagcgtcagcacttcagagcgcaccttgctcaagggtttc
acgggcagtgtggctgatctggcttttgcacacctcaactctccacagcttgcctgcctg
gatgaggctggcaatctttttgtgtggcgcttggctctggttaagggtaaaattcaagaa
gagattttggtccatatccggcagccagagggcacgccactgaaccacttccgaaggatc
atctggtgccccttcatccctgaggaaagtgaggactgttgtgaggaaagtagcccaaca
gtggccctccttcatgaagaccgggctgaagtgtgggacctggatatgcttcgctccagc
cacaacagctggcctgtggatgtcagccaaatcaagcagggcttcattgtggtaaaaggc
catagcacgtgcctgagtgaaggagccctctcccctgatgggactgtcctggctaccgca
agccatgatggctttgtcaagttctggcagatctacattgaaggtcaggatgagccaagg
tgtctgcatgaatggaagcctcatgatgggcggcccctttcttgcctcctgttctgtgac
aaccataagaaacaggatcctgaagtcccattctggaggttcctcattactggtgctgac
cagaatcgggagctgaaaatgtggtgcacagtgtcctggacctgtctgcaaaccattcgc
ttctctccagatatcttcagctcagtgagtgtacctcccagcctcaaagtttgcttggac
ctctcagcagagtatctgattcttagtgacgtgcaacgaaaggtcctctatgtgatggag
ctgctgcagaaccaagatgagggccgtgcttgtttcagttccatctctgagttcctgctc
acccaccctgtgctgagctttggcatccaggttgtgagtcgctgccggctgcggcacact
gaggtgctgcctgctgaggaggagaatgacagtctgggggctgagagttcccatggagct
ggtgccttggaatctgcagctggtgtgcttatcaaactcttttgtgtccatactaaggca
ctacaagatgtgcagatccgcttccagccacagctgaaccctgacgtggtggctccactc
cctacccacactgctcacgaggacttcacatttggagagtctcgacctgaactaggctct
gaggggctagcttcagctgctcatgggtcccagcctgacctccggcgcattgtggaactg
cctgcacctgcagacttcctcagtctgagcagtgagaccaagcctaagttgatgacacct
gatgctttcatgacacctaccgcttccctgcagcagatctctgcatcccctagcagcagc
agtagcagcagcagcagcagcagcagtagtagcagcagcagcagcagcagcagctctcta
acagctgtgtctgctgtgagcagctcctcagccatggacccctccttgcccagtaggcca
cctgaggagctgaccttgagccccaagctgcagctagatggcagcctgacaataaacagc
agcagcagcctgcaggcaagcccacgaagcctccttcctggcctgctcccaggcccaact
gacaaattgactcccaaaggacctgggcaggtatctacttctgcctctgcactatccttg
gatttgcaggaagtggagcctttagggctaccccaggcctccccaagtcgcacccgttcc
cctgatgtgatttcctcagcatccactgccctgtcccaggacatccctgaaattgcctct
gaggccctatcccgtggctttggctcctctgttcctgagggcctcattgagccagacagt
atggcttcagctgcctcagcactacacttactgtctcctcggcccaggcaaggccctgag
cttggctctcaacttggcctggatggaggtcctggggatggggatcggcataatactccc
tccctacttgaagcagccttgacccaggaggttgcaacccctgacagtcaagtctggcct
acagcacctgacattactcgggagacctgtagtacactgacagaaagccccaggaatggc
ctccaggaaaagcacaaaagcctggccttccacaggccaccttaccacctcctacagcaa
catgacagccaggacaccagtgctgagcaaagtgaccatgatgatgaagttgccagcctt
gcctctgcctcaggaggttttggcagcaaaattcctgctccacggttgccagtcaaggat
tggaagaccaagggatcccctcggacttcacccaagctcaagaggaaaagcaagaaggat
gatggggattcaactgtgggatcccggctcaccgagcaccaggtggcagagccccctgag
gactggccagcactgctttggcagcagcaaagagagctggcagagctatggcacaaccaa
gaggagctgctacagcgtctttgtgcccaacttgaaggtctacagagcactgtcactgac
catgtagaacgagccctggagacacggcatgaacaagagcagcagcggctggagcgggca
ctggctgaggggcagcaacggggtgggcagctacaggagcagctgacgcagcagctatcc
caggcattgtcttcagctgtggctgggcggctagaacgtagcataagggatgaaatcaag
aagacggttcctccatgtgtttctagaagtctggagcctgtggcaggccaactaagcaac
tcagtggctaccaagcttacagctgtggaagggagcatgaaagaaaatatctctaagcta
ctcaagtccaagaacttgacagatgccattgctcgagcagctgcagacactttgcaggga
ccaatgcaggctgcttaccgggaagccttccagagtgtggtactgccagcttttgagaag
agttgccaggctatgttccagcaaatcaatgacagctttagactgggcacgcaggaatat
ttgcagcagctagagagtcacatgaagagcaggaaggcacgtgaacaggaagctagggag
cctgtgctggctcaacttcggggcctggtcagcactctgcagagtgccactgagcagatg
gcagccactgtgtctagcagtgttcgggctgaggtgcaacaccagctgcatgtggctgtg
ggcagcttgcaggagtcaattttagcacaagttcaacgcattgttaagggtgaagtaagt
gtggcacttaaggagcaacaggccactgtcacctccagcatcatgcaggccatgcgttca
gctgctggcacacctgtcccctctgcccaccttgactgccaggcccaacaagcccacatc
ttgcagttactgcagcagggccacctcaatcaggccttccagcaggcactgactgcagct
gatctcaacctggtgctgtatgtgtgtgaaactgtggatccagcccaggtttttgggcag
ccgccctgtccactatcccagcctgttctcctttccctaatccagcagctggcatctgac
cttggaactagaagtgacctcaaactcagctacttggaagaggctgtgatgcacctggac
cacagcgaccccatcaccagagaccacatgggctctgtcatggcccaggtgcgccagaag
ctcttccagttcctgcaggctgatcctcacaactcactcggcaaagctgctcgtcgtctc
agcctcatgctgcatggccttgtgactccaagcctcccttag
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