Meriones unguiculatus (Mongolian gerbil): 110546356
Help
Entry
110546356 CDS
T05884
Symbol
Col6a1
Name
(RefSeq) LOW QUALITY PROTEIN: collagen alpha-1(VI) chain
KO
K06238
collagen type VI alpha
Organism
mun
Meriones unguiculatus (Mongolian gerbil)
Pathway
mun04151
PI3K-Akt signaling pathway
mun04510
Focal adhesion
mun04512
ECM-receptor interaction
mun04518
Integrin signaling
mun04820
Cytoskeleton in muscle cells
mun04974
Protein digestion and absorption
mun05165
Human papillomavirus infection
Brite
KEGG Orthology (KO) [BR:
mun00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
110546356 (Col6a1)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
110546356 (Col6a1)
04518 Integrin signaling
110546356 (Col6a1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
110546356 (Col6a1)
09142 Cell motility
04820 Cytoskeleton in muscle cells
110546356 (Col6a1)
09150 Organismal Systems
09154 Digestive system
04974 Protein digestion and absorption
110546356 (Col6a1)
09160 Human Diseases
09172 Infectious disease: viral
05165 Human papillomavirus infection
110546356 (Col6a1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
mun04147
]
110546356 (Col6a1)
00536 Glycosaminoglycan binding proteins [BR:
mun00536
]
110546356 (Col6a1)
Exosome [BR:
mun04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
110546356 (Col6a1)
Glycosaminoglycan binding proteins [BR:
mun00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
110546356 (Col6a1)
Hyaluronan
Extracellular matrix or blood plasma proteins
110546356 (Col6a1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VWA
Collagen
VWA_2
VWA_3
Motif
Other DBs
NCBI-GeneID:
110546356
NCBI-ProteinID:
XP_021488807
LinkDB
All DBs
Position
16:9449280..9465635
Genome browser
AA seq
1035 aa
AA seq
DB search
MVTRRPARNMRLARALLPLLLQAFWVAAQDIQGPKVIAYQDCPVDLFFVLDTSESVALRL
IPYGALVDKVKSFTKRFIDNLRDRYYRCDRNLVWNAGALHYSDEVEIIQGLTRMPSGRDA
LKASVDAVKYFGKGTYTDCAIKKGLEELLIGGSHLKENKYLIVVTDGHPLEGYKEPCGGL
EDAVNEAKHLGIKVFSVAITPDHLEPRLSIIATDHTYRRNFTAADWGQSRDAEETISQTI
ETIVDMIKNNVEQVCCTFECQAARGPPGPRGDPGYEGERGKPGLPGEKGEAGDPGRPGDL
GPVGYQGMKGEKGSRGEKGSRGPKGYKGEKGKRGIDGVDGMKGETGYPGLPGCKGSPGFD
GIQGPPGPKGDAGAFGLKGEKGEAGADGEAGRPGSSGPPGDEGSPGEPGPPGEKGEAGDE
GNAGPDGPPGERGGPGERGPRGTPGVRGPRGDPGEAGPQGDQGREGPIGIPGDSGDPGPI
GPKGYRGDEGPPGPEGPRGAPGPAGPPGDPGLMGERGEDGPPGNGTEGFPGFPGYPGNRG
PPGINGTKGYPGLKGDEGEVGDPGEDNNDISPRGAKGAKGYRGPEGPQGPPGHVGPPGPD
ECEILDIIMKMCSCCECTCGPIDILFVLDSSESIGLQNFEIAKDFIIKVIDRLSRDELVK
FEPGQSHAGVVQYSHNQMQEHVDMRSPNIRSAQDFKEAVKKLQWMAGGTFTGEALQYTRD
RLLPPTQNNRIALVITDGRSDTQRDTTPLTVLCGSDIQVVSVGIKDVFGFVAGSDQLNDI
SCQGPVSQGRPGISLVKENYAELLDDGFLKNITAQICIDKKCPDYTCPITFSSPADITIL
LDGSASVGSHNFETTKVFAKRLAERFLSAGRTDPSQDVRVAVVQYSGLGQQQPGRAALQF
LQNYTVLASSVDSMDFINDATDVNDALSYVTRFYREASSGATKKRVLLFSDGNSQGATAE
AIEKAVQEAQRAGIEIFVVVVGPQVNEPHIRVLVTGKTAEYDVAFGERHLFRVPNYQALL
RGVLYQTVSRKVALG
NT seq
3108 nt
NT seq
+upstream
nt +downstream
nt
atggtgacccgcaggccagccagaaacatgaggctggcccgcgctctgctgcccctgctg
ctgcaggccttttgggtggctgctcaggacatccagggccccaaagtgatcgcctaccaa
gactgccctgtggatctattctttgtgctggacacctcggaaagcgtggccttgaggctg
ataccctatggggccctggtggacaaggtgaagtccttcaccaagcgcttcatcgataac
ctgagagacaggtactatcggtgtgaccgcaacctggtttggaatgcgggagccctgcac
tacagtgacgaagtggagatcatccaaggcctcacgcgcatgcccagtggccgcgatgcg
ctcaaggctagcgtcgatgctgtcaagtacttcggcaaaggcacctacactgactgtgct
attaagaagggtctggaggagctgctcatagggggttcccacctgaaggagaacaaatat
ctgatcgtggtgacggatgggcatcctctggagggctacaaggaaccgtgcgggggcctg
gaagatgcagtcaatgaggccaaacacctgggcatcaaagtcttctctgtggccatcacg
ccggaccacctagagccgcgtctaagcatcattgccacggaccacacctaccggcgcaac
ttcacagcagctgactgggggcagagccgagacgcagaggaaaccatcagccagaccatc
gaaaccattgtggacatgattaaaaataacgtggagcaagtgtgctgtacctttgaatgc
caggctgccagaggacctccagggccccgaggagaccctgggtatgagggggaacgagga
aagccgggtcttcccggagagaaaggagaagccggagaccctggacgacccggggatctt
ggaccagtcgggtaccagggtatgaagggagaaaaaggaagccgtggagagaagggctcc
agaggacctaagggctacaagggtgagaaaggcaagcgtggcattgacggagtagatggc
atgaagggggagacagggtacccaggactaccaggctgcaaaggctcgccaggattcgat
ggcattcaaggaccaccaggtcccaagggtgatgctggtgccttcggactgaaaggagaa
aagggtgaagctggagcagatggtgaggctgggagaccagggagctcagggccacctgga
gacgagggttcaccgggagagcctggtccccccggagagaaaggagaggccggtgatgag
gggaatgctggcccggatggtccccctggagagaggggtggccccggtgaaagaggacct
cggggaacccctggtgtgaggggcccaaggggagacccgggtgaagctggaccacaaggt
gaccaaggaagagaaggccccattggcatccccggagattcgggtgatcctggccccatt
ggacctaaaggataccgaggcgatgagggtcctccaggcccggagggtcctagaggagcc
ccaggacctgctgggccccctggagacccaggactgatgggtgaaaggggtgaagacggt
ccacccggaaatggcacagaaggttttcccggcttccctggatacccaggcaacagaggt
ccccctggaataaatggcacaaaaggctaccctggcctcaagggggatgagggtgaagtc
ggagaccccggagaggataacaatgacatttcaccccgtggggccaaaggggcaaagggg
taccgaggcccagaaggaccccagggacctccaggacatgtgggaccacctgggccagat
gagtgcgagattttggatatcatcatgaaaatgtgctcctgctgtgagtgcacatgcggc
cccattgacatcctcttcgtactggacagctctgagagcattggcctacagaactttgag
attgccaaggacttcattatcaaggtcattgaccgcctgagcagggatgagctggtcaag
tttgagccagggcagtcacatgcgggcgtggtccagtacagccacaaccagatgcaagag
cacgtggacatgcggagccccaacatccgtagtgcccaggacttcaaagaagccgtcaag
aagctacagtggatggccggtggcacgttcacaggagaagccctgcagtacacccgggac
cgactgcttccgcccacccagaacaaccgaatcgctctggtcatcacagatggacgctct
gacactcagcgggacacaacacccctcactgtgctctgtggctcagacattcaggtagtt
tccgtgggcatcaaggatgtgttcggctttgtcgcgggctccgaccagctcaatgacatt
tcctgccaaggtccagtgtcacaaggccgtcctggtatctccctggtgaaggagaactat
gcagagcttctagacgatggatttctgaagaacatcacagcccagatctgcatagataag
aagtgtccggattatacctgtccaatcacattctcctccccggctgacatcaccatcctg
ctagatggctcagccagtgtcggcagccacaactttgaaaccaccaaggtcttcgccaag
cgcctcgctgagcgattcctgtcagcaggcaggacggatccctcccaggatgtgcgggtg
gccgtggtacagtacagtggcctaggccagcagcagccggggcgggcagctcttcagttc
ttgcagaactacacagtgctggccagctccgtggacagcatggatttcatcaatgacgcc
acggacgtcaacgacgccttgagctatgtaactcgtttctaccgggaggcctcatcaggt
gccaccaagaagagagtgctcttgttctcagacggcaactcgcagggggccaccgcggag
gccatcgagaaggctgtgcaggaggcccagcgggcaggcattgagatctttgtggtggtg
gtgggaccccaggtgaatgagccccacatccgcgtgctcgtcactggcaagaccgcagag
tacgacgtggcctttggtgagcgccacctattccgtgtaccaaactaccaggccctgctt
cgtggtgtgctctaccagacagtctccaggaaggtggcactgggctaa
DBGET
integrated database retrieval system
